| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005M03 | Sequence | 529 | 000157 (6) | gb|KJB51998.1| | 9e-65 | hypothetical protein B456_008G258800 [Gossypium raimondii] gb|KJB52000.1| hypoth | 694 | 000157 (6) | ref|XP_009358713.1| | 4e-89 | PREDICTED: mediator of RNA polymerase II transcription subunit 10b-like [Pyrus |
| JMFF028D01 | Sequence | 536 | 000157 (6) | gb|KJB51998.1| | 2e-49 | hypothetical protein B456_008G258800 [Gossypium raimondii] gb|KJB52000.1| hypoth | 636 | 000157 (6) | ref|NP_001241316.1| | 2e-57 | uncharacterized protein LOC100806084 [Glycine max] ref|XP_006601827.1| PREDICTED |
| JMFN033L13 | Sequence | 513 | 000157 (6) | ref|XP_006360992.1| | 6e-74 | PREDICTED: mediator of RNA polymerase II transcription subunit 10b-like [Solanu | |||||
| JMFS014F09 | Sequence | 624 | 000157 (6) | ref|XP_006439221.1| | 2e-82 | hypothetical protein CICLE_v10022441mg [Citrus clementina] gb|ESR52461.1| hypoth | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF028D01- AAACGGGTGTGCACGGCACATAGGCAGGGCATCGTTCTGTAAATCTTTTTCAAC
JMFN033L13+ C
rJMFF005M03- C
____________________________________________________________
consensus AAACGGGTGTGCACGGCACATAGGCAGGGCATCGTTCTGTAAATCTTTTTCAAC
. : . : . : . : . : . :
rJMFF028D01- GCCACAAACACGTTCGATGAAAGACCTATCGAGTCGCATCTTAACAGTATACACAGACTT
JMFN033L13+ GCCACAAACATGTTCGATGAAAGACCTATCGAGTCGCATCTTAACAGTATACACAGACTT
rJMFF005M03- GCCACAAACATGTTCGATGAAAGACCTATCGAGTCGCATCTTAACAGTATACACAGACTT
____________________________________________________________
consensus GCCACAAACATGTTCGATGAAAGACCTATCGAGTCGCATCTTAACAGTATACACAGACTT
. : . : . : . : . : . :
rJMFF028D01- TAAAACAACGGTCCAGAAGTGAATAAACTGTTGTAAAGGAAGGCCTCGATTTTCACATTT
JMFN033L13+ TAAAACAACGGTCCAGAAGTGAATAAACTGTTGTAAAGGAAGGCCTCGATTTTCACATTT
rJMFF005M03- TAAAACAACGGTCCAGAAGTGAATAAACTGTTGTAAAGGAAGGCCTCGATTTTCACATTT
____________________________________________________________
consensus TAAAACAACGGTCCAGAAGTGAATAAACTGTTGTAAAGGAAGGCCTCGATTTTCACATTT
. : . : . : . : . : . :
rJMFF028D01- CTGGCTTCACCTTCACGTCGCCATTTGGTAATGCGTTTTGTGCTTGGGCCAACTGTTTTG
JMFN033L13+ CTGGCTTCACCTTCACGTCGCCATTTGGTAATGCGTTTTGTGCTTGGGCCAACTGTTTTG
rJMFF005M03- CTGGCTTCACCTTCACGTCGCCATTTGGTAATGCGTTTTGTGCTTGGGCCAACTGTTTTG
JMFS014F09+ ACGTCGCCATTTGGTAATGCGTTTTGTGCTGGGCCCAACTGTTNTG
____________________________________________________________
consensus CTGGCTTCACCTTCACGTCGCCATTTGGTAATGCGTTTTGTGCTTGGGCCAACTGTTTTG
. : . : . : . : . : . :
rJMFF028D01- CTTCTGCTGCAGAAGTTGCACGACTCATCCTATAAGCTTCCACTTCATCAGGAAATGCCT
