Contig 000152:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004G05Sequence501000152 (15)ref|XP_003607260.1|2e-19hypothetical protein MTR_4g075160 [Medicago truncatula]510000152 (15)ref|XP_009618837.1|2e-32PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Nicotia
JMFF011G12Sequence536000152 (15)ref|XP_009618837.1|3e-32PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Nicotia513000152 (15)ref|XP_009618837.1|3e-32PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Nicotia
JMFF027K06Sequence521000152 (15)ref|XP_009618837.1|3e-32PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Nicotia524000152 (15)ref|XP_009618837.1|3e-32PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Nicotia
JMFF041K17Sequence480000152 (15)ref|XP_009618837.1|2e-32PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Nicotia472000152 (15)ref|XP_009618837.1|3e-32PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Nicotia
JMFF047B10Sequence577000152 (15)ref|XP_009618837.1|5e-32PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Nicotia575000152 (15)ref|XP_009618837.1|4e-33PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Nicotia
JMFN002G08Sequence520000152 (15)ref|XP_009618837.1|2e-32PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Nicotia
JMFN016J09Sequence506000152 (15)ref|XP_009618837.1|2e-32PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Nicotia
JMFN019K14Sequence544000152 (15)ref|XP_009618837.1|2e-32PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Nicotia
JMSF013N08Sequence470000152 (15)ref|XP_009618837.1|2e-32PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Nicotia491000152 (15)ref|XP_009618837.1|2e-32PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Nicotia

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF047B10- GCAAG
JMFN019K14- GCAAG
JMFF047B10+ GGAGGAAAAAGAATGATTCAAAAGTTCAAGTTCAGATGCAAG
                      ____________________________________________________________
consensus GGAGGAAAAAGAATGATTCAAAAGTTCAAGTTCAGATGCAAG
 
. : . : . : . : . : . :
JMFF011G12+ ACCTTTCTGTTATTCTCCAACTAGAATTAAGAAATCACAACAAAGTTGAAA
rJMFF047B10- TCATAATAAACCTTTCTGTTATTCTCCAACTAGAATTAAGAAATCACAACAAAGTTGAAA
