clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF009A08 | Sequence | 515 | 000094 (25) | ref|XP_011092274.1| | 9e-73 | PREDICTED: cytochrome c [Sesamum indicum] | 649 | 000094 (25) | ref|XP_011092274.1| | 6e-72 | PREDICTED: cytochrome c [Sesamum indicum] |
JMFF011H15 | Sequence | 538 | 000094 (25) | ref|XP_011092274.1| | 1e-72 | PREDICTED: cytochrome c [Sesamum indicum] | 640 | 000094 (25) | ref|XP_011092274.1| | 4e-72 | PREDICTED: cytochrome c [Sesamum indicum] |
JMFF018J07 | Sequence | 544 | 000094 (25) | ref|XP_011092274.1| | 1e-72 | PREDICTED: cytochrome c [Sesamum indicum] | 642 | 000094 (25) | ref|XP_011092274.1| | 3e-72 | PREDICTED: cytochrome c [Sesamum indicum] |
JMFF026P08 | Sequence | 576 | 000094 (25) | ref|XP_011092274.1| | 2e-72 | PREDICTED: cytochrome c [Sesamum indicum] | 690 | 000094 (25) | ref|XP_011092274.1| | 7e-72 | PREDICTED: cytochrome c [Sesamum indicum] |
JMFF044L02 | Sequence | 651 | 000094 (25) | ref|XP_011092274.1| | 5e-72 | PREDICTED: cytochrome c [Sesamum indicum] | 588 | 000094 (25) | gb|KJB77967.1| | 4e-64 | hypothetical protein B456_012G170200 [Gossypium raimondii] gb|KJB77969.1| hypoth |
JMFF045H16 | Sequence | 620 | 000094 (25) | ref|XP_011092274.1| | 3e-72 | PREDICTED: cytochrome c [Sesamum indicum] | 588 | 000094 (25) | gb|KJB77967.1| | 2e-65 | hypothetical protein B456_012G170200 [Gossypium raimondii] gb|KJB77969.1| hypoth |
JMFN008B01 | Sequence | 625 | 000094 (25) | ref|XP_011092274.1| | 3e-72 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN013N17 | Sequence | 159 | 000094 (25) | ref|XP_011092274.1| | 2e-13 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN014L20 | Sequence | 594 | 000094 (25) | gb|KJB77967.1| | 6e-67 | hypothetical protein B456_012G170200 [Gossypium raimondii] gb|KJB77969.1| hypoth | |||||
JMFN018D02 | Sequence | 625 | 000094 (25) | ref|XP_011092274.1| | 4e-72 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN019O18 | Sequence | 589 | 000094 (25) | ref|XP_011092274.1| | 2e-72 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN028E08 | Sequence | 667 | 000094 (25) | ref|XP_011092274.1| | 4e-71 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN029I05 | Sequence | 590 | 000094 (25) | ref|XP_011092274.1| | 3e-72 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN029K10 | Sequence | 452 | 000094 (25) | ref|XP_011092274.1| | 4e-73 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN029M12 | Sequence | 589 | 000094 (25) | ref|XP_011092274.1| | 3e-72 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN035F02 | Sequence | 493 | 000094 (25) | ref|XP_011092274.1| | 6e-73 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN037E20 | Sequence | 612 | 000094 (25) | ref|XP_011092274.1| | 2e-72 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN038D23 | Sequence | 618 | 000094 (25) | ref|XP_011092274.1| | 2e-72 | PREDICTED: cytochrome c [Sesamum indicum] | |||||
JMFN043L19 | Sequence | 561 | 000094 (25) | ref|XP_011092274.1| | 2e-72 | PREDICTED: cytochrome c [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMFF045H16- ACTTGACGTCTTATTAATGAATTATAATCAGCCTAA
rJMFF044L02- ACTTGACGTCTTATTAATGAATTATAATCAGCCTAA
JMFN014L20- ATTGAACTTGACGTCTTATTAATGAATTATAATCAGCCTAA
JMFN028E08+ ATTAATGAATTATAATCAGCCTAA
rJMFF009A08- TCTTATTAATGAATTATAATCAGCCTAA
rJMFF026P08- ACTTGACGTCTTATTAATGAATTATAATCAGCCTAA
____________________________________________________________
consensus ATTGAACTTGACGTCTTATTAATGAATTATAATCAGCCTAA
. : . : . : . : . : . :
rJMFF045H16- ACAAAAGGGAAGTATGCACTTCGATGTATTGAAGTCTAAAAGAATGTCATAGAAGTACAG
rJMFF044L02- ACAAAAGGGAAGTATGCACTTCGATGTATTGAAGTCTAAAAGAATGTCATAGAAGTACAG
JMFN014L20- ACAAAAGGGAAGTATGCACTTCGATGTATTGAAGTCTAAAAGAATGTCATAGAAGTACAG
JMFN028E08+ ACAAAAGGGAAGTATGCACTTCGATGTATTGAAGTCTAAAAGAATGTCATAGAAGTACAG
rJMFF009A08- ACAAAAGGGAAGTATGCACTTCGATGTATTGAAGTCTAAAAGAATGTCATAGAAGTACAG
rJMFF011H15- TGCACTTCGATGTATTGAAGTCTAAAAGAATGTCATAGAAGTACAG
JMFF044L02+ ACAAAAGGGAAGTATGCACTTCGATGTATGAAGTTCTAAAAGAATGTCATAGAAGTACAG
JMFN008B01+ AGGGAAGTATGCACTTCGATGTATTGAAGTCTAAAAGAATGTCATAGAAGTACAG
JMFN029M12+ GTCTAAAAGAATGTCATAGAAGTACAG
JMFN038D23+ CGATGTATTGAAGTCTAAAAGAATGTCATAGAAGTACAG
JMFN029I05+ CTTCGATGTATGAAAGTCTAAAAGAATGTCATAGAAGTACAG
JMFN037E20+ CTTCGATGTATTGAAGTCTAAAAGAATGTCATAGAAGTACAG
JMFN018D02+ ACAAAAGGGAAGTATGCACTTCGATGTA-TGAAGTCTAAAAGAATGTCATAGAAGTACAG
rJMFF026P08- ACAAAAGGGAAGTATGCACTTCGATGTATTGAAGTCTAAAAGAATGTCATAGAAGTACAG
JMFF045H16+ AAAAGAATGTCATAGAAGTACAG
JMFN019O18+ AAAAGAATGTCATAGAAGTACAG
rJMFF018J07- CTTCGATGTATTGAAGTCTAAAAGAATGTCATAGAAGTACAG
____________________________________________________________
consensus ACAAAAGGGAAGTATGCACTTCGATGTATTGAAGTCTAAAAGAATGTCATAGAAGTACAG
. : . : . : . : . : . :
rJMFF045H16- CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
rJMFF044L02- CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
JMFN014L20- CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
JMFN028E08+ CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
rJMFF009A08- CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
rJMFF011H15- CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
JMFF044L02+ CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
JMFN008B01+ CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
JMFN029M12+ CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
