Contig 000050:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010P03Sequence552000050 (4)ref|XP_011077093.1|4e-29PREDICTED: beta-hexosaminidase 3 [Sesamum indicum] ref|XP_011077094.1| PREDICTED710005562 (9)emb|CBI18622.3|1e-100unnamed protein product [Vitis vinifera]
JMFF017I14Sequence566000050 (4)ref|XP_011077093.1|3e-31PREDICTED: beta-hexosaminidase 3 [Sesamum indicum] ref|XP_011077094.1| PREDICTED779005562 (9)ref|XP_010496066.1|4e-86PREDICTED: beta-hexosaminidase 3 [Camelina sativa]
JMFF032P15Sequence553000050 (4)ref|XP_011077093.1|2e-38PREDICTED: beta-hexosaminidase 3 [Sesamum indicum] ref|XP_011077094.1| PREDICTED778005562 (9)ref|XP_002265945.3|8e-118PREDICTED: beta-hexosaminidase 3-like, partial [Vitis vinifera]
JMFF039L04Sequence564000050 (4)ref|XP_011077093.1|4e-31PREDICTED: beta-hexosaminidase 3 [Sesamum indicum] ref|XP_011077094.1| PREDICTED780005562 (9)ref|XP_002265945.3|2e-117PREDICTED: beta-hexosaminidase 3-like, partial [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF017I14+ AACCCGTGCAAGGCTCCGTAAACTGTT
JMFF032P15+ GCTCCGTAAACTGTT
JMFF039L04+ CCCGTGCAAGGCTCCGTAAACTGTT
JMFF010P03+ TCCGTAAACTGTT
                      ____________________________________________________________
consensus AACCCGTGCAAGGCTCCGTAAACTGTT
 
. : . : . : . : . : . :
JMFF017I14+ TGTGCCCTGAGATATGCATATAGCGAACTTCCAATATTCGGGTACAGTCAAGTGGTAGGA
JMFF032P15+ TGTGCCCTGAGATATGCATATAGCGAACTTCCAATA-TCGGGTACAGTCAAGTGGTAGGA
JMFF039L04+ TGTGCCCTGAGATATGCATATAGCGAACTTCCAATA-TCGGGTACAGTCAAGTGGTAGGA
JMFF010P03+ TGTGCCNTGAGATATGCATATAGCGAACTTCCAATA-TCGGGTACAGTCAAGTGGTAGGA
                      ____________________________________________________________
consensus TGTGCCCTGAGATATGCATATAGCGAACTTCCAATA-TCGGGTACAGTCAAGTGGTAGGA
 
. : . : . : . : . : . :
JMFF017I14+ CTCGTCGATGCCATGCTGCAGCTCATCACTGGCTGAAAGAACAACCACAT-GGATCCCCT
JMFF032P15+ CTCGTCGATGCCATGCTGCAGCTCATCACTGGCTGAAAGAACAACCACAT-GGATCCCCT
JMFF039L04+ CTCGTCGATGCCATGCTGCAGCTCATCACTGGCTGAAAGAACAACCACATGGGATCCCCT
JMFF010P03+ CTCGTCGATGCCATGCTGCAGCTCATCACTGGCTGAAAGAACAACCACATGGGATCCCCT
                      ____________________________________________________________
consensus CTCGTCGATGCCATGCTGCAGCTCATCACTGGCTGAAAGAACAACCACATGGGATCCCCT
 
. : . : . : . : . : . :
JMFF017I14+ TAAGGACGTGAGACTGGTTAAAACCAGCAACACTGCCATTAACAGCATGGGTTCCTCTGA
JMFF032P15+ TAAGGACGTGAGACTGGTTAAAACCAGCAACACTGCCATTAACAGCATGGGTTCCTCTGA
JMFF039L04+ TAAGGACGTGAGACTGGTTAAAACCAGCAACACTGCCATTAACAGCATGGGTTCCTCTGA
JMFF010P03+ TAAGGACGTGAGACTGGTTAAAACCAGCAACACTGCCATTAACAGCATGGGTTCCTCTGA
                      ____________________________________________________________
consensus TAAGGACGTGAGACTGGTTAAAACCAGCAACACTGCCATTAACAGCATGGGTTCCTCTGA
 
