clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF019J01 | Sequence | 545 | 000100 (4) | ref|XP_004243544.1| | 3e-34 | PREDICTED: SEC12-like protein 2 [Solanum lycopersicum] | 736 | 013692 (4) | ref|XP_009784441.1| | 7e-42 | PREDICTED: SEC12-like protein 2 [Nicotiana sylvestris] |
JMSF006E06 | Sequence | 397 | 000100 (4) | ref|XP_004243544.1| | 5e-22 | PREDICTED: SEC12-like protein 2 [Solanum lycopersicum] | |||||
JMSF010B18 | Sequence | 230 | 000100 (4) | 774 | 013692 (4) | ref|XP_009784441.1| | 1e-67 | PREDICTED: SEC12-like protein 2 [Nicotiana sylvestris] | |||
JMSF029H10 | Sequence | 654 | 000100 (4) | ref|XP_004243544.1| | 5e-51 | PREDICTED: SEC12-like protein 2 [Solanum lycopersicum] | 728 | 013692 (4) | gb|EYU30065.1| | 4e-52 | hypothetical protein MIMGU_mgv1a008031mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
JMSF029H10+ ACACAAGAATGGGCATTGGCCTCATCAAT
____________________________________________________________
consensus ACACAAGAATGGGCATTGGCCTCATCAAT
. : . : . : . : . : . :
JMSF029H10+ AATAATTTCCATGCTAGGCCATTTGAAAACTCTCAGCTTGCCATCCTCACCACCAACAGC
____________________________________________________________
consensus AATAATTTCCATGCTAGGCCATTTGAAAACTCTCAGCTTGCCATCCTCACCACCAACAGC
. : . : . : . : . : . :
JMSF029H10+ AAGTAGAGAACCCTCATTGTTAAATGTTAGTGCTAATTGCTGTCCAACGTCTTCCAATTG
JMFF019J01+ AATTG
____________________________________________________________
consensus AAGTAGAGAACCCTCATTGTTAAATGTTAGTGCTAATTGCTGTCCAACGTCTTCCAATTG
. : . : . : . : . : . :
JMSF029H10+ CTTAAGTAATCTCTCAGATAACTTCACACTTAAAGCACCATCATCTGTGTCACTGCCTGC
JMFF019J01+ CTTAAGTAATCTCTCAGATAACTTCACACTTAAAGCACCATCATCTGTGTCACTGCCTGC
____________________________________________________________
consensus CTTAAGTAATCTCTCAGATAACTTCACACTTAAAGCACCATCATCTGTGTCACTGCCTGC
. : . : . : . : . : . :
JMSF029H10+ AT-GCACTCAAACCAACTGCAACTCTTTGGTAAGGAACAAACAAGACCTTCTCCCCCAGG
JMSF006E06+ CCCAGG
JMFF019J01+ ATCCCACTCAAACCAACTGCAACTCTTTGGTAAGGAAAAAATAAGACCTTCTCCCCCAGG
____________________________________________________________
consensus ATCGCACTCAAACCAACTGCAACTCTTTGGTAAGGAACAAATAAGACCTTCTCCCCCAGG
. : . : . : . : . : . :
JMSF029H10+ GTGGACAGTCATCCTGTAAGGCAGATCACTGCCAGTTCCAAGCCTTGCCACAGGCAGATC
JMSF006E06+ GTGGACAGTCATCCTGTAAGGCAGATCACTGCCAGTTCCAAGCCTTGCCACAGGCAGATC
JMFF019J01+ GTGGACAGTCATCCTGTAAGGCAGATCACTGCCAGTTCCAAGCCTTGCCACAGGCAGATC
____________________________________________________________
consensus GTGGACAGTCATCCTGTAAGGCAGATCACTGCCAGTTCCAAGCCTTGCCACAGGCAGATC