JMFN033L13+ CTTCTGCTGCAGAAGTTGCACGACTCATCCTATAAGCTTCCACTTCATCAGGAAATGCCT
rJMFF005M03- CTTCTGCTGCAGAAGTTGCACGACTCATCCTATAAGCTTCCACTTCATCAGGAAATGCCT
JMFS014F09+ CTTCTGCTGCAGAAGTTGCACGACTCATCCTATAAGCTTCCACTTCATCAGGAAATGCCT
____________________________________________________________
consensus CTTCTGCTGCAGAAGTTGCACGACTCATCCTATAAGCTTCCACTTCATCAGGAAATGCCT
. : . : . : . : . : . :
rJMFF028D01- CTTCAAGTTCATCCAAAAGATGCTTCCGCAAACCCTTGAAAGCATCTGTTTTTCCTTTGG
JMFN033L13+ CTTCAAGTTCATCCAAAAGATGCTTCCGCAAACCCTTGAAAGCATCTGTTTTTCCTTTGG
rJMFF005M03- CTTCAAGTTCATCCAAAAGATGCTTCCGCAAACCCTTAAAAGCATCTGTTTTTCCTTTGG
JMFS014F09+ CTTCAAGTTCATCCAAAAGATGCTTCCGCAAACCCTTGAAAGCATCTGTTTTTCCTTTGG
JMFF005M03+ AGTTCATCCAAAAGATGCTTCCGCAAACCCTTAAAAGCATCTGTTTTTCCTTTGG
JMFF028D01+ CAAGTTCATCCAAAAGATGCTTCCGCAAACCCTTGAAAGCATCTGTTTTTCCTTTGG
____________________________________________________________
consensus CTTCAAGTTCATCCAAAAGATGCTTCCGCAAACCCTTGAAAGCATCTGTTTTTCCTTTGG
. : . : . : . : . : . :
rJMFF028D01- TAATCTGA-TTTTGGCAATGCAACTATTCAAAACATCCCTAGTAAACTCATCTGGATTCT
JMFN033L13+ TAATCTGATTTTTGGCAATGCAACTATTCAAAACATCCCTAGTAAACTCATCTGGATTCT
rJMFF005M03- TAATCTGATTTTTGGCAATGCAACTATTCAAAACATCCCTAGTAAACTCATCTGGATTCT
JMFS014F09+ TAATCTGATTTTTGGCAATGCAACTATTCAAAACATCCCTAGTAAACTCATCTGGATTCT
JMFF005M03+ TAATCTGATTTTTGGCAATGCAACTATTCAAAACATCCCTAGTAAACTCATCTGGATTCT
JMFF028D01+ TAATCTGA-TTTTGGCAATGCAACTATTCAAAACATCCCTAGTAAACTCATCTGGATTCT
____________________________________________________________
consensus TAATCTGATTTTTGGCAATGCAACTATTCAAAACATCCCTAGTAAACTCATCTGGATTCT
. : . : . : . : . : . :
rJMFF028D01- TCCCATCATCAATTAAACTGAGAACCTCCATGGGCACCTGAATATCACACTTCTCTGCTA
JMFN033L13+ TCCCATCATCAATTAAACTGAGAACCTCCATGGGCACCTGAATATCACACTTCTCTGCTA
rJMFF005M03- TCCCATCATCAATTAAACTGAGAACCTCCATGGGCACCTGAATATCACACTTCTCTGCTA
JMFS014F09+ TCCCATCATCAATTAAACTGAGAACCTCCATGGGCACCTGAATATCACACTTCTCTGCTA
JMFF005M03+ TCCCATCATCAATTAAACTGAGAACCTCCATGGGCACCTGAATATCACACTTCTCTGCTA
JMFF028D01+ TCCCATCATCAATTAAACTGAGAACCTCCATGGGCACCTGAATATCACACTTCTCTGCTA
____________________________________________________________
consensus TCCCATCATCAATTAAACTGAGAACCTCCATGGGCACCTGAATATCACACTTCTCTGCTA
. : . : . : . : . : . :
rJMFF028D01- ATTTCGCCAAATTATCAAGCTCCAACACAAGAGCGTTCATGCGCTGGAGAAATGGAAGCT
JMFN033L13+ ATTTCGCCAAATTATCAAGCTCCAACACAAGAGCGTTCATGCGCTGGAGAAATGGAAGCT
rJMFF005M03- ATTTCGCCAAATTATCAAGCTCCAACACAAGAGCGTTCATGCGCTGGAGAAATGGAAGCT
JMFS014F09+ ATTTCGCCAAATTATCAAGCTCCAACACAAGAGCGTTCATGCGCTGGAGAAATGGAAGCT
JMFF005M03+ ATTTCGCCAAATTATCAAGCTCCAACACAAGAGCGTTCATGCGCTGGAGAAATGGAAGCT
