| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011M03 | Sequence | 550 | 000070 (4) | ref|XP_009800487.1| | 2e-64 | PREDICTED: acetylornithine aminotransferase, mitochondrial [Nicotiana sylvestri | 720 | 002688 (9) | ref|XP_011082096.1| | 9e-91 | PREDICTED: acetylornithine aminotransferase, chloroplastic/mitochondrial-like [ |
| JMFF014O13 | Sequence | 579 | 000070 (4) | ref|XP_009800487.1| | 1e-31 | PREDICTED: acetylornithine aminotransferase, mitochondrial [Nicotiana sylvestri | 678 | 002688 (9) | ref|XP_011082096.1| | 5e-81 | PREDICTED: acetylornithine aminotransferase, chloroplastic/mitochondrial-like [ |
| JMFF041B20 | Sequence | 650 | 000070 (4) | ref|XP_009628466.1| | 1e-90 | PREDICTED: acetylornithine aminotransferase, mitochondrial [Nicotiana tomentosi | 583 | 002688 (9) | ref|XP_002530446.1| | 2e-52 | acetylornithine aminotransferase, putative [Ricinus communis] gb|EEF31916.1| ace |
| JMFF045E14 | Sequence | 263 | 000070 (4) | 659 | 002688 (9) | ref|XP_002530446.1| | 5e-60 | acetylornithine aminotransferase, putative [Ricinus communis] gb|EEF31916.1| ace | |||
This contig is upended
. : . : . : . : . : . :
JMFF041B20+ AATTGGAGAAGGCAATAAACTCCACAGGAGGCTGCTCCATGTCAGGATGTGAAA
____________________________________________________________
consensus AATTGGAGAAGGCAATAAACTCCACAGGAGGCTGCTCCATGTCAGGATGTGAAA
. : . : . : . : . : . :
JMFF041B20+ ATCTCTGGAACTTCCTTGCAAACTTAATTGCAGCTTCATTTGCTTCAGTCCCAGAATTTG
JMFF011M03+ ATTTG
____________________________________________________________
consensus ATCTCTGGAACTTCCTTGCAAACTTAATTGCAGCTTCATTTGCTTCAGTCCCAGAATTTG
. : . : . : . : . : . :
JMFF041B20+ AGAAGAAAACACGGTCAGCAAATGAGCAACCAACAAGGCGTTTTGCCAGTTCAACCTGCG
JMFF011M03+ AGAAGAAAACACGGTCAGCAAATGAGCANCCAACAAGGCGTTTTGCCAGTTCAACCTGCG
____________________________________________________________
consensus AGAAGAAAACACGGTCAGCAAATGAGCAACCAACAAGGCGTTTTGCCAGTTCAACCTGCG
. : . : . : . : . : . :
JMFF041B20+ GAAGTGAATGGTAGATATTGCTGACGTGAGTTAGGATATTAGCCTGTTGGGTAACCGCCC
JMFF011M03+ GAAGTGAATGGTAGATATTGCTGACGTGAGTTAGGATATTAGCCTGTTGGGTAACCGCCC
____________________________________________________________
consensus GAAGTGAATGGTAGATATTGCTGACGTGAGTTAGGATATTAGCCTGTTGGGTAACCGCCC
. : . : . : . : . : . :
JMFF041B20+ GGACCCAATCGGGATCGGCATGGCCGAGGGCATTGACGGCAATCCCAGAGGTCAAGTCCA
JMFF011M03+ GGACCCAATCGGGATCGGCATGGCCGAGGGCATTGACGGCAATCCCAGAGGTCAAGTCCA
JMFF014O13+ GGCCGAGGGCATTGACGGCAATCCCAGAGGTCAAGTCCA
____________________________________________________________
consensus GGACCCAATCGGGATCGGCATGGCCGAGGGCATTGACGGCAATCCCAGAGGTCAAGTCCA
. : . : . : . : . : . :
JMFF041B20+ AGTACTCTCGCCCTTCAACATCGTACAATTTACAGCCTTTGCCACTAGAAAGCACCAGGG
JMFF011M03+ AGTACTCTCGCCCTTCAACATCGTACAATTTACAGCCTTTGCCACTAGAAAGCACCAGGG
JMFF014O13+ AGTACTCTCGCCCTTCAACATCGTACAATTTACAGCCTTTGCCACTAGAAAGCACCAGGG
____________________________________________________________
consensus AGTACTCTCGCCCTTCAACATCGTACAATTTACAGCCTTTGCCACTAGAAAGCACCAGGG