JMFN038D23+ CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
JMFN029I05+ CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
JMFN037E20+ CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
JMFN018D02+ CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
JMFF026P08+ AACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
JMFN043L19+ ACCAGAGTATAGATAAGTAGCAATAAAACCTTATCGGTTGG
JMFF011H15+ TTGG
JMFF009A08+ TGG
rJMFF026P08- CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
JMFF045H16+ CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
JMFN019O18+ CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
rJMFF018J07- CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
JMFF018J07+ TTGG
____________________________________________________________
consensus CCACTACTGGCCTATCTCAACCAGAGTATAGATAAGTAGCAATAAAACCTTTACGGTTGG
. : . : . : . : . : . :
rJMFF045H16- GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
rJMFF044L02- GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
JMFN014L20- GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
JMFN028E08+ GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
rJMFF009A08- GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
rJMFF011H15- GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
JMFF044L02+ GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
JMFN008B01+ GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
JMFN029M12+ GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
JMFN038D23+ GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
JMFN029I05+ GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
JMFN037E20+ GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
JMFN018D02+ GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
JMFF026P08+ GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
JMFN043L19+ GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
JMFF011H15+ GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
JMFN035F02+ GGCAAGAAAATTGGCATCCACCAAAAGAATTGAAAACTGGACGAG
JMFN029K10+ CCAAAAGAATTGAAAACTGGACGAG
JMFF009A08+ GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
rJMFF026P08- GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
JMFF045H16+ GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
JMFN019O18+ GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
rJMFF018J07- GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
JMFF018J07+ GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
____________________________________________________________
consensus GTTCACAATATTATTGGCAAGAAAATTGACATCCACCAAAAGAATTGAAAACTGGACGAG
. : . : . : . : . : . :
rJMFF045H16- TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
rJMFF044L02- TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFN014L20- TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFN028E08+ TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
rJMFF009A08- TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
rJMFF011H15- TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFF044L02+ TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFN008B01+ TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFN029M12+ TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFN038D23+ TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFN029I05+ TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFN037E20+ TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFN018D02+ TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFF026P08+ TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFN043L19+ TGGTCATTTTTCCAATCATCACTACTCAAAAAAACATCATTCTTCTACAAAATGCATTTC
JMFF011H15+ TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFN035F02+ TGGTCATTTTTCCAATCATCACTGCTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFN029K10+ TGGTCATTTTTCCAATCATCAGTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFF009A08+ TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
rJMFF026P08- TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFF045H16+ TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFN019O18+ TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
rJMFF018J07- TGGCCATTTTTCCAATCATCACCACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
JMFF018J07+ TGGCCATTTTTCCAATCATCACCACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
____________________________________________________________
consensus TGGTCATTTTTCCAATCATCACTACTCAAAAAATCCTCATTCAACTACAAAATGCATTTC
. : . : . : . : . : . :
rJMFF045H16- AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
rJMFF044L02- AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFN014L20- AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFN028E08+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
rJMFF009A08- AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
rJMFF011H15- AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFF044L02+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFN008B01+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFN029M12+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFN038D23+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFN029I05+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFN037E20+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFN018D02+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFF026P08+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFN043L19+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFF011H15+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFN035F02+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFN029K10+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFF009A08+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
