Contig 000160:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014D21Sequence547000160 (3)ref|XP_009619467.1|1e-69PREDICTED: NAC domain-containing protein 78-like [Nicotiana tomentosiformis]768005375 (2)gb|AAM34767.1|AF509867_11e-99nam-like protein 4 [Petunia x hybrida]
JMFF028E07Sequence498000160 (3)ref|XP_009619467.1|2e-53PREDICTED: NAC domain-containing protein 78-like [Nicotiana tomentosiformis]645005375 (2)ref|XP_009619467.1|3e-72PREDICTED: NAC domain-containing protein 78-like [Nicotiana tomentosiformis]
JMFF028G02Sequence461000160 (3)ref|XP_009619467.1|3e-70PREDICTED: NAC domain-containing protein 78-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF028G02+                                                               GTCCACAA
JMFF014D21+                                                                TCCACAA
                      ____________________________________________________________
consensus                                                                 GTCCACAA
 
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JMFF028G02+           TGGAAAACGAGCGTTTTCTTCATTCCTACTGTCTGAGACTTATGACGGACAGGACGATCC
JMFF014D21+           TGGAAAACGAGCGTTTTCTTCATTCCTACTGTCTGAGACTTATGACGGACAGGACGATCC
JMFF028E07+                                                                  GATCC
                      ____________________________________________________________
consensus             TGGAAAACGAGCGTTTTCTTCATTCCTACTGTCTGAGACTTATGACGGACAGGACGATCC
 
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JMFF028G02+           TTCCCAGTGGCCTTCCAATAGCCTTTACCAGTGGCTCTGTTGAGCCGAGACCCATTCCCG
JMFF014D21+           TTCCCAGTGGCCTTCCAATAGCCTTTACCAGTGGCTCTGTTGAGCCGAGACCCATTCCCG
JMFF028E07+           TTCCCAGTGGCCTTCCAATAGCCTTTACCAGTGGCTCTGTTGAGCCGAGACCCATTCCCG
                      ____________________________________________________________
consensus             TTCCCAGTGGCCTTCCAATAGCCTTTACCAGTGGCTCTGTTGAGCCGAGACCCATTCCCG
 
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JMFF028G02+           TACTTACGATCTACAGGGCTAAAAAAGTACCATTCTAGATCTCTAGTCTTCAGATGTGAA
JMFF014D21+           TACTTACGATCTACAGGGCTAAAAAAGTACCATTCTAGATCTCTAGTCTTCAGATGTGAA
JMFF028E07+           TACTTACGATCTACAGGGCTAAAAAAGTACCATTCTAGATCTCTAGTCTTCAGATGTGAA
                      ____________________________________________________________
consensus             TACTTACGATCTACAGGGCTAAAAAAGTACCATTCTAGATCTCTAGTCTTCAGATGTGAA
 
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JMFF028G02+           TATCCTGCGAGTTCCCACGGTTCAGATTTGTAGACGTCGATTTCAGAAACAGCTTGAAAG
JMFF014D21+           TATCCTGCGAGTTCCCACGGTTCAGATTTGTAGACGTCGATTTCAGAAACAGCTTGAAAG
JMFF028E07+           TATCCTGCGAGTTCCCACGGTTCAGATTTGTAGACGTCGATTTCAGAAACAGCTTGAAAG
                      ____________________________________________________________
consensus             TATCCTGCGAGTTCCCACGGTTCAGATTTGTAGACGTCGATTTCAGAAACAGCTTGAAAG
 
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JMFF028G02+           CGGAAAGATTTGCCGCATGCCCGGCGTCGGAGGTAGTACCTTACGAGCTCCTCGTCCGTT
JMFF014D21+           CGGAAAGATTTGCCGCATGCCCGGCGTCGGAGGTAGTACCTTACGAGCTCCTCGTCCGTT
JMFF028E07+           CGGAAAGATTTGCCGCATGCCCGGCGTCGGAGGTAGTACCTTACGAGCTCCTCGTCCGTT
                      ____________________________________________________________
consensus             CGGAAAGATTTGCCGCATGCCCGGCGTCGGAGGTAGTACCTTACGAGCTCCTCGTCCGTT
 
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JMFF028G02+           GGGTGAAACCGGAACCCGGGCGCGAGCGACGTCGGCGGCGCCAACGTCCGTTTCGGAGGC
JMFF014D21+           GGGTGAAACCGGAACCCGGGCGCGAGCGACGTCGGCGGCGCCAACGTCCGTTTCGGAGGC
JMFF028E07+           GGGTGAAACCGGAACCCGGGCGCGAGCGACGTCGGCGGCGCCAACGTCCGTTTCGGAGGC
                      ____________________________________________________________
consensus             GGGTGAAACCGGAACCCGGGCGCGAGCGACGTCGGCGGCGCCAACGTCCGTTTCGGAGGC
 
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JMFF028G02+           GCCGGCGCCGGCGGCGCCACCACCAAAGCTCCTCCCTCCTGCGCCGGTTGTTGCTCCATC
JMFF014D21+           GCCGGCGCCGGCGGCGCCACCACCAAAGCTCCTCCCTCCTGCGCCGGTTGTTGCTCCATC
JMFF028E07+           GCCGGCGCCGGCGGCGCCACCACCAAAGCTCCTCCCTCCTGCGCCGGTTGTTGCTCCATC
                      ____________________________________________________________
consensus             GCCGGCGCCGGCGGCGCCACCACCAAAGCTCCTCCCTCCTGCGCCGGTTGTTGCTCCATC
 
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JMFF028G02+           ATTCCCAAATCAAACAACAACCCAACCCAACCC                           
JMFF014D21+           ATTCCCAAATCAAACAACAACCCAACCCAACCCAAGAAACTCTAACGCATAGAGATTGAT
JMFF028E07+           ATTCCCAAATCAAACAACAACCCAACCCAACCCAAGAAACTCTAACGCATAGAGATTGAT
                      ____________________________________________________________
consensus             ATTCCCAAATCAAACAACAACCCAACCCAACCCAAGAAACTCTAACGCATAGAGATTGAT
 
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JMFF014D21+           ATATAAACACAAGTTAGGTTTGAGATGATTAGAAGTGAAGCAAAGCTGGAGAGAGAGAGT
JMFF028E07+           ATATAAACACAAGTTAGGTTTGAGATGATTAGAAGTGAAGCAAAGCTGGAGAGAGAGAGT
                      ____________________________________________________________
consensus             ATATAAACACAAGTTAGGTTTGAGATGATTAGAAGTGAAGCAAAGCTGGAGAGAGAGAGT