Contig 000100:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019J01Sequence545000100 (4)ref|XP_004243544.1|3e-34PREDICTED: SEC12-like protein 2 [Solanum lycopersicum]736013692 (4)ref|XP_009784441.1|7e-42PREDICTED: SEC12-like protein 2 [Nicotiana sylvestris]
JMSF006E06Sequence397000100 (4)ref|XP_004243544.1|5e-22PREDICTED: SEC12-like protein 2 [Solanum lycopersicum]
JMSF010B18Sequence230000100 (4)774013692 (4)ref|XP_009784441.1|1e-67PREDICTED: SEC12-like protein 2 [Nicotiana sylvestris]
JMSF029H10Sequence654000100 (4)ref|XP_004243544.1|5e-51PREDICTED: SEC12-like protein 2 [Solanum lycopersicum]728013692 (4)gb|EYU30065.1|4e-52hypothetical protein MIMGU_mgv1a008031mg [Erythranthe guttata]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029H10+                                          ACACAAGAATGGGCATTGGCCTCATCAAT
                      ____________________________________________________________
consensus                                            ACACAAGAATGGGCATTGGCCTCATCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029H10+           AATAATTTCCATGCTAGGCCATTTGAAAACTCTCAGCTTGCCATCCTCACCACCAACAGC
                      ____________________________________________________________
consensus             AATAATTTCCATGCTAGGCCATTTGAAAACTCTCAGCTTGCCATCCTCACCACCAACAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029H10+           AAGTAGAGAACCCTCATTGTTAAATGTTAGTGCTAATTGCTGTCCAACGTCTTCCAATTG
JMFF019J01+                                                                  AATTG
                      ____________________________________________________________
consensus             AAGTAGAGAACCCTCATTGTTAAATGTTAGTGCTAATTGCTGTCCAACGTCTTCCAATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029H10+           CTTAAGTAATCTCTCAGATAACTTCACACTTAAAGCACCATCATCTGTGTCACTGCCTGC
JMFF019J01+           CTTAAGTAATCTCTCAGATAACTTCACACTTAAAGCACCATCATCTGTGTCACTGCCTGC
                      ____________________________________________________________
consensus             CTTAAGTAATCTCTCAGATAACTTCACACTTAAAGCACCATCATCTGTGTCACTGCCTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029H10+           AT-GCACTCAAACCAACTGCAACTCTTTGGTAAGGAACAAACAAGACCTTCTCCCCCAGG
JMSF006E06+                                                                 CCCAGG
JMFF019J01+           ATCCCACTCAAACCAACTGCAACTCTTTGGTAAGGAAAAAATAAGACCTTCTCCCCCAGG
                      ____________________________________________________________
consensus             ATCGCACTCAAACCAACTGCAACTCTTTGGTAAGGAACAAATAAGACCTTCTCCCCCAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029H10+           GTGGACAGTCATCCTGTAAGGCAGATCACTGCCAGTTCCAAGCCTTGCCACAGGCAGATC
JMSF006E06+           GTGGACAGTCATCCTGTAAGGCAGATCACTGCCAGTTCCAAGCCTTGCCACAGGCAGATC
JMFF019J01+           GTGGACAGTCATCCTGTAAGGCAGATCACTGCCAGTTCCAAGCCTTGCCACAGGCAGATC
                      ____________________________________________________________
consensus             GTGGACAGTCATCCTGTAAGGCAGATCACTGCCAGTTCCAAGCCTTGCCACAGGCAGATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029H10+           GGAGAGAAAGCTGGAATCGAAATCGAATCGAGCTAGAAGGATAGCATTGGGGATACCACT
