| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018P04 | Sequence | 533 | 000096 (5) | 675 | 008207 (3) | ref|XP_009782632.1| | 3e-37 | PREDICTED: protein IQ-DOMAIN 1 [Nicotiana sylvestris] ref|XP_009782633.1| PREDIC | |||
| JMFF022B09 | Sequence | 468 | 000096 (5) | ||||||||
| JMFF041M09 | Sequence | 651 | 000096 (5) | ref|XP_009630260.1| | 2e-11 | PREDICTED: protein IQ-DOMAIN 1 [Nicotiana tomentosiformis] ref|XP_009630261.1| P | |||||
| JMFF050C21 | Sequence | 576 | 000096 (5) | ref|XP_009630260.1| | 6e-20 | PREDICTED: protein IQ-DOMAIN 1 [Nicotiana tomentosiformis] ref|XP_009630261.1| P | 547 | 008207 (3) | ref|XP_009782632.1| | 9e-30 | PREDICTED: protein IQ-DOMAIN 1 [Nicotiana sylvestris] ref|XP_009782633.1| PREDIC |
| JMSF036B06 | Sequence | 640 | 000096 (5) | ref|XP_009630260.1| | 1e-06 | PREDICTED: protein IQ-DOMAIN 1 [Nicotiana tomentosiformis] ref|XP_009630261.1| P | 748 | 008207 (3) | ref|XP_006350537.1| | 3e-56 | PREDICTED: protein IQ-DOMAIN 1-like isoform X1 [Solanum tuberosum] ref|XP_006350 |
This contig is upended
. : . : . : . : . : . :
JMFF041M09+ GCCTGCTTCCGCACGTTGTGCCCCCTCACCAGC
____________________________________________________________
consensus GCCTGCTTCCGCACGTTGTGCCCCCTCACCAGC
. : . : . : . : . : . :
JMFF050C21+ TGTAGCCTCACCAATCCCTTCAATGCCCGCAACGCCCGCCTGCANAGATATCCCCTG
JMFF041M09+ GCCTGTAGCCTCACCAATCCCTTCAATGCCCGCAACGCCCGCCTTGCAAGATATCCCCTG
JMSF036B06+ CACCAATCCCTTCAATGCCCGCAACGCCCGCCTTGCAAGATATCCCCTG
____________________________________________________________
consensus GCCTGTAGCCTCACCAATCCCTTCAATGCCCGCAACGCCCGCCTTGCAAGATATCCCCTG
. : . : . : . : . : . :
JMFF050C21+ TAATATGACTGTATCATAACGGCAGCTCTGTCCTCGTTAGACTGGCGACCGAAGCCGGCT
JMFF041M09+ TAATATGACTGTATCATAACGGCAGCTCTGTCCTCGTTAGACTGGCGACCGAAGCCGGCT
JMSF036B06+ TAATATGACTGTATCATAACGGCAGCTCTGTCCTCGTTAGACTGGCGACCGAAGCCGGCT
____________________________________________________________
consensus TAATATGACTGTATCATAACGGCAGCTCTGTCCTCGTTAGACTGGCGACCGAAGCCGGCT
. : . : . : . : . : . :
JMFF050C21+ AACCGGATAACCTTAGCGGCCGCCTGGGCCGCCGCAATGGCGGCCTCGGCAGCTGCGGCC
JMFF041M09+ AATCGGATAACCTTAGCGGCCGCCTGGGCCGCCGCAATGGCGGCCTCGGCAGCTGCGGCC
JMSF036B06+ AATCGGATAACCTTAGCGGCCGCCTGGGCCGCCGCAATGGCGGCCTCGGCAGCTGCGGCC
JMFF018P04+ TAACCTTAGCGGCCGCCTGGGCCGCCGCAATGGCGGCCTCGGCAGCTGCGGCC
____________________________________________________________
consensus AATCGGATAACCTTAGCGGCCGCCTGGGCCGCCGCAATGGCGGCCTCGGCAGCTGCGGCC
. : . : . : . : . : . :
JMFF050C21+ GTCGCCACCGCAACGGCAATGGCATGGTCGCGATCCTCGGCCTCCGGAGACGACGGATCT
JMFF041M09+ GTCGCCACCGCAACGGCAATGGCATGGTCGCGATCCTCGGCCTCCGGAGACGACGGATCT
JMSF036B06+ GTCGCCACCGCAACGGCAATGGCATGGTCGCGATCCTCGGCCTCCGGAGACGACGGATCT
JMFF022B09+ AACGGCAATGGCATGGTCGCGATCCTCGGCCTCCGGAGACGACGGATCT
JMFF018P04+ GTCGCCACCGCAACGACAATGGCATGGTCGCGATCCTCGGCCTCCGGAGACGACGGATCT
____________________________________________________________
consensus GTCGCCACCGCAACGGCAATGGCATGGTCGCGATCCTCGGCCTCCGGAGACGACGGATCT
. : . : . : . : . : . :
JMFF050C21+ TCATCACTCTTTCCGTCAGTAACATTAACCGGCGAATCTGGCTCAGCTGGCAAGCGATCA
JMFF041M09+ TCATCACTCTTTCCGTCAGTAACATTAACCGGCGAATCTGGCTCAGCTGGCAAGCGATCA
JMSF036B06+ TCATCACTCTTTCCGTCAGTAACATTAACCGGCGAATCTGGCTCAGCTGGCAAGCGATCA