JMFN002G08+ CATAATAAACCTTTCTGTTATTCTCCAACTAGAATTAAGAAATCACAACAAAGTTGAAA
JMFN019K14- TCATAATAAACCTTTCTGTTATTCTCCAACTAGAATTAAGAAATCACAACAAAGTTGAAA
JMFN016J09+ CTGTTATTCTCCAACTAGAATTAAGAAATCACAACAAAGTTGAAA
JMFF041K17+ TAATAAACCTTTCTGTTATTCTCCAACTAGAATTAAGAAATCACAACAAAGTTGAAA
rJMFF041K17- TAATAAACCTTTCTGTTATTCTCCAACTAGAATTAAGAAATCACAACAAAGTTGAAA
JMFF047B10+ TCATAATAAACCTTTCTGTTATTCTCCAACTAGAATTAAGAAATCACAACAAAGTTGAAA
rJMFF027K06- ACTAGAATTAAGAAATCACAACAAAGTTGAAA
rJMFF011G12- ACTAGAATTAAGAAATCACAACAAAGTTGAAA
rJMFF004G05- ACTAGAATTAAGAAATCACAACAAAGTTGAAA
rJMSF013N08- GTTGAAA
JMFF004G05+ CCAACTAGAATTAAGAAATCACAACAAAGTTGAAA
JMFF027K06+ TTATTCTCCAACTAGAATTAAGAAATCACAACAAAGTTGAAA
                      ____________________________________________________________
consensus TCATAATAAACCTTTCTGTTATTCTCCAACTAGAATTAAGAAATCACAACAAAGTTGAAA
 
. : . : . : . : . : . :
JMFF011G12+ GTTTACAGCATCAAAATAGATTCAGTAACATTAAGTGCAGAATAAGTTGATCTTTTGGAT
rJMFF047B10- GTTTACAGCATCAAAATAGATTCAGTAACATTAAGTGCAGAATAAGTTGATCTTTTGGAT
JMFN002G08+ GTTTACAGCATCAAAATAGATTCAGTAACATTAAGTGCAGAATAAGTTGATCTTTTGGAT
JMFN019K14- GTTTACAGCATCAAAATAGATTCAGTAACATTAAGTGCAGAATAAGTTGATCTTTTGGAT
JMFN016J09+ GTTTACAGCATCAAAATAGATTCAGTAACATTAAGTGCAGAATAAGTTGATCTTTTGGAT
JMFF041K17+ GTTTACAGCATCAAAATAGATTCAGTAACATTAAGTGCAGAATAAGTTGATCTTTTGGAT
rJMFF041K17- GTTTACAGCATCAAAATAGATTCAGTAACATTAAGTGCAGAATAAGTTGATCTTTTGGAT
JMFF047B10+ GTTTACAGCATCAAAATAGATTCAGTAACATTAAGTGCAGAATAAGTTGATCTTTTGGAT
rJMFF027K06- GTTTACAGCATCAAAATAGATTCAGTAACATTAAGTGCAGAATAAGTTGATCTTTTGGAT
rJMFF011G12- GTTTACAGCATCAAAATAGATTCAGTAACATTAAGTGCAGAATAAGTTGATCTTTTGGAT
rJMFF004G05- GTTTACAGCATCAAAATAGATTCAGTAACATTAAGTGCAGAATAAGTTGATCTTTTGGAT
rJMSF013N08- GTTTACAGCATCAAAATAGATTCAGTAACATTAAGTGCAGAATAAGTTGATCTTTTGGAT
JMFF004G05+ GTTTACAGCATCAAAATAGATTCAGTAACATNAAGTGCAGAATAAGTTGATCTTTTGGAT
JMSF013N08+ TTACAGCATCAAAATAGATTCAGTAACATTAAGTGCAGAATAAGTTGATCTTTTGGAT
JMFF027K06+ GTTTACAGCATCAAAATAGATTCAGTAACATTAAGTGCAGAATAAGTTGATCTTTTGGAT
                      ____________________________________________________________
consensus GTTTACAGCATCAAAATAGATTCAGTAACATTAAGTGCAGAATAAGTTGATCTTTTGGAT
 
. : . : . : . : . : . :
JMFF011G12+ CACATTCGTGACAATCCCGTTTCTAGTCAATTATTGAACAGAAATCAATAGAACTCTTAC
rJMFF047B10- CACATTCGTGACAATCCCGTTTCTAGTCAATTATTGAACAGAAATCAATAGAACTCTTAC
JMFN002G08+ CACATTCGTGACAATCCCGTTTCTAGTCAATTATTGAACAGAAATCAATAGAACTCTTAC
JMFN019K14- CACATTCGTGACAATCCCGTTTCTAGTCAATTATTGAACAGAAATCAATAGAACTCTTAC
JMFN016J09+ CACATTCGTGACAATCCCGTTTCTAGTCAATTATTGAACAGAAATCAATAGAACTCTTAC
JMFF041K17+ CACATTCGTGACAATCCCGTTTCTAGTCAATTATTGAACAGAAATCAATAGAACTCTTAC
rJMFF041K17- CACATTCGTGACAATCCCGTTTCTAGTCAATTATTGAACAGAAATCAATAGAACTCTTAC
JMFF047B10+ CACATTCGTGACAATCCCGTTTCTAGTCAATTATTGAACAGAAATCAATAGAACTCTTAC
rJMFF027K06- CACATTCGTGACAATCCCGTTTCTAGTCAATTATTGAACAGAAATCAATAGAACTCTTAC
rJMFF011G12- CACATTCGTGACAATCCCGTTTCTAGTCAATTATTGAACAGAAATCAATAGAACTCTTAC
rJMFF004G05- CACATTCGTGACAATCCCGTTTCTAGTCAATTATTGAACAGAAATCAATAGAACTCTTAC
rJMSF013N08- CACATTCGTGACAATCCCGTTTCTAGTCAATTATTGAACAGAAATCAATAGAACTCTTAC
JMFF004G05+ CACATTCGTGACAATCCCGTTTNTAGTCAATTATTGAACAGAAATCAATAGAACTCTTAC
JMSF013N08+ CACATTCGTGACAATCCCGTTTCTAGTCAATTATTGAACAGAAATCAATAGAACTCTTAC
JMFF027K06+ CACATTCGTGACAATCCCGTTTCTAGTCAATTATTGAACAGAAATCAATAGAACTCTTAC
                      ____________________________________________________________
consensus CACATTCGTGACAATCCCGTTTCTAGTCAATTATTGAACAGAAATCAATAGAACTCTTAC
 
. : . : . : . : . : . :
JMFF011G12+ AAGACACTTTCATTCCCAGAATAAGCCAAAGTTCAGTAAGGTTATTCATATTGCCTTCAT
rJMFF047B10- AAGACACTTTCATTCCCAGAATAAGCCAAAGTTCAGTAAGGTTATTCATATTGCCTTCAT
JMFN002G08+ AAGACACTTTCATTCCCAGAATAAGCCAAAGTTCAGTAAGGTTATTCATATTGCCTTCAT
JMFN019K14- AAGACACTTTCATTCCCAGAATAAGCCAAAGTTCAGTAAGGTTATTCATATTGCCTTCAT
JMFN016J09+ AAGACACTTTCATTCCCAGAATAAGCCAAAGTTCAGTAAGGTTATTCATATTGCCTTCAT
JMFF041K17+ AAGACACTTTCATTCCCAGAATAAGCCAAAGTTCAGTAAGGTTATTCATATTGCCTTCAT
rJMFF041K17- AAGACACTTTCATTCCCAGAATAAGCCAAAGTTCAGTAAGGTTATTCATATTGCCTTCAT
JMFF047B10+ AAGACACTTTCATTCCCAGAATAAGCCAAAGTTCAGTAAGGTTATTCATATTGCCTTCAT
rJMFF027K06- AAGACACTTTCATTCCCAGAATAAGCCAAAGTTCAGTAAGGTTATTCATATTGCCTTCAT
rJMFF011G12- AAGACACTTTCATTCCCAGAATAAGCCAAAGTTCAGTAAGGTTATTCATATTGCCTTCAT
rJMFF004G05- AAGACACTTTCATTCCCAGAATAAGCCAAAGTTCAGTAAGGTTATTCATATTGCCTTCAT
rJMSF013N08- AAGACACTTTCATTCCCAGAATAAGCCAAAGTTCAGTAAGGTTATTCATATTGCCTTCAT
