Contig 000136:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006I02Sequence412000136 (3)ref|XP_009786475.1|2e-13PREDICTED: uncharacterized protein LOC104234578 isoform X3 [Nicotiana sylvestri683004030 (4)ref|XP_009596796.1|2e-109PREDICTED: uncharacterized protein LOC104092828 isoform X1 [Nicotiana tomentosi
JMFF025L12Sequence618000136 (3)ref|XP_009786475.1|2e-57PREDICTED: uncharacterized protein LOC104234578 isoform X3 [Nicotiana sylvestri753004030 (4)ref|XP_009786472.1|4e-122PREDICTED: uncharacterized protein LOC104234578 isoform X1 [Nicotiana sylvestri
JMSF001H07Sequence366000136 (3)ref|XP_009596796.1|1e-06PREDICTED: uncharacterized protein LOC104092828 isoform X1 [Nicotiana tomentosi764004030 (4)ref|XP_009786472.1|2e-135PREDICTED: uncharacterized protein LOC104234578 isoform X1 [Nicotiana sylvestri

Alignment

This contig is upended


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JMFF025L12+                                                     CTTCAGACTTTCTTGAAA
                      ____________________________________________________________
consensus                                                       CTTCAGACTTTCTTGAAA
 
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JMFF025L12+           AGTAAAGGCTTTGAAGTGCGTGAATATCACAATTAGGATGAAGTCCAACAACTACCATGC
                      ____________________________________________________________
consensus             AGTAAAGGCTTTGAAGTGCGTGAATATCACAATTAGGATGAAGTCCAACAACTACCATGC
 
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JMFF025L12+           TTTCAAAAAGCCTTGATGGTTCTTTCCAAACTCTGTGATCCAGAGATTGCAACTGAAAGT
                      ____________________________________________________________
consensus             TTTCAAAAAGCCTTGATGGTTCTTTCCAAACTCTGTGATCCAGAGATTGCAACTGAAAGT
 
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JMFF025L12+           TGGCCCATTGGCGTTTTTGGCTAGTTAATATTTCTGGGTTGTAAAGTCTACTTTTTGCTT
                      ____________________________________________________________
consensus             TGGCCCATTGGCGTTTTTGGCTAGTTAATATTTCTGGGTTGTAAAGTCTACTTTTTGCTT
 
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JMSF001H07+                                                                TTCATTG
JMFF006I02+                   CTTGATAAACCTTTAATCAATTTAGAAACTTGATTTTGAAGTTTNTTCATTG
JMFF025L12+           CAGGAGGACTTGATAAACCTTTAATCAATTTAGAAACTTGATTCTGAAGTTTCTTCATTG
                      ____________________________________________________________
consensus             CAGGAGGACTTGATAAACCTTTAATCAATTTAGAAACTTGATTTTGAAGTTTCTTCATTG
 
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JMSF001H07+           GGCTACCAGTGTCATCTTTGGCTGAATATACCACAGAAGGCCTGGGGGCCCGAACAGCAG
JMFF006I02+           GGNTACCAGTGTCATCTTTGGNTGAATATACCNCAGAAGGCCTGGGGGCCCGAACAGCAG
JMFF025L12+           GGCTACCAGTGTCATCTTTGGCTGAATATACCACAGAAGGCCTGGGGGCCCGAACAGCAG
                      ____________________________________________________________
consensus             GGCTACCAGTGTCATCTTTGGCTGAATATACCACAGAAGGCCTGGGGGCCCGAACAGCAG
 
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JMSF001H07+           CTGCAGCAGCAGCAACAGCTTTTGCAACATCTTCAGTGGTCTGGTATAATGATGCACCCC
JMFF006I02+           CTGCAGCAGCAGCAACAGCTTTTGCAACATNTTCAGTGGTNTGGTATAATGATGCACCCC
JMFF025L12+           CTGCAGCAGCAGCAACAGCTTTTGCAACATCTTCAGTGGTCTGGTATAATGATGCACCCC
                      ____________________________________________________________
consensus             CTGCAGCAGCAGCAACAGCTTTTGCAACATCTTCAGTGGTCTGGTATAATGATGCACCCC
 
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JMSF001H07+           AACCAGGGCTACCTGACTCTTCAATTTTCTCCATTCGAAAAGCTTCCCTTCTCTCTTAAA
JMFF006I02+           AACCAGGGNTACCTGACTNTTCAATTTTNTCCATTNGAAAAGCTTCCCTTNTNTNTTAAA
JMFF025L12+           AACCAGGGCTACCTGACTCTTCAATTTTCTCCATTCGAAAAGCTTCCCTTCTCTCTTAAA
                      ____________________________________________________________
consensus             AACCAGGGCTACCTGACTCTTCAATTTTCTCCATTCGAAAAGCTTCCCTTCTCTCTTAAA
 
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JMSF001H07+           AACCCCGGATTTTGATAGAGATATGTTTAAGCACAAGAATTCCCTGTGTCTAAATATGAG
JMFF006I02+           AACCCCGGATTTTGATAGAGATATGTTTAAGCACAAGAATTCCCTGTGTNTAAATATGAG
JMFF025L12+           AACCCCGGATTTTGATAGAGATATGTTTAAGCACAAGAATTCCCTGTGTCTAAATATGAG
                      ____________________________________________________________
consensus             AACCCCGGATTTTGATAGAGATATGTTTAAGCACAAGAATTCCCTGTGTCTAAATATGAG
 
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JMSF001H07+           AAAATTACTCTCTGCTGTAGAAAAGAAGTTTTAGAAGGAGAGAGAGAGTAAAGATGTAGA
JMFF006I02+           AAAATTACTCTNTGCTGTAGAAAAGAAGTTTTAGAAGGAGAGAGAGAGTAAAGATGTAGA
JMFF025L12+           AAAATTACTCTCTGCTGTAGAAAAGAAGTTTTAGAAGGAGAGAGAGAGTAAAGATGTAGA
                      ____________________________________________________________
consensus             AAAATTACTCTCTGCTGTAGAAAAGAAGTTTTAGAAGGAGAGAGAGAGTAAAGATGTAGA
 
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JMSF001H07+           GTCAGGCGGCCATGAGAGAGAAGCAGCTCTTGAAATTCTGGGAAAACCAGGAAA      
JMFF006I02+           GTCAGGCGGCCATGAGAGAGAAGCAGCTCTTGAAATTNTGGGAAAACCAGGAAA      
JMFF025L12+           GTCAGGCGGCCATGAGAGAGAAGCAGCTCTTGAAATTCTGGGAAAACCAGGAAACTCCCC
                      ____________________________________________________________
consensus             GTCAGGCGGCCATGAGAGAGAAGCAGCTCTTGAAATTCTGGGAAAACCAGGAAACTCCCC