JMFF022B09+ TCATCACTCTTTCCGTCAGTAACATTAACCGGCGAATCTGGCTCAGCTGGCAAGCGATCA
JMFF018P04+ TCATCACTCTTTCCGTCAGTAACATTAACCGGCGAATCTGGCTCAGCTGGCAAGCGATCA
____________________________________________________________
consensus TCATCACTCTTTCCGTCAGTAACATTAACCGGCGAATCTGGCTCAGCTGGCAAGCGATCA
. : . : . : . : . : . :
JMFF050C21+ AGTGACACCACTTCTGCGGCTTCCCGCTGCCATTTTTGATCTACATTGTTTTCCTTCTTA
JMFF041M09+ AGTGACACCACTTCTGCGGCTTCCCGCTGCCATTTTTGATCTACATTGTTTTCCTTCTTA
JMSF036B06+ AGTGACACCACTTCTGCGGCTTCCCGCTGCCATTTTTGATCTACATTGTTTTCCTTCTTA
JMFF022B09+ AGTGACACCACTTCTGCGGCTTCCCGCTGCCATTTTTGATCTACATTGTTTTCCTTCTTA
JMFF018P04+ AGTGACACCACTTCTGCGGCTTCCCGCTGCCATTTTTGATCTACATTGTTTTCCTTCTTA
____________________________________________________________
consensus AGTGACACCACTTCTGCGGCTTCCCGCTGCCATTTTTGATCTACATTGTTTTCCTTCTTA
. : . : . : . : . : . :
JMFF050C21+ TCCCGTGAAGAGCTTTTGAACACTTTCTTCACGCTGGAAAACCAGCCACTCCCTATCTTC
JMFF041M09+ TCCCGTGAAGAGCTTTTGAACACTTTCTTCACGCTGGAAAACCAGCCACTCCCTATCTTC
JMSF036B06+ TCCCGTGAAGAGCTTTTGAACACTTTCTTCACGCTGGAAAACCAGCCACTCCCTATCTTC
JMFF022B09+ TCCCGTGAAGAGCTTTTGAACACTTTCTTCACGCTGGAAAACCAGCCACTCCCTATCTTC
JMFF018P04+ TCCCGTGAAGAGCTTTTGAACACTTTCTTCACGCTGGAAAACCAGCCACTCCCTATCTTC
____________________________________________________________
consensus TCCCGTGAAGAGCTTTTGAACACTTTCTTCACGCTGGAAAACCAGCCACTCCCTATCTTC
. : . : . : . : . : . :
JMFF050C21+ CCCATCTCCACCGACGCTTAACCATGAAAGTCGCCAAGATCTGA
JMFF041M09+ CCCATCTCCACCGACGCTTAACCATGAAAGTCGCCAAGATCTGATCGAATAAAATTATTG
JMSF036B06+ CCCATCTCCACCGACGCTTAACCATGAAAGTCGCCAAGATCTGATCGAATAAAATTATTG
JMFF022B09+ CCCATCTCCACCGACGCTTAACCATGAAAGTCGCCAAGATCTGATCGAATAAAATTATTG
JMFF018P04+ CCCATCTCCACCGACGCTTAACCATGAAAGTCGCCAAGATCTGATCGAATAAAATTATTG
____________________________________________________________
consensus CCCATCTCCACCGACGCTTAACCATGAAAGTCGCCAAGATCTGATCGAATAAAATTATTG
. : . : . : . : . : . :
JMFF041M09+ ATTAAACTATCAGGTAGTGTTTTGGACGGCACCTGTGGTCTTCACTGACATGTCTTGAAA
JMSF036B06+ ATTAAACTATCAGGTAGTGTTTTGGACGGCACCTGTGGTCTTCACTGACATGTCTTGAAA
JMFF022B09+ ATTAAACTATCAGGTAGTGTTTTGGACGGCACCTGTGGTCTTCACTGACATGTCTTGAAA
JMFF018P04+ ATTAAACTATCAGGTAGTGTTTTGGACGGCACCTGTGGTCTTCACTGACATGTCTTGAAA
____________________________________________________________
consensus ATTAAACTATCAGGTAGTGTTTTGGACGGCACCTGTGGTCTTCACTGACATGTCTTGAAA
. : . : . : . : . : . :
JMFF041M09+ GCTTGGATTGTAGAGAGTGAGGGAATGAAAGAAATTTTTGTACAGAGATGGTGTCTGTTG
JMSF036B06+ GCTTGGATTGTAGAGAGTGAGGGAATGAAAGAAATTTTTGTACAGAGATGGTGTCTGTTG
JMFF022B09+ GCTTGGATTGTAGAGAGTGAGGGAATGAAAGAAATTTTTGTACAGAGATGGTGTCTGTTG
JMFF018P04+ GCTTGGATTGTAGAGAGTGAGGGAATGAAAGAAATTTTTGTACAGAGATGGTGTCTGTTG
____________________________________________________________
consensus GCTTGGATTGTAGAGAGTGAGGGAATGAAAGAAATTTTTGTACAGAGATGGTGTCTGTTG
. : . : . : . : . : . :
JMFF041M09+ TTCAGAGAGAGAGAGAAT
JMSF036B06+ TTCAGAGAGAGAGAGAATGAAGAAATGAATAATATTTACGAGTAAAAGAC
JMFF022B09+ TTCAGAGAGAGAGAGAATGAAGAAATGAATAATATTTACGAGTAAAAGACAGCACTAAC
JMFF018P04+ TTCAGAGAGAGAGAGAATGAAGAAATGAATAATATTTACGAGTAAAAGACAGCACTAACT
____________________________________________________________
consensus TTCAGAGAGAGAGAGAATGAAGAAATGAATAATATTTACGAGTAAAAGACAGCACTAACT