. : . : . : . : . : . :
JMSF029H10+ GGAGAGAAAGCTGGAATCGAAATCGAATCGAGCTAGAAGGATAGCATTGGGGATACCACT
JMSF006E06+ GGAGAGAAAGCTGGAATCGAAATCGAATCGAGCTAGAAGGATAGCATTGGGGATACCACT
JMFF019J01+ GGAGAGAAAGCTGGAATCGAAATCGAATCGAGCTAGAAGGATAGCATTGGGGATACCACT
____________________________________________________________
consensus GGAGAGAAAGCTGGAATCGAAATCGAATCGAGCTAGAAGGATAGCATTGGGGATACCACT
. : . : . : . : . : . :
JMSF029H10+ ATTCCCTTCGCCGCCCCCTCCAGCCATGACGACGTAGTTGTGGGTGGCGATCAGAGGCGA
JMSF006E06+ ATTCCCTTCGCCGCCCCCTCCAGCCATGACGACGTAGTTGTGGGTGGCGATCAGAGGCGA
JMSF010B18+ CGATCAGAGGCGA
JMFF019J01+ ATTCCCTTCGCCGCCCCCTCCAGCCATGACGACGTAGTTGTGGGTGGCGATCAGAGGCGA
____________________________________________________________
consensus ATTCCCTTCGCCGCCCCCTCCAGCCATGACGACGTAGTTGTGGGTGGCGATCAGAGGCGA
. : . : . : . : . : . :
JMSF029H10+ CTTGTCGGCGGCGTCCTTATCGTCACCATCTCCCTCTGGCGGCGGTTTGGGAGCAGATCT
JMSF006E06+ CTTGTCGGCGGCGTCCTTATCGTCACCATCTCCCTCTGGCGGCGGTTTGGGAGCAGATCT
JMSF010B18+ CTTGTCGGCGGCGTCCTTATCGTCACCATCTCCCTCTGGCGGCGGTTTGGGAGCAGATCT
JMFF019J01+ CTTGTCGGCGGCGTCCTTATCGTCACCATCTCCCTCTGGCGGCGGTTTGGGAGCAGATCT
____________________________________________________________
consensus CTTGTCGGCGGCGTCCTTATCGTCACCATCTCCCTCTGGCGGCGGTTTGGGAGCAGATCT
. : . : . : . : . : . :
JMSF029H10+ GATGGCGCCAGGTGGAACCCAGGCAGCTCCGTAGACTGGGACCCCATACTTCTTGCAGCT
JMSF006E06+ GATGGCGCCAGGTGGAACCCAGGCAGCTCCGTAGACTGGGACCCCATACTTCTTGCAGCT
JMSF010B18+ GATGGCGCCAGGTGGAACCCAGGCAGCTCCGTAGACTGGGACCCCATACTTCTTGCAGCT
JMFF019J01+ GATGGCGCCAGGTGGAACCCTGGCAGCTCCGTAGACTGGGACCCCATACTTCTTGCAGCT
____________________________________________________________
consensus GATGGCGCCAGGTGGAACCCAGGCAGCTCCGTAGACTGGGACCCCATACTTCTTGCAGCT
. : . : . : . : . : . :
JMSF029H10+ TTCATCGTTGGCCATAATCAAGTCTGCGGGTGATCTTAGAGTGTGAAACTACTGAAGATC
JMSF006E06+ TTCATCGTTGGCCATAATCAAGTCTGCGGGTGATCTTAGAGTGTGAAACTACTGAAGATC
JMSF010B18+ TTCATCGTTGGCCATAATCAAGTCTGCGGGTGATCTTAGAGTGTGAAACTACTGAAGATC
JMFF019J01+ TTCATCGTTGGCCATAATCAAGTCTGCGGGTGATCTTAGAGTGTGAAACTACTGAAGATC
____________________________________________________________
consensus TTCATCGTTGGCCATAATCAAGTCTGCGGGTGATCTTAGAGTGTGAAACTACTGAAGATC
. : . : . : . : . : . :
JMSF029H10+ TGTGTTTCGATGTCCCCTATTCAA
JMSF006E06+ TGTGTTTCGATGTCCCCTATTCAA
JMSF010B18+ TGTGTTTCGATGTCCCCTATTCAACACAGT
JMFF019J01+ TGTGTTTCGATGTCCCCTATTCAACACAGTGAAGTCGATGACATTCGTTCATCCGGCTGT
____________________________________________________________
consensus TGTGTTTCGATGTCCCCTATTCAACACAGTGAAGTCGATGACATTCGTTCATCCGGCTGT