Contig 000119:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021P05Sequence487000119 (3)dbj|BAC97837.1|2e-80duplicated [Ipomoea nil] dbj|BAF36711.1| DUPLICATED protein [Ipomoea nil]674000119 (3)ref|XP_009802761.1|7e-43PREDICTED: floral homeotic protein AGAMOUS isoform X2 [Nicotiana sylvestris] re
JMFN003M15Sequence615000119 (3)dbj|BAC97837.1|8e-126duplicated [Ipomoea nil] dbj|BAF36711.1| DUPLICATED protein [Ipomoea nil]

Alignment

This contig is upended


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rJMFF021P05-             TATATAACTCCACAAACATTTGAATATGATATCTCAATTCAGTTCAAACAGCATCAA
                      ____________________________________________________________
consensus                TATATAACTCCACAAACATTTGAATATGATATCTCAATTCAGTTCAAACAGCATCAA
 
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rJMFF021P05-          CATAAAACAGTAGAAAACATATGTCTCCAGTTAATACATAACAAGTCTGAGGTAACGTTT
                      ____________________________________________________________
consensus             CATAAAACAGTAGAAAACATATGTCTCCAGTTAATACATAACAAGTCTGAGGTAACGTTT
 
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rJMFF021P05-          ATCATCATCATATCCATAAAACCATCAGCTTCCATCTTCACTCCTTACATTTCTTGAAGA
                      ____________________________________________________________
consensus             ATCATCATCATATCCATAAAACCATCAGCTTCCATCTTCACTCCTTACATTTCTTGAAGA
 
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rJMFF021P05-          CGCCATAAGTACCAGGTTGTCGTCACACTTCATATTATCCATATATATTTATATATATAG
                      ____________________________________________________________
consensus             CGCCATAAGTACCAGGTTGTCGTCACACTTCATATTATCCATATATATTTATATATATAG
 
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rJMFF021P05-          TTTTGCGACAAACAGCACCATGGATCCCTCCCAGATTATTACACTAACTGAAGGGGGAGA
                      ____________________________________________________________
consensus             TTTTGCGACAAACAGCACCATGGATCCCTCCCAGATTATTACACTAACTGAAGGGGGAGA
 
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rJMFF021P05-          TGATCTTGCTTGGAGTAACTAGAGGTGGATTGAAATCCATCGAGTTGGAGGTAGTTTCTT
                      ____________________________________________________________
consensus             TGATCTTGCTTGGAGTAACTAGAGGTGGATTGAAATCCATCGAGTTGGAGGTAGTTTCTT
 
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rJMFF021P05-          GCATCAAATTGCTGGGGCGGCGCCAGCTCATGATAGCTAGAACTCCCAGGCATCAAGTTC
                      ____________________________________________________________
consensus             GCATCAAATTGCTGGGGCGGCGCCAGCTCATGATAGCTAGAACTCCCAGGCATCAAGTTC
 
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rJMFF021P05-          ATCTGCTGCTGCTGCTGCTGAGCTCTCTCCGTCTCAATTATCTTTGCCCGAAGGTATTGG
                      ____________________________________________________________
consensus             ATCTGCTGCTGCTGCTGCTGAGCTCTCTCCGTCTCAATTATCTTTGCCCGAAGGTATTGG
 
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rJMFF021P05-          TTGTTATTATGTAAATCGATTTCCCTCTTTGCATGTAGTCGATTTCTGCAAACAGGAGCT
JMFN003M15+                                      TTTGCATGTAGTCGATTTCTGCAAACAGGAGCT
                      ____________________________________________________________
consensus             TTGTTATTATGTAAATCGATTTCCCTCTTTGCATGTAGTCGATTTCTGCAAACAGGAGCT
 
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rJMFF021P05-          CGTTCTTCTTGGCACGGATTTTGCTGATTCCTTTCTCTATTTTGGATTCCAGGTTCTTGA
JMFN003M15+           CGTTCTTCTTGGCACGGATTTTGCTGATTCCTTTCTCTATTTTGGATTCCAGGTTCTTGA
                      ____________________________________________________________
consensus             CGTTCTTCTTGGCACGGATTTTGCTGATTCCTTTCTCTATTTTGGATTCCAGGTTCTTGA
 
