Contig 000051:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003O11Sequence524000051 (9)ref|XP_009620767.1|1e-74PREDICTED: uncharacterized protein At3g15000, mitochondrial isoform X6 [Nicotia
JMFF006P09Sequence533000051 (9)ref|XP_009620762.1|2e-76PREDICTED: uncharacterized protein At3g15000, mitochondrial isoform X1 [Nicotia703003969 (8)
JMFF011B24Sequence525000051 (9)ref|XP_009803761.1|6e-76PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nicotiana syl684003969 (8)
JMFF014B05Sequence524000051 (9)ref|XP_009803761.1|6e-76PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nicotiana syl474003969 (8)
JMFF019I06Sequence525000051 (9)ref|XP_009803761.1|6e-76PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nicotiana syl616003969 (8)
JMFF026A13Sequence566000051 (9)ref|XP_009620765.1|1e-83PREDICTED: uncharacterized protein At3g15000, mitochondrial isoform X4 [Nicotia
JMFF029K03Sequence525000051 (9)ref|XP_009803761.1|4e-59PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nicotiana syl661003969 (8)
JMFF034L06Sequence521000051 (9)ref|XP_009803761.1|4e-75PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nicotiana syl666003969 (8)
JMFF037A24Sequence627000051 (9)ref|XP_009620765.1|8e-101PREDICTED: uncharacterized protein At3g15000, mitochondrial isoform X4 [Nicotia650003969 (8)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF037A24+ GATCATATGGTACAGCTTGCCCATTTAT
                      ____________________________________________________________
consensus GATCATATGGTACAGCTTGCCCATTTAT
 
. : . : . : . : . : . :
JMFF026A13+ ACATCCAAATAAGAATCTGGGAGCACCCA
JMFF037A24+ AAATGGCTCTCCTCCATAGTCCTTGTTTTTAACATCCAAATAAGAATCTGGGAGCACCCA
                      ____________________________________________________________
consensus AAATGGCTCTCCTCCATAGTCCTTGTTTTTAACATCCAAATAAGAATCTGGGAGCACCCA
 
. : . : . : . : . : . :
JMFF026A13+ CCGAACTCCTTTTAATTCTTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
JMFF006P09+ AATTCTTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
JMFF003O11+ AATTCTTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
JMFF037A24+ CCGAACTCCTTTTAATTCTTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
JMFF019I06+ ATTCTTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
JMFF014B05+ TTCTTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
JMFF034L06+ TTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
JMFF029K03+ TTCTTTCAATTGGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
JMFF011B24+ ATTCTTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
                      ____________________________________________________________
consensus CCGAACTCCTTTTAATTCTTTCAATTTGTAAGAGAGTTCCTCTGACACAAGAGCCCCAAA
 
. : . : . : . : . : . :
JMFF026A13+ TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
JMFF006P09+ TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
JMFF003O11+ TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
JMFF037A24+ TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
JMFF019I06+ TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
JMFF014B05+ TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
JMFF034L06+ TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
JMFF029K03+ TGCATAATAATGCCCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
JMFF011B24+ TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
                      ____________________________________________________________
consensus TGCATAATAATG-CCTGGTTGAGACAGAGTAGATCTTCATCCTAGCCTCTTCCTCGCTTC
 
. : . : . : . : . : . :
JMFF026A13+ CAACCACCTGAGCTGAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
JMFF006P09+ CAACCACCTGAGCTAAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
JMFF003O11+ CAACCACCTGAGCTGAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
JMFF037A24+ CAACCACCTGAGCTAAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
JMFF019I06+ CAACCACCTGAGCTAAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
JMFF014B05+ CAACCACCTGAGCTAAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
JMFF034L06+ CAACCACCTGAGCTAAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
JMFF029K03+ CAACCACCTGAGCTAAGGTTTTGATNTAACTATCAATAATCTCATCTCTTGTCGGATCGC
JMFF011B24+ CAACCACCTGAGCTAAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
                      ____________________________________________________________
consensus CAACCACCTGAGCTAAGGTTTTGATGTAACTATCAATAATCTCATCTCTTGTCGGATCGC
 
. : . : . : . : . : . :
JMFF026A13+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
JMFF006P09+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
JMFF003O11+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
JMFF037A24+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
JMFF019I06+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
JMFF014B05+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
JMFF034L06+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
JMFF029K03+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
JMFF011B24+ CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
                      ____________________________________________________________
consensus CCTCCGGCTTCTCCATCACAATGAGCCAATGCTCGAAATCACAGCCGTCGAGCAATATAG
 
. : . : . : . : . : . :
JMFF026A13+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
JMFF006P09+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
JMFF003O11+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
JMFF037A24+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
JMFF019I06+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
JMFF014B05+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
JMFF034L06+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
JMFF029K03+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
JMFF011B24+ TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
                      ____________________________________________________________
consensus TCTCTTTCGGGGGACGATTGGACCAGTTAGGATTGGGATCATTGAGGGATGAGGAGGTCT
 
. : . : . : . : . : . :
JMFF026A13+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
JMFF006P09+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
JMFF003O11+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
JMFF037A24+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
JMFF019I06+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
JMFF014B05+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
JMFF034L06+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
JMFF029K03+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
JMFF011B24+ GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
                      ____________________________________________________________
consensus GGCGAGTCGCCAGTCCCCTTACTGCAGTGTACGCGGCTGGATAGAGTTGACAGACGGCGG
 
. : . : . : . : . : . :
JMFF026A13+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
JMFF006P09+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
JMFF003O11+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
JMFF037A24+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
JMFF019I06+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
JMFF014B05+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
JMFF034L06+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
JMFF029K03+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
JMFF011B24+ GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
                      ____________________________________________________________
consensus GGGAGACTGACACGAGCGGGCGGAGGCGGAAGGAGGAGAAAGCGAGAAAGTTGCGTGGCG
 
. : . : . : . : . : . :
JMFF026A13+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
JMFF006P09+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
JMFF003O11+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
JMFF037A24+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
JMFF019I06+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
JMFF014B05+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
JMFF034L06+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
JMFF029K03+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
JMFF011B24+ GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
                      ____________________________________________________________
consensus GAGTAAGAGAGGAATACGAGCGAAAGAGCTGCTTTCCGGCGGTGATGAGAGAACGAGATA
 
. : . : . : . : . : . :
JMFF026A13+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGAT
JMFF006P09+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGATAG
JMFF003O11+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGAT
JMFF037A24+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGATAG
JMFF019I06+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGATA
JMFF014B05+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGATA
JMFF034L06+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGATAG
JMFF029K03+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGA
JMFF011B24+ ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGATAG
                      ____________________________________________________________
consensus ACAAGGTCGCCATACCTGCAACTAGGGTTTATGGTACTCTCTTAAAACCTTCGAAGATAG