JMFF004G05+ AAGACACTTTCATTCCCAGAATAAGCCAAAGTTCAGTAAGGTTATTCATATTGCCTTCAT
JMSF013N08+ AAGACACTTTCATTCCCAGAATAAGCCAAAGTTCAGTAAGGTTATTCATATTGCCTTCAT
JMFF027K06+ AAGACACTTTCATTCCCAGAATAAGCCAAAGTTCAGTAAGGTTATTCATATTGCCTTCAT
                      ____________________________________________________________
consensus AAGACACTTTCATTCCCAGAATAAGCCAAAGTTCAGTAAGGTTATTCATATTGCCTTCAT
 
. : . : . : . : . : . :
JMFF011G12+ GCTTTGAACCCGACATCTAATGATCATTCCCATGATCTCCATGACCTTCCCAAGGATGCC
rJMFF047B10- GCTTTGAACCCGACATCTAATGATCATTCCCATGATCTCCATGACCTTCCCAAGGATGCC
JMFN002G08+ GCTTTGAACCCGACATCTAATGATCATTCCCATGATCTCCATGACCTTCCCAAGGATGCC
JMFN019K14- GCTTTGAACCCGACATCTAATGATCATTCCCATGATCTCCATGACCTTCCCAAGGATGCC
JMFN016J09+ GCTTTGAACCCGACATCTAATGATCATTCCCATGATCTCCATGACCTTCCCAAGGATGCC
JMFF041K17+ GCTTTGAACCCGACATCTAATGATCATTCCCATGATCTCCATGACCTTCCCAAGGATGCC
rJMFF041K17- GCTTTGAACCCGACATCTAATGATCATTCCCATGATCTCCATGACCTTCCCAAGGATGCC
JMFF047B10+ GCTTTGAACCCGACATCTAATGATCATTCCCATGATCTCCATGACCTTCCCAAGGATGCC
rJMFF027K06- GCTTTGAACCCGACATCTAATGATCATTCCCATGATCTCCATGACCTTCCCAAGGATGCC
rJMFF011G12- GCTTTGAACCCGACATCTAATGATCATTCCCATGATCTCCATGACCTTCCCAAGGATGCC
rJMFF004G05- GCTTTGAACCCGACATCTAATGATCATTCCCATGATCTCCATGACCTTCCCAAGGATGCC
rJMSF013N08- GCTTTGAACCCGACATCTAATGATCATTCCCATGATCTCCATGACCTTCCCAAGGATGCC
JMFF004G05+ GCTTTGAACCCGACATCTAATGATCATTCCCATGATCTCCATGACCTTCCCAAGGATGCC
JMSF013N08+ GCTTTGAACCCGACATCTAATGATCATTCCCATGATCTCCATGACCTTCCCAAGGATGCC
JMFF027K06+ GCTTTGAACCCGACATCTAATGATCATTCCCATGATCTCCATGACCTTCCCAAGGATGCC
                      ____________________________________________________________
consensus GCTTTGAACCCGACATCTAATGATCATTCCCATGATCTCCATGACCTTCCCAAGGATGCC
 
. : . : . : . : . : . :
JMFF011G12+ TCCATCCCAATACTACAGGTCCATCCTGTTTGGCTCGGTACAGAATCCAAAACCACATGA
rJMFF047B10- TCCATCCCAATACTACAGGTCCATCCTGTTTGGCTCGGTACAGAATCCAAAACCACATGA
JMFN002G08+ TCCATCCCAATACTACAGGTCCATCCTGTTTGGCTCGGTACAGAATCCAAAACCACATGA
JMFN019K14- TCCATCCCAATACTACAGGTCCATCCTGTTTGGCTCGGTACAGAATCCAAAACCACATGA
JMFN016J09+ TCCATCCCAATACTACAGGTCCATCCTGTTTGGCTCGGTACAGAATCCAAAACCACATGA
JMFF041K17+ TCCATCCCAATACTACAGGTCCATCCTGTTTGGCTCGGTACAGAATCCAAAACCACATGA
rJMFF041K17- TCCATCCCAATACTACAGGTCCATCCTGTTTGGCTCGGTACAGAATCCAAAACCACATGA