rJMFF026P08- AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFF045H16+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFN019O18+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
rJMFF018J07- AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
JMFF018J07+ AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
____________________________________________________________
consensus AGGCAGTTGATTCCTTGAGATATGCTATGAGATCTGCACGGTCCTGTGGCTTCTTCAATC
. : . : . : . : . : . :
rJMFF045H16- CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
rJMFF044L02- CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFN014L20- CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFN028E08+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
rJMFF009A08- CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
rJMFF011H15- CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFF044L02+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFN008B01+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFN029M12+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFN038D23+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFN029I05+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFN037E20+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFN018D02+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFF026P08+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFN043L19+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFF011H15+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFN035F02+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFN029K10+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFF009A08+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
rJMFF026P08- CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFF045H16+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFN019O18+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
rJMFF018J07- CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
JMFF018J07+ CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
____________________________________________________________
consensus CAGGGAAAACCATCTTGGTTCCAGGAATATACTTCTTGGGGTTAAGCAAGTAGTCATATA
. : . : . : . : . : . :
rJMFF045H16- GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
rJMFF044L02- GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFN014L20- GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFN028E08+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
rJMFF009A08- GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
rJMFF011H15- GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFF044L02+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFN008B01+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFN029M12+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFN038D23+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFN029I05+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFN037E20+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFN018D02+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFF026P08+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFN043L19+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFF011H15+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFN035F02+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFN029K10+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFF009A08+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
rJMFF026P08- GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFF045H16+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFN019O18+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
rJMFF018J07- GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
JMFF018J07+ GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
____________________________________________________________
consensus GTGTGTTCTCTCCCCAGGTGACAGCCATGTTCTTGTTGGCAGCAGAGTAAGAGTAACCTG
. : . : . : . : . : . :
rJMFF045H16- GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
rJMFF044L02- GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFN014L20- GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFN028E08+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
rJMFF009A08- GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
rJMFF011H15- GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFF044L02+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFN008B01+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFN029M12+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFN038D23+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFN029I05+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFN037E20+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFN018D02+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFF026P08+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFN043L19+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFF011H15+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFN035F02+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFN029K10+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFF009A08+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