JMSF006E06+           GGAGAGAAAGCTGGAATCGAAATCGAATCGAGCTAGAAGGATAGCATTGGGGATACCACT
JMFF019J01+           GGAGAGAAAGCTGGAATCGAAATCGAATCGAGCTAGAAGGATAGCATTGGGGATACCACT
                      ____________________________________________________________
consensus             GGAGAGAAAGCTGGAATCGAAATCGAATCGAGCTAGAAGGATAGCATTGGGGATACCACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029H10+           ATTCCCTTCGCCGCCCCCTCCAGCCATGACGACGTAGTTGTGGGTGGCGATCAGAGGCGA
JMSF006E06+           ATTCCCTTCGCCGCCCCCTCCAGCCATGACGACGTAGTTGTGGGTGGCGATCAGAGGCGA
JMSF010B18+                                                          CGATCAGAGGCGA
JMFF019J01+           ATTCCCTTCGCCGCCCCCTCCAGCCATGACGACGTAGTTGTGGGTGGCGATCAGAGGCGA
                      ____________________________________________________________
consensus             ATTCCCTTCGCCGCCCCCTCCAGCCATGACGACGTAGTTGTGGGTGGCGATCAGAGGCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029H10+           CTTGTCGGCGGCGTCCTTATCGTCACCATCTCCCTCTGGCGGCGGTTTGGGAGCAGATCT
JMSF006E06+           CTTGTCGGCGGCGTCCTTATCGTCACCATCTCCCTCTGGCGGCGGTTTGGGAGCAGATCT
JMSF010B18+           CTTGTCGGCGGCGTCCTTATCGTCACCATCTCCCTCTGGCGGCGGTTTGGGAGCAGATCT
JMFF019J01+           CTTGTCGGCGGCGTCCTTATCGTCACCATCTCCCTCTGGCGGCGGTTTGGGAGCAGATCT
                      ____________________________________________________________
consensus             CTTGTCGGCGGCGTCCTTATCGTCACCATCTCCCTCTGGCGGCGGTTTGGGAGCAGATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029H10+           GATGGCGCCAGGTGGAACCCAGGCAGCTCCGTAGACTGGGACCCCATACTTCTTGCAGCT
JMSF006E06+           GATGGCGCCAGGTGGAACCCAGGCAGCTCCGTAGACTGGGACCCCATACTTCTTGCAGCT
JMSF010B18+           GATGGCGCCAGGTGGAACCCAGGCAGCTCCGTAGACTGGGACCCCATACTTCTTGCAGCT
JMFF019J01+           GATGGCGCCAGGTGGAACCCTGGCAGCTCCGTAGACTGGGACCCCATACTTCTTGCAGCT
                      ____________________________________________________________
consensus             GATGGCGCCAGGTGGAACCCAGGCAGCTCCGTAGACTGGGACCCCATACTTCTTGCAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029H10+           TTCATCGTTGGCCATAATCAAGTCTGCGGGTGATCTTAGAGTGTGAAACTACTGAAGATC
JMSF006E06+           TTCATCGTTGGCCATAATCAAGTCTGCGGGTGATCTTAGAGTGTGAAACTACTGAAGATC
JMSF010B18+           TTCATCGTTGGCCATAATCAAGTCTGCGGGTGATCTTAGAGTGTGAAACTACTGAAGATC
JMFF019J01+           TTCATCGTTGGCCATAATCAAGTCTGCGGGTGATCTTAGAGTGTGAAACTACTGAAGATC
                      ____________________________________________________________
consensus             TTCATCGTTGGCCATAATCAAGTCTGCGGGTGATCTTAGAGTGTGAAACTACTGAAGATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029H10+           TGTGTTTCGATGTCCCCTATTCAA                                    
JMSF006E06+           TGTGTTTCGATGTCCCCTATTCAA                                    
JMSF010B18+           TGTGTTTCGATGTCCCCTATTCAACACAGT                              
JMFF019J01+           TGTGTTTCGATGTCCCCTATTCAACACAGTGAAGTCGATGACATTCGTTCATCCGGCTGT
                      ____________________________________________________________
consensus             TGTGTTTCGATGTCCCCTATTCAACACAGTGAAGTCGATGACATTCGTTCATCCGGCTGT