JMFF047B10+ TCCATCCCAATACTACAGGTCCATCCTGTTTGGCTCGGTACAGAATCCAAAACCACATGA
rJMFF027K06- TCCATCCCAATACTACAGGTCCATCCTGTTTGGCTCGGTACAGAATCCAAAACCACATGA
rJMFF011G12- TCCATCCCAATACTACAGGTCCATCCTGTTTGGCTCGGTACAGAATCCAAAACCACATGA
rJMFF004G05- TCCATCCCAATACTACAGGTCCATCCTGTTTGGCTCGGTACAGAATCCAAAACCACATGA
rJMSF013N08- TCCATCCCAATACTACAGGTCCATCCTGTTTGGCTCGGTACAGAATCCAAAACCACATGA
JMFF004G05+ TCCATCCCAATACTACAGGTCCATCCTGTTTGGCTCGGTACAGAATCCAAAACCACATGA
JMSF013N08+ TCCATCCCAATACTACAGGTCCATCCTGTTTGGCTCGGTACAGAATCCAAAACCACATGA
JMFF027K06+ TCCATCCCAATACTACAGGTCCATCCTGTTTGGCTCGGTACAGAATCCAAAACCACATGA
                      ____________________________________________________________
consensus TCCATCCCAATACTACAGGTCCATCCTGTTTGGCTCGGTACAGAATCCAAAACCACATGA
 
. : . : . : . : . : . :
JMFF011G12+ CGGCACACAAGCCCTTGCCGGTGAC-GGTGTGCCAGCGCTTGGGCTGATGGATCGTAATG
rJMFF047B10- CGGCACACAAGCCCTTGCCGGTGAC-GGTGTGCCAGCGCTTGGGCTGATGGATCGTAATG
JMFN002G08+ CGGCACACAAGCCCTTGCCGGTGAC-GGTGTGCCAGCGCTTGGGCTGATGGATCGTAATG
JMFN019K14- CGGCACACAAGCCCTTGCCGGTGAC-GGTGTGCCAGCGCTTGGGCTGATGGATCGTAATG
JMFN016J09+ CGGCACACAAGCCCTTGCCGGTGAC-GGTGTGCCAGCGCTTGGGCTGATGGATCGTAATG
JMFF041K17+ CGGCACACAAGCCCTTGCCGGTGAC-GGTGTGCCAGCGCTTGGGCTGATGGATCGTAATG
rJMFF041K17- CGGCACACAAGCCCTTGCCGGTGAC-GGTGTGCCAGCGCTTGGGCTGATGGATCGTAATG
JMFF047B10+ CGGCACACAAGCCCTTGCCGGTGAC-GGTGTGCCAGCGCTTGGGCTGATGGATCGTAATG
rJMFF027K06- CGGCACACAAGCCCTTGCCGGTGAC-GGTGTGCCAGCGCTTGGGCTGATGGATCGTAATG
rJMFF011G12- CGGCACACAAGCCCTTGCCGGTGAC-GGTGTGCCAGCGCTTGGGCTGATGGATCGTAATG
rJMFF004G05- CGGCACACAAGCCCTTGCCGGTGAC-GGTGTGCCAGCGCTTGGGCTGATGGATCGTAATG
rJMSF013N08- CGGCACACAAGCCCTTGCCGGTGAC-GGTGTGCCAGCGCTTGGGCTGATGGATCGTAATG
JMFF004G05+ CGGCACACAAGCCCTTGCCGGTGACTGGTGTGCCAGCGCTTGGGCTGATGGATCGTAATG
JMSF013N08+ CGGCACACAAGCCCTTGCCGGTGAC-GGTGTGCCAGCGCTTGGGCTGATGGATCGTAATG
JMFF027K06+ CGGCACACAAGCCCTTGCCGGTGAC-GGTGTGCCAGCGCTTGGGCTGATGGATCGTAATG
                      ____________________________________________________________
consensus CGGCACACAAGCCCTTGCCGGTGAC-GGTGTGCCAGCGCTTGGGCTGATGGATCGTAATG
 
. : . : . : . : . : . :
JMFF011G12+ CCTTTGTAAGTTACGCCGTGGCCATGTCCGTCTCCCATCTCCGATCTCCGATCTCTTTCT