. : . : . : . : . : . :
JMFF017I14+ TAACCTCAAGTATCCTAGAGAATCCATCCTTGAGAACCCCAGAACCATCCAAATAGGTGC
JMFF032P15+ TAACCTCAAGTATCCTAGAGAATCCATCCTTGAGAACCCCAGAACCATCCAAATAGGTGC
JMFF039L04+ TAACCTCAAGTATCCTAGAGAATCCATCCTTGAGAACCCCAGAACCATCCAAATAGGTGC
JMFF010P03+ TAACCTCAAGTATCCTAGAGAATCCATCCTTGAGAACCCCAGAACCATCCAAATAGGTGC
                      ____________________________________________________________
consensus TAACCTCAAGTATCCTAGAGAATCCATCCTTGAGAACCCCAGAACCATCCAAATAGGTGC
 
. : . : . : . : . : . :
JMFF017I14+ TCCCATTAGTCTTGAGCTCAAACCCATCGCTCAAATACAGTCTATGGTGGCCATGGCTCA
JMFF032P15+ TCCCATTAGTCTTGAGCTCAAACCCATCGCTCAAATACAGTCTATGGTGGCCATGGCTCA
JMFF039L04+ TCCCATTAGTCTTGAGCTCAAACCCATCGCTCAAATACAGTCTATGGTGGCCATGGCTCA
JMFF010P03+ TCCCATTAGTCTTGAGCTCAAACCCATCGCTCAAATACAGTCTATGGTGGCCATGGCTCA
                      ____________________________________________________________
consensus TCCCATTAGTCTTGAGCTCAAACCCATCGCTCAAATACAGTCTATGGTGGCCATGGCTCA
 
. : . : . : . : . : . :
JMFF017I14+ CATATTTGGGCATGGGCCATATATTCAATCGCTCATTGGCACCACCAGAAGCAGCAGCAG
JMFF032P15+ CATATTTGGGCATGGGCCATATATTCAATCGCTCATTGGCACCACCAGAAGCAGCAGCAG
JMFF039L04+ CATATTTGGGCATGGGCCATATATTCAATCGCTCATTGGCACCACCAGAAGCAGCAGCAG
JMFF010P03+ CATATTTGGGCATGGGCCATATATTCAATCGCTCATTGGCACCACCAGAAGCAGCAGCAG
                      ____________________________________________________________
consensus CATATTTGGGCATGGGCCATATATTCAATCGCTCATTGGCACCACCAGAAGCAGCAGCAG
 
. : . : . : . : . : . :
JMFF017I14+ CTGATACCACAATCAAACAAAACCCAATCGCCCAAAACCCAGCCTTGCCCAGTAAATCAG
JMFF032P15+ CTGATACCACAATCAAACAAAACCCAATCGCCCAAAACCCAGCCTTGCCCAGTAAATCAG
JMFF039L04+ CTGATACCACAATCAAACAAAACCCAATCGCCCAAAACCCAGCCTTGCCCAGTAAATCAG
JMFF010P03+ CTGATACCACAATCAAACAAAACCCAATCGCCCAAAACCCAGCCTTGCCCAGTAAATCAG
                      ____________________________________________________________
consensus CTGATACCACAATCAAACAAAACCCAATCGCCCAAAACCCAGCCTTGCCCAGTAAATCAG
 
. : . : . : . : . : . :
JMFF017I14+ CAGCGACCACCATCATGTATTCTACAAACAAATCAAACCACACAATAAAGATTCAATTTT
JMFF032P15+ CAGCGACCACCATCATGTATTCTACAAACAAATCAAACCACACAATAAAGATTCAATTTT
JMFF039L04+ CAGCGACCACCATCATGTATTCTACAAACAAATCAAACCACACAATAAAGATTCAATTTT
JMFF010P03+ CAGCGACCACCATCATGTATTCTACAAACAAATCAAACCACACAATAAAGATTCAATTTT
                      ____________________________________________________________
consensus CAGCGACCACCATCATGTATTCTACAAACAAATCAAACCACACAATAAAGATTCAATTTT
 
. : . : . : . : . : . :
JMFF017I14+ TACACAATTTTAACAGTGCCCTTTTCATGGCACCCAAGAAAAAATGCTTCCTAAAACAGC
JMFF032P15+ TACACAATTTTAACAGTGCCCTTTTCATGGCACCCAAGAAAAAATGCTTCCTAAAACAGC
JMFF039L04+ TACACAATTTTAACAGTGCCCTTTTCATGGCACCCAAGAAAAAATGCTTCCTAAAACAGC
JMFF010P03+ TACACAATTTTAACAGTGCCCTTTTCATGGCACCCAAGAAAAAATGCTTCCTAAAACAGC
                      ____________________________________________________________
consensus TACACAATTTTAACAGTGCCCTTTTCATGGCACCCAAGAAAAAATGCTTCCTAAAACAGC