Contig 000113:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021A15Sequence182000113 (3)448001120 (14)ref|XP_010091118.1|2e-05hypothetical protein L484_011324 [Morus notabilis] gb|EXB42553.1| hypothetical p
JMSF018K03Sequence554010766 (12)778000113 (3)ref|XP_006362208.1|6e-101PREDICTED: carbon catabolite repressor protein 4 homolog 1-like [Solanum tubero
JMSF037O11Sequence692010766 (12)gb|KDO70851.1|5e-08hypothetical protein CISIN_1g0074091mg, partial [Citrus sinensis] gb|KDO70852.1|691000113 (3)ref|XP_010312071.1|3e-79PREDICTED: carbon catabolite repressor protein 4 homolog 1-like [Solanum lycope

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF018K03+ CAGCTTGTTTGTGTGGCCAATACTCATGTGAATGTTCAACAT
                      ____________________________________________________________
consensus CAGCTTGTTTGTGTGGCCAATACTCATGTGAATGTTCAACAT
 
. : . : . : . : . : . :
rJMSF037O11+ GGGCTGGAAAAGATT
rJMSF018K03+ GAATTGAAGGATGTCAAGCTTTGGCAGGTTCATACACTCTTGAAAGGGCTGGAAAAGATT
                      ____________________________________________________________
consensus GAATTGAAGGATGTCAAGCTTTGGCAGGTTCATACACTCTTGAAAGGGCTGGAAAAGATT
 
. : . : . : . : . : . :
rJMSF037O11+ GCTGCTAGTGCTGATATTCCAATGTTGGTGTGTGGTGATTTTAATTCGATGCCTGGAAGT
rJMSF018K03+ GCTGCTAGTGCTGATATTCCAATGTTGGTGTGTGGTGATTTTAATTCGATGCCTGGAAGT
                      ____________________________________________________________
consensus GCTGCTAGTGCTGATATTCCAATGTTGGTGTGTGGTGATTTTAATTCGATGCCTGGAAGT
 
. : . : . : . : . : . :
rJMSF037O11+ GCTCCTCATGCACTCCTCGCAATGGGCAAAGTTGATCCAATGCATCCAGATTTAGTAGTT
rJMSF018K03+ GCTCCTCATGCACTCCTCGCAATGGGCAAAGTTGATCCAATGCATCCAGATTTAGTAGTT
                      ____________________________________________________________
consensus GCTCCTCATGCACTCCTCGCAATGGGCAAAGTTGATCCAATGCATCCAGATTTAGTAGTT
 
. : . : . : . : . : . :
rJMSF037O11+ GACCCTCTTGGTATTCTGCGTCCAACAACCAAGTTAACACATCAACTGCCGCTGGTAAGT
rJMSF018K03+ GACCCTCTTGGTATTCTGCGTCCAACAACCAAGTTAACACATCAACTGCCGCTGGTAAGT
                      ____________________________________________________________
consensus GACCCTCTTGGTATTCTGCGTCCAACAACCAAGTTAACACATCAACTGCCGCTGGTAAGT
 
. : . : . : . : . : . :
rJMSF037O11+ GCTTACACTTCCTTTGCTAGAATGGAGACTGGTCTTGGGAGTGAGCGCCACAAGAGGAGG
rJMSF018K03+ GCTTACACTTCCTTTGCTAGAATGGAGACTGGTCTTGGGAGTGAGCGCCACAAGAGGAGG
                      ____________________________________________________________
consensus GCTTACACTTCCTTTGCTAGAATGGAGACTGGTCTTGGGAGTGAGCGCCACAAGAGGAGG
 
. : . : . : . : . : . :
rJMSF037O11+ ATGGATCCTATTACCGAGGAGCCCCTATTTACAAATTGTACTAGGGACTTCATTGGTACT
rJMSF018K03+ ATGGATCCTATTACCGAGGAGCCCCTATTTACAAATTGTACTAGGGACTTCATTGGTACT
                      ____________________________________________________________
consensus ATGGATCCTATTACCGAGGAGCCCCTATTTACAAATTGTACTAGGGACTTCATTGGTACT
 
