Contig 000114:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021C07Sequence562000114 (2)ref|XP_009787297.1|50.4PREDICTED: uncharacterized protein LOC104235275 [Nicotiana sylvestris]526000114 (2)ref|XP_009787297.1|50.4PREDICTED: uncharacterized protein LOC104235275 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF021C07+ GCAAGCATATCGCCAAGTCCAC
JMFF021C07- GCAAGCATATCGCCAAGTCCAC
                      ____________________________________________________________
consensus GCAAGCATATCGCCAAGTCCAC
 
. : . : . : . : . : . :
rJMFF021C07+ CAGCGTGCTCCATCGCAGCCGGTTGCTATCTCCGAACCCGTGGCTGCTCCTCGGCTTCGC
JMFF021C07- CAGCGTGCTCCATCGCAGCCGGTTGCTATCTCCGAACCCGTGGCTGCTCCTCGGCTTCGC
                      ____________________________________________________________
consensus CAGCGTGCTCCATCGCAGCCGGTTGCTATCTCCGAACCCGTGGCTGCTCCTCGGCTTCGC
 
. : . : . : . : . : . :
rJMFF021C07+ TGTTTCTTCGACGCGGGGTACCGGCCACGCACGGGAGAAGCATCGTTTGGGGCAGTTTTG
JMFF021C07- TGTTTCTTCGACGCGGGGTACCGGCCACGCACGGGAGAAGCATCGTTTGGGGCAGTTTTG
                      ____________________________________________________________
consensus TGTTTCTTCGACGCGGGGTACCGGCCACGCACGGGAGAAGCATCGTTTGGGGCAGTTTTG
 
. : . : . : . : . : . :
rJMFF021C07+ GTAACACACAGCGGCTCGTTCGTAGCGGCATGCAGCGACAAGCTCGCAAGTTGCTTCTCA
JMFF021C07- GTAACACACAGCGGCTCGTTCGTAGCGGCATGCAGCGACAAGCTCGCAAGTTGCTTCTCA
                      ____________________________________________________________
consensus GTAACACACAGCGGCTCGTTCGTAGCGGCATGCAGCGACAAGCTCGCAAGTTGCTTCTCA
 
. : . : . : . : . : . :
rJMFF021C07+ CCACTCATGGCGGAACCATTGGCTTGTAATGAGGTTCTTTCGTGGCTCAAGGAGTCGAGG
JMFF021C07- CCACTCATGGCGGAACCATTGGCTTGTAATGAGGTTCTTTCGTGGCTCAAGGAGTCGAGG
                      ____________________________________________________________
consensus CCACTCATGGCGGAACCATTGGCTTGTAATGAGGTTCTTTCGTGGCTCAAGGAGTCGAGG
 
. : . : . : . : . : . :
rJMFF021C07+ ATTGCAATGTGTTGGCTGTGGATCTATTCACCGATTGTTCGGAACTGCATAACTGCGTTC
JMFF021C07- ATTGCAATGTGTTGGCTGTGGATCTATTCACCGATTGTTCGGAACTGCATAACTGCGTTC
                      ____________________________________________________________
consensus ATTGCAATGTGTTGGCTGTGGATCTATTCACCGATTGTTCGGAACTGCATAACTGCGTTC
 
. : . : . : . : . : . :
rJMFF021C07+ TCTCCAGGAGTTCTACTGTTTTGTCCTATGTTGGGTTGATAGTTGATCAATGTAGGGCAT
JMFF021C07- TCTCCAGGAGTTCTACTGTTTTGTCCTATGTTGGGTTGATAGTTGATCAATGTAGGGCAT
                      ____________________________________________________________
consensus TCTCCAGGAGTTCTACTGTTTTGTCCTATGTTGGGTTGATAGTTGATCAATGTAGGGCAT
 
. : . : . : . : . : . :
rJMFF021C07+ ATCTTTGTTTTCGTATTGATTCTTAAATTTCCACTCTAGAGTTTTAAATTCTCATGCTCA
JMFF021C07- ATCTTTGTTTTCGTATTGATTCTTAAATTTCCACTCTAGAGTTTTAAATTCTCATGCTCA
                      ____________________________________________________________
consensus ATCTTTGTTTTCGTATTGATTCTTAAATTTCCACTCTAGAGTTTTAAATTCTCATGCTCA
 
. : . : . : . : . : . :
rJMFF021C07+ TATTTTAGCATATGAAGCTTTTGCTCAAATTAACTCTATGTACTAAGATTCTGTTCCTCC
JMFF021C07- TATTTTAGCATATGAAGCTTTTGCTCAAATTAACTCTATGTACTAAGATTCTGTTCCTCC
                      ____________________________________________________________
consensus TATTTTAGCATATGAAGCTTTTGCTCAAATTAACTCTATGTACTAAGATTCTGTTCCTCC
 
. : . : . : . : . : . :
rJMFF021C07+ TGACTTTATCTCTTTGCTCATTCA
JMFF021C07- TGACTTTATCTCTTTGCTCATTCATTAATATACTCCTGCAGTTTGCTTTCAAAAAAAAAA
                      ____________________________________________________________
consensus TGACTTTATCTCTTTGCTCATTCATTAATATACTCCTGCAGTTTGCTTTCAAAAAAAAAA