rJMFF026P08- GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFF045H16+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFN019O18+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
rJMFF018J07- GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
JMFN013N17+ GG
JMFF018J07+ GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
____________________________________________________________
consensus GAGTTGTACCGGATTGTCTGCCGAATAGTCCATTCAAGTTAGGCCCTTGCTTGTGGCCGG
. : . : . : . : . : . :
rJMFF045H16- CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
rJMFF044L02- CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCC
JMFN014L20- CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFN028E08+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
rJMFF009A08- CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
rJMFF011H15- CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFF044L02+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFN008B01+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFN029M12+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFN038D23+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFN029I05+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFN037E20+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFN018D02+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFF026P08+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFN043L19+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFF011H15+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFN035F02+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFN029K10+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFF009A08+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
rJMFF026P08- CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFF045H16+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFN019O18+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
rJMFF018J07- CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFN013N17+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
JMFF018J07+ CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
____________________________________________________________
consensus CGCCTTTGTCAACGGTGTGGCACTGAGCGCACTTCATTTTGAAGATCTTCTCTCCGGATT
. : . : . : . : . : . :
rJMFF045H16- TGGCATC
JMFN014L20- TGGCATCGCCGGG
JMFN028E08+ TGGCATCGCCGGGCGGAGCTTCATTGAAGAAGGCCATGAGTACGAACCAAAAGAGGATTT
rJMFF009A08- TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
rJMFF011H15- TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
JMFF044L02+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
JMFN008B01+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
JMFN029M12+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
JMFN038D23+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
JMFN029I05+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
JMFN037E20+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
JMFN018D02+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
JMFF026P08+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
JMFN043L19+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
JMFF011H15+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
JMFN035F02+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
JMFN029K10+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGG
JMFF009A08+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
rJMFF026P08- TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
JMFF045H16+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
JMFN019O18+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
rJMFF018J07- TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
JMFN013N17+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
JMFF018J07+ TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
____________________________________________________________
consensus TGGCATCGCCGGGCGGAGCTTCATTGAAGGAGGCCATGAGTACGAACCAAAAGAGGATTT
. : . : . : . : . : . :
JMFN028E08+ GCGGAGTTTGGTATCGGGAGAAACGAGAAACGAAGAGCG
rJMFF009A08- GCGGAGTTTGGTATCGGGAGA
rJMFF011H15- GCGGAGTTTGGTATCGGGAGAAACGAGAAACGAAGAGCGGCGAGGGAGTTTGGT
JMFF044L02+ GCGGAGTTTGGTATCGGGAGAAACGAGAAACGAAGAGCGGCGAGGGAGTTT
JMFN008B01+ GCGGAGTTTGGTATCGGGAGAAACGAGAAA
JMFN029M12+ GCGGAGTTTGGTATCGGGAGAA
JMFN038D23+ GCGGAGTTTGGTATCGGGAGAAACGAGAAACGAAGAGCG
JMFN029I05+ GCGGAGTT
JMFN037E20+ GCGGAGTTTGGTATCGGGAGAAACGAGAAA
JMFN018D02+ GCGGAGTTTGGTATCGGGAGAAACGA
JMFF026P08+ GCGGAGTTTGGTATCGGGAGAAACGAGAAACGAAGAGCGGCGAGGGAGTTTGGT
JMFN043L19+ GCGGAGTTTGGTATCGGGAGAAACGAGAAACGAAGAGCGG
JMFF011H15+ GCGGAGTTTGGTATCGGGAGAAACGAGAAACGAAGAGCGGCGAGGGAGTTTGGT
JMFN035F02+ GCGGAGTTTGGTATCGGGAGAAACGAGA
JMFF009A08+ GCGGAGTTTGGTATCGGGAGAAACGAGAAA
rJMFF026P08- GCGGAGTTTGGTATCGGGAGAAACGAGAAACGAAGAGCGGCGAGGGAGTTTGGT
JMFF045H16+ GCGGAGTTTGGTATCGGGAGAAACGAGAAACGAAGAGCGGCGAGGGAGTTTGGT
JMFN019O18+ GCGGAGTTTGGTATCGGGAGAAACGA
rJMFF018J07- GCGGAGTTTGGTATCGGGAGAAACGAGAAACGAAGAGCGGCGAGGGAGTTTGGT
JMFN013N17+ GCGGAGTTTGGTATCGGGAGAAACGAGAAACGAAGAG
JMFF018J07+ GCGGAGTTTGGTATCGGGAGAAACGAGAAACGAAGAGCGGCGAGGGAGTTTGGTGAAGAG
____________________________________________________________
consensus GCGGAGTTTGGTATCGGGAGAAACGAGAAACGAAGAGCGGCGAGGGAGTTTGGTGAAGAG