JMFF028D01+ ATTTCGCCAAATTATCAAGCTCCAACACAAGAGCGTTCATGCGCTGGAGAAATGGAAGCT
____________________________________________________________
consensus ATTTCGCCAAATTATCAAGCTCCAACACAAGAGCGTTCATGCGCTGGAGAAATGGAAGCT
. : . : . : . : . : . :
rJMFF028D01- GGGAGGCGGCGTTGAAGGAAGAGACGGTGAGATAGAGTTGGTGGAGCATCCCTAGGGTTT
JMFN033L13+ GGGAGGCGGCGTTGAAGGAAGAGACGGTGAGA
rJMFF005M03- GGGAGGCGGCGTTGAAGGAAGAGACGGTGAGATAGAGTTGGTGGAGCATCCCTAGGGTTT
JMFS014F09+ GGGAGGCGGCGTTGAAGGAAGAGACGGTGAGATAGAGTTGGTGGAGCATCCCTAGGGTTT
JMFF005M03+ GGGAGGCGGCGTTGAAGGAAGAGACGGTGAGATAGAGTTGGTGGAGCATCCCTAGGGTTT
JMFF028D01+ GGGAGGCGGCGTTGAAGGAAGAGACGGTGAGATAGAGTTGGTGGAGCATCCCTAGGGTTT
____________________________________________________________
consensus GGGAGGCGGCGTTGAAGGAAGAGACGGTGAGATAGAGTTGGTGGAGCATCCCTAGGGTTT
. : . : . : . : . : . :
rJMFF028D01- TCTGTATGGAGCTGATGACTTGGTTGAGATTCTGCTTGGAATC
rJMFF005M03- TCTGTATGGAGCTGATGACTTGGTTGAGATTCTGCTTGGAATCGTCCGCCGGTGAGCCGG
JMFS014F09+ TCTGTATGGAGCTGATGACTTGGTTGAGATTCTGCTTGGAATCGTCCGCCGGTGAGCCGG
JMFF005M03+ TCTGTATGGAGCTGATGACTTGGTTGAGATTCTGCTTGGAATCGTCCGCCGGTGAGCCGG
JMFF028D01+ TCTGTATGGAGCTGATGACTTGGTTGAGATTCTGCTTGGAATCGTCCGCCGGTGAGCCGG
____________________________________________________________
consensus TCTGTATGGAGCTGATGACTTGGTTGAGATTCTGCTTGGAATCGTCCGCCGGTGAGCCGG
. : . : . : . : . : . :
rJMFF005M03- TGGTGGCCGACGCTGATGAGTCGGCGGGCGAGGCAACGTTCGACATCGGGAGTATGACAC
JMFS014F09+ TGGTGGCCGACGCTGATGAGTCGGCGGGCGAGGCAACGTTCGACATCGGGAGTATGACAC
JMFF005M03+ TGGTGGCCGACGCTGATGAGTCGGCGGGCGAGGCAACGTTCGACATCGGGAGTATGACAC
JMFF028D01+ TGGTGGCCGACGCTGATGAGTCGGCGGGCGAGGCAACGTTCGACATCGGGAGTATGACAC
____________________________________________________________
consensus TGGTGGCCGACGCTGATGAGTCGGCGGGCGAGGCAACGTTCGACATCGGGAGTATGACAC
. : . : . : . : . : . :
rJMFF005M03- CGTTACCGCCAGCACCGCCGGTTGCCGTCGCGT
JMFS014F09+ CGTTACCGCCAGCACCGCCGGTTGCCGTCGCGTTCTGCGAATGATTCATCACCAACGGCG
JMFF005M03+ CGTTACCGCCAGCACCGCCGGTTGCCGTCGCGTTCTGCGAATGATTCATCACCAACGGCG
JMFF028D01+ CGTTACCGCCAGCACCGCCGGTTGCCGTCGCGTTCTGCGAATGATTCATCACCAACGGCG
____________________________________________________________
consensus CGTTACCGCCAGCACCGCCGGTTGCCGTCGCGTTCTGCGAATGATTCATCACCAACGGCG
. : . : . : . : . : . :
JMFS014F09+ GGTTTTGAGTTCTGCGATTGGAATAGCTGTGAACGCTC
JMFF005M03+ GGTTTTGAGTTCTGCGATTGGAATAGCTGTGAACGCTCTCCCTCTGTTTCCGTC
JMFF028D01+ GGTTTTGAGTTCTGCGATTGGAATAGCTGTGAACGCTCTCCCTCTGTTTCCGTCGAATCT
____________________________________________________________
consensus GGTTTTGAGTTCTGCGATTGGAATAGCTGTGAACGCTCTCCCTCTGTTTCCGTCGAATCT