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rJMFF021P05-          GATCCCTAAGGTTAAAACCACCTAAACCTTCACCCATGTAGTTCCTATTCTGGTTCTGCA
JMFN003M15+           GATCCCTAAGGTTAAAACCACCTAAACCTTCACCCATGTAGTTCCTATTCTGGTTCTGCA
JMFF021P05+                                                                TTCTGCA
                      ____________________________________________________________
consensus             GATCCCTAAGGTTAAAACCACCTAAACCTTCACCCATGTAGTTCCTATTCTGGTTCTGCA
 
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rJMFF021P05-          GATTACTAATTTGTTGA                                           
JMFN003M15+           GATTACTAATTTGTTGACGCAATTTGTTCGCTTCCTGCTGATAAAACTGAGTATTGGCTT
JMFF021P05+           GATTACTAATTTGTTGACGCAATTTGTTCGCTTCCTGCTGATAAAACTGAGTATTGGCTT
                      ____________________________________________________________
consensus             GATTACTAATTTGTTGACGCAATTTGTTCGCTTCCTGCTGATAAAACTGAGTATTGGCTT
 
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JMFN003M15+           CAGAAATGGATCCAGTATTAGTGGAATCTGAGCATGCCTTCTTGTACCTATCAATTGTTG
JMFF021P05+           CAGAAATGGATCCAGTATTAGTGGAATCTGAGCATGCCTTCTTGTACCTATCAATTGTTG
                      ____________________________________________________________
consensus             CAGAAATGGATCCAGTATTAGTGGAATCTGAGCATGCCTTCTTGTACCTATCAATTGTTG
 
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JMFN003M15+           CCTTCACACTGTTGTTAGCATACTCGTAGAGGCGGCCGCGGCTGGAGAAGACGATGAGAG
JMFF021P05+           CCTTCACACTGTTGTTAGCATACTCGTAGAGGCGGCCGCGGCTGGAGAAGACGATGAGAG
                      ____________________________________________________________
consensus             CCTTCACACTGTTGTTAGCATACTCGTAGAGGCGGCCGCGGCTGGAGAAGACGATGAGAG
 
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JMFN003M15+           CCACCTCAGCGTCACACAGAACAGACAACTCGTAGGCCTTCTTCAGCAACCCATTTCTGC
JMFF021P05+           CCACCTCAGCGTCACACAGAACAGACAACTCGTAGGCCTTCTTCAGCAACCCATTTCTGC
                      ____________________________________________________________
consensus             CCACCTCAGCGTCACACAGAACAGACAACTCGTAGGCCTTCTTCAGCAACCCATTTCTGC
 
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JMFN003M15+           GCTTGCAGAAGGTCACCTGCCGGTTCGTGGTGTTCTCGATCCGCTTGATTTCGATCTTGC
JMFF021P05+           GCTTGCAGAAGGTCACCTGCCGGTTCGTGGTGTTCTCGATCCGCTTGATTTCGATCTTGC
                      ____________________________________________________________
consensus             GCTTGCAGAAGGTCACCTGCCGGTTCGTGGTGTTCTCGATCCGCTTGATTTCGATCTTGC
 
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JMFN003M15+           CCCGACCCATTTTCCGCTGAGGGGACATCTCTCTGGATTGATCACTTTGGAATTCCATTC
JMFF021P05+           CCCGACCCATTTTCCGCTGAGGGGACATCTCTCTGGATTGATCACTTTGGAATTCCATTC
                      ____________________________________________________________
consensus             CCCGACCCATTTTCCGCTGAGGGGACATCTCTCTGGATTGATCACTTTGGAATTCCATTC
 
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JMFN003M15+           TTAACTTGCTTCACCACCTGATTATGGAATATAGGGATAGAAGGTAATGGAGGGAAGAAA
JMFF021P05+           TTAACTTGCTTCACCACCTGATTATGGAATATAGGGATAGAAGGTAATGGAGGGAAGAAA
                      ____________________________________________________________
consensus             TTAACTTGCTTCACCACCTGATTATGGAATATAGGGATAGAAGGTAATGGAGGGAAGAAA
 
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JMFN003M15+           CTAAAGTTTCTGGCTT                                            
JMFF021P05+           CTAAAGTTTCTGGCTTTTGCTAATGCTCTCAACTTTCCTGCAAATCTGAACAGGAGAGAT
                      ____________________________________________________________
consensus             CTAAAGTTTCTGGCTTTTGCTAATGCTCTCAACTTTCCTGCAAATCTGAACAGGAGAGAT