. : . : . : . : . : . :
JMFF041B20+ GAGCTCTGGCATAGGTCCCCACGAAATACCTAGCAGATTCCTCCATAATCTCCCTGCTTT
JMFF011M03+ GAGCTCTGGCATAGGTCCCCACGAAATACCTAGCAGATTCCTCCATAATCTCCCTGCTTT
JMFF014O13+ GAGCTCTGGCATAGGTCCCCACGAAATACCTAGCAGATTCCTCCATAATCTCCCTGCTTT
____________________________________________________________
consensus GAGCTCTGGCATAGGTCCCCACGAAATACCTAGCAGATTCCTCCATAATCTCCCTGCTTT
. : . : . : . : . : . :
JMFF041B20+ TCTCCCCGATTCCCAACTCCGCCGCCCCGGAATCCGGTGCGCGCGTTTCCACGTTGAGGC
JMFF011M03+ TCTCCCCGATTCCCAACTCCGCCGCCCCGGAATCCGGTGCGCGCGTTTCCACGTTGAGGC
JMFF014O13+ TCTCCCCGATTCCCAACTCCGCCGCCCCGGAATCCGGTGCGCGCGTTTCCACGTTGAGGC
____________________________________________________________
consensus TCTCCCCGATTCCCAACTCCGCCGCCCCGGAATCCGGTGCGCGCGTTTCCACGTTGAGGC
. : . : . : . : . : . :
JMFF041B20+ ACGCCACCACTCTCCCGCCGCCATTGCAATGAGGGATTGCGAGTCTCCTGTACTGCGGAA
JMFF011M03+ ACGCCACCACTCTCCCGCCGCCATTGCAATGAGGGATTGCGAGTCTCCTGTACTGCGGAA
JMFF045E14+ ATTGCAATGAGGGATTGAGAGTCTCGTGTATTGCGGAA
JMFF014O13+ ACGCCACCACTCTCCCGCCGCCATTGCAATGAGGGATTGCGAGTCTCCTGTACTGCGGAA
____________________________________________________________
consensus ACGCCACCACTCTCCCGCCGCCATTGCAATGAGGGATTGCGAGTCTCCTGTACTGCGGAA
. : . : . : . : . : . :
JMFF041B20+ AGAGATTGGTCGCGCGGCGGAACTTATTGGCCGCCGGCGAAAGCGGATTGTGGTTGGTGA
JMFF011M03+ AGAGATTGGTCGCGCGGCGGAACTTATTGGCCGCCGGCGAAAGCGGATTGTGGTTGGTGA
JMFF045E14+ AGAGATTGGTCGCGCGGCGGAACTTATTGGCCGCCGGCGAAAGCGGATTGTGGTTGGTGA
JMFF014O13+ AGAGATTGGTCGCGCGGCGGAACTTATTGGCCGCCGGCGAAAGCGGATTGTGGTTGGTGA
____________________________________________________________
consensus AGAGATTGGTCGCGCGGCGGAACTTATTGGCCGCCGGCGAAAGCGGATTGTGGTTGGTGA
. : . : . : . : . : . :
JMFF041B20+ ATAGGTTGGCTGAGCAGCTCATTATTGATCAGCGAAGAAGACGAATAGAACAAGCT
JMFF011M03+ ATAGGTTGGCTGAGCAGCTCATTATTGATCAGCGAAGAAGACGAATAGAACAAGCTTTGG
JMFF045E14+ ATAGGTTGGGTGAGCAGCTCATTATTGATCAGCGAAGAAGAGGAATAGAACAAGCTTTGG
JMFF014O13+ ATAGGTTGGCTGAGCAGCTCATTATTGATCAGCGAAGAAGACGAATAGAACAAGCTTTGG
____________________________________________________________
consensus ATAGGTTGGCTGAGCAGCTCATTATTGATCAGCGAAGAAGACGAATAGAACAAGCTTTGG
. : . : . : . : . : . :
JMFF011M03+ AAAAT
JMFF045E14+ AAAATGGGGGAAGTGTGGAGTGGGGAGGTTTTGACGGTTCTATTTAAGGGTGCGTTTGGT
JMFF014O13+ AAAATGGCGGAAGTGTGGAGTGGGGAGGTTTTGACGCTTCTATTTAAGGGTGCGTTTGGT
____________________________________________________________
consensus AAAATGGGGGAAGTGTGGAGTGGGGAGGTTTTGACGGTTCTATTTAAGGGTGCGTTTGGT
. : . : . : . : . : . :
JMFF045E14+ AGGGACAAAGGGAAAGCGAGAAACGCGGTTATTAGAGATTCCCAT
JMFF014O13+ AGGGACAAAGGGAAAACGAGAAACACGGCTACTAGAGATTCCCATCCAAACAAATCTCTG
____________________________________________________________
consensus AGGGACAAAGGGAAAGCGAGAAACGCGGTTATTAGAGATTCCCATCCAAACAAATCTCTG
. : . : . : . : . : . :
JMFF014O13+ CGCACATTCTACCTCCATAATTCCTGAGCTCGTGATTTTGGAGTGTAAAATATAATAGTT
____________________________________________________________
consensus CGCACATTCTACCTCCATAATTCCTGAGCTCGTGATTTTGGAGTGTAAAATATAATAGTT