rJMFF047B10- CCTTTGTAAGTTACGCCGTGGCCATGTCCGTCTCCCATCTCCGATCTCCGATCTCTTTCT
JMFN002G08+ CCTTTGTAAGTTACGCCGTGGCCATGTCCGTCTCCCATCTCCGATCTCCGATCTCTTTCT
JMFN019K14- CCTTTGTAAGTTACGCCGTGGCCATGTCCGTCTCCCATCTCCGATCTCCGATCTCTTTCT
JMFN016J09+ CCTTTGTAAGTTACGCCGTGGCCATGTCCGTCTCCCATCTCCGATCTCCGATCTCTTTCT
JMFF041K17+ CCTTCGTAAGTTACGCCGTGGCCATGTCCGTCTCCCATCTCCGATCTCCGATCTCTTTCT
rJMFF041K17- CCTTCGTAAGTTACGCCGTGGCCATGTCCGTCTCCCATCTCCGATCTCCGATCT
JMFF047B10+ CCTTTGTAAGTTACGCCGTGGCCATGTCCGTCTCCCATCTCCGATCTCCGATCTCTTTCT
rJMFF027K06- CCTTTGTAAGTTACGCCGTGGCCATGTCCGTCTCCCATCTCCGATCTCCGATCTCTTTCT
rJMFF011G12- CCTTTGTAAGTTACGCCGTGGCCATGTCCGTCTCCCATCTCCGATCTCCGATCTCTTTCT
rJMFF004G05- CCTTTGTAAGTTACGCCGTGGCCATGTCCGTCTCCCATCTCCGATCTCCGATCTCTTTCT
rJMSF013N08- CCTTTGTAAGTTACGCCGTGGCCATGTCCGTCTCCCATCTCCGATCTCCGATCTCTTTCT
JMFF004G05+ CCTTTGTAAGTTACGCCGTGGCCATGTCCGTCTCCCATCTCCGATCTCCGATCTCTTTCT
JMSF013N08+ CCTTTGTAAGTTACGCCGTGGCCATGTCCGTCTCCCATCTCCGATCTCCGATCTCTTTCT
JMFF027K06+ CCTTTGTAAGTTACGCCGTGGCCATGTCCGTCTCCCATCTCCGATCTCCGATCTCTTTCT
                      ____________________________________________________________
consensus CCTTTGTAAGTTACGCCGTGGCCATGTCCGTCTCCCATCTCCGATCTCCGATCTCTTTCT
 
. : . : . : . : . : . :
JMFF011G12+ TCCCCACAACCGCAGATTACGCCGTGCTTCACTGTTATACAACCTCAGCGC
rJMFF047B10- TC-CCACAACCGCAGATTACGCCGTGCTTCACTGTTATACAACCTCAGCGCTACC
JMFN002G08+ TCCCCACAACCGCAGATTACGCCGTGCTTCAC
JMFN019K14- TCCCCACAACCGCAGATTACGCCG
JMFN016J09+ TCCCCACAACCGCAGATTACGCCGTGCTTCAC
JMFF041K17+ TC
JMFF047B10+ TCCCCACAACCGCAGATTACGCCGTGCTTCACTGTTATACAACCTCAGCGCTACC
rJMFF027K06- TCCCCACAACCGCAGATTACGCCGTGCTTCACTGTTATACAACCTCAGCGCTACC
rJMFF011G12- TCCCCACAACCGCAGATTACGCCGTGCTTCACTGTTATACAACCTCAGCGC
rJMFF004G05- TCACCACAACCGCAGATTACGCCGTGCTTCACTGTTATACAACC
rJMSF013N08- TCCCCACAACCGCAGATTACGCCGTGCTTCACTGTTATACAACCTCAGCGC
JMFF004G05+ TCACCACAACCGCAGATTACGCCGTGCTTCACTGTTATACAACC
JMSF013N08+ TCCCCACAACCGCAGATTACGCCGTGCTTCACTGTTATACAACCTCAGCGC
JMFF027K06+ TCCCCACAACCGCAGATTACGCCGTGCTTCACTGTTATACAACCTCAGCGCTACCAGAAG
                      ____________________________________________________________
consensus TCCCCACAACCGCAGATTACGCCGTGCTTCACTGTTATACAACCTCAGCGCTACCAGAAG