. : . : . : . : . : . :
rJMSF037O11+ CATGATTATATATTCTACTCAGCGGACTCGTTAACCGTTGTATCATTGTTGGAGCTCCTA
rJMSF018K03+ CATGATTATATATTCTACTCAGCGGACTCGTTAACCGTTGTATCATTGTTGGAGCTCCTA
                      ____________________________________________________________
consensus CATGATTATATATTCTACTCAGCGGACTCGTTAACCGTTGTATCATTGTTGGAGCTCCTA
 
. : . : . : . : . : . :
rJMSF037O11+ GACGAGGATAGCTTGAGAAAGGACACAGCACTTCCTTCTCCAGAGTGGTCTTCTGATCAT
rJMSF018K03+ GACGAGGATAGCTTGAGAAAGGACACAGCACTTCCTTCTCCAGAGTGGTCTTCTGATCAT
                      ____________________________________________________________
consensus GACGAGGATAGCTTGAGAAAGGACACAGCACTTCCTTCTCCAGAGTGGTCTTCTGATCAT
 
. : . : . : . : . : . :
rJMSF037O11+ ATAGCCATGTTAGCTGAGTTTCGCTGCAAATCAAAAACTAAACATTGACACGACGCCGGG
rJMSF018K03+ ATAGCCATGTTAGCTGAGTTTCGCTGCAAATCAAAAACTAAACATTGACACGACGCCGGG
                      ____________________________________________________________
consensus ATAGCCATGTTAGCTGAGTTTCGCTGCAAATCAAAAACTAAACATTGACACGACGCCGGG
 
. : . : . : . : . : . :
rJMSF037O11+ TGACAGGTGTTTGGTAGAAGATGAATGATTTTGGAAATAGAGGCAGAAAGAGTGATGAGG
rJMSF018K03+ TGACAGGTGTTTGGTAGAAGATGAATGATTTTGGAAATAGAGGCAGAAAGAGTGATGAGG
JMFF021A15- GG
                      ____________________________________________________________
consensus TGACAGGTGTTTGGTAGAAGATGAATGATTTTGGAAATAGAGGCAGAAAGAGTGATGAGG
 
. : . : . : . : . : . :
rJMSF037O11+ GTTAAAATGATAAAAGCCATTGTAACAATAGTAGATGATGATGGTGTGTTCTTGGTATCC
rJMSF018K03+ GTTAAAATGATAAAAGCCATTGTAACAATAGTAGATGATGATGGTGTGTTCTTGGTATCC
JMFF021A15- GTTAAAATGATAAAAGCCATTGTAACAATAGTAGATGATGATGGTGTGTTCTTGGTATCC
                      ____________________________________________________________
consensus GTTAAAATGATAAAAGCCATTGTAACAATAGTAGATGATGATGGTGTGTTCTTGGTATCC
 
. : . : . : . : . : . :
rJMSF037O11+ ATCCCCACGAGGGTTTCTTTGTATTATGCTGCTGCCTTTGTCTCATAGGAAAAGAATGAT
rJMSF018K03+ ATCCCCACGAGGGTTTCTTTGTATTATGCTGCTGCCTTTGTCTCATAGGAAAAGAATGAT
JMFF021A15- ATCCCCACGAGGGTTTCTTTGTATTATGCTGCTGCCTTTGTCTCATAGGAAAAGAATGAT
                      ____________________________________________________________
consensus ATCCCCACGAGGGTTTCTTTGTATTATGCTGCTGCCTTTGTCTCATAGGAAAAGAATGAT
 
. : . : . : . : . : . :
rJMSF037O11+ ATTATAATGTTCACAC
rJMSF018K03+ ATTATAATGTTCACAC
JMFF021A15- ATTATAATGTTCACACTTCCCTTCTTCTTTCAATTGAAATAGAAATATCATCTTTGCTCT
                      ____________________________________________________________
consensus ATTATAATGTTCACACTTCCCTTCTTCTTTCAATTGAAATAGAAATATCATCTTTGCTCT