clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF003O11 | Sequence | 524 | 000051 (9) | ref|XP_009620767.1| | 1e-74 | PREDICTED: uncharacterized protein At3g15000, mitochondrial isoform X6 [Nicotia | |||||
JMFF006P09 | Sequence | 533 | 000051 (9) | ref|XP_009620762.1| | 2e-76 | PREDICTED: uncharacterized protein At3g15000, mitochondrial isoform X1 [Nicotia | 703 | 003969 (8) | |||
JMFF011B24 | Sequence | 525 | 000051 (9) | ref|XP_009803761.1| | 6e-76 | PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nicotiana syl | 684 | 003969 (8) | |||
JMFF014B05 | Sequence | 524 | 000051 (9) | ref|XP_009803761.1| | 6e-76 | PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nicotiana syl | 474 | 003969 (8) | |||
JMFF019I06 | Sequence | 525 | 000051 (9) | ref|XP_009803761.1| | 6e-76 | PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nicotiana syl | 616 | 003969 (8) | |||
JMFF026A13 | Sequence | 566 | 000051 (9) | ref|XP_009620765.1| | 1e-83 | PREDICTED: uncharacterized protein At3g15000, mitochondrial isoform X4 [Nicotia | |||||
JMFF029K03 | Sequence | 525 | 000051 (9) | ref|XP_009803761.1| | 4e-59 | PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nicotiana syl | 661 | 003969 (8) | |||
JMFF034L06 | Sequence | 521 | 000051 (9) | ref|XP_009803761.1| | 4e-75 | PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nicotiana syl | 666 | 003969 (8) | |||
JMFF037A24 | Sequence | 627 | 000051 (9) | ref|XP_009620765.1| | 8e-101 | PREDICTED: uncharacterized protein At3g15000, mitochondrial isoform X4 [Nicotia | 650 | 003969 (8) |
This contig is upended
. : . : . : . : . : . :
JMFF037A24+ GATCATATGGTACAGCTTGCCCATTTAT
____________________________________________________________
consensus GATCATATGGTACAGCTTGCCCATTTAT
. : . : . : . : . : . :
JMFF026A13+ ACATCCAAATAAGAATCTGGGAGCACCCA
JMFF037A24+ AAATGGCTCTCCTCCATAGTCCTTGTTTTTAACATCCAAATAAGAATCTGGGAGCACCCA
____________________________________________________________
consensus AAATGGCTCTCCTCCATAGTCCTTGTTTTTAACATCCAAATAAGAATCTGGGAGCACCCA
. : . : . : . : . : . :
JMFF026A13+ CCGAACTCCTTTTAATTCTTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
JMFF006P09+ AATTCTTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
JMFF003O11+ AATTCTTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
JMFF037A24+ CCGAACTCCTTTTAATTCTTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
JMFF019I06+ ATTCTTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
JMFF014B05+ TTCTTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
JMFF034L06+ TTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
JMFF029K03+ TTCTTTCAATTGGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
JMFF011B24+ ATTCTTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
____________________________________________________________
consensus CCGAACTCCTTTTAATTCTTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
. : . : . : . : . : . :
JMFF026A13+ TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
JMFF006P09+ TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
JMFF003O11+ TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
JMFF037A24+ TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
JMFF019I06+ TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
JMFF014B05+ TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
JMFF034L06+ TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
JMFF029K03+ TGCATAATAATGCCCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
JMFF011B24+ TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
____________________________________________________________
consensus TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
. : . : . : . : . : . :
JMFF026A13+ CAACCACCTGAGCTGAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
JMFF006P09+ CAACCACCTGAGCTAAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
JMFF003O11+ CAACCACCTGAGCTGAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
JMFF037A24+ CAACCACCTGAGCTAAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
JMFF019I06+ CAACCACCTGAGCTAAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
JMFF014B05+ CAACCACCTGAGCTAAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
JMFF034L06+ CAACCACCTGAGCTAAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
JMFF029K03+ CAACCACCTGAGCTAAGGTTTTGATNTAACTATCAATAATCTCATCTCTTGTCGGATCGC
JMFF011B24+ CAACCACCTGAGCTAAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
____________________________________________________________
consensus CAACCACCTGAGCTAAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
. : . : . : . : . : . :
JMFF026A13+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
JMFF006P09+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
JMFF003O11+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
JMFF037A24+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
JMFF019I06+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
JMFF014B05+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
JMFF034L06+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
JMFF029K03+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
JMFF011B24+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
____________________________________________________________
consensus CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
. : . : . : . : . : . :
JMFF026A13+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
JMFF006P09+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
JMFF003O11+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
JMFF037A24+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
JMFF019I06+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
JMFF014B05+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
JMFF034L06+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
JMFF029K03+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
JMFF011B24+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
____________________________________________________________
consensus TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
. : . : . : . : . : . :
JMFF026A13+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
JMFF006P09+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
JMFF003O11+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
JMFF037A24+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
JMFF019I06+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
JMFF014B05+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
JMFF034L06+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
JMFF029K03+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
JMFF011B24+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
____________________________________________________________
consensus GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
. : . : . : . : . : . :
JMFF026A13+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
JMFF006P09+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
JMFF003O11+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
JMFF037A24+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
JMFF019I06+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
JMFF014B05+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
JMFF034L06+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
JMFF029K03+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
JMFF011B24+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
____________________________________________________________
consensus GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
. : . : . : . : . : . :
JMFF026A13+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
JMFF006P09+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
JMFF003O11+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
JMFF037A24+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
JMFF019I06+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
JMFF014B05+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
JMFF034L06+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
JMFF029K03+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
JMFF011B24+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
____________________________________________________________
consensus GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
. : . : . : . : . : . :
JMFF026A13+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGAT
JMFF006P09+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGATAG
JMFF003O11+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGAT
JMFF037A24+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGATAG
JMFF019I06+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGATA
JMFF014B05+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGATA
JMFF034L06+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGATAG
JMFF029K03+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGA
JMFF011B24+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGATAG
____________________________________________________________
consensus ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGATAG