clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF010P03 | Sequence | 552 | 000050 (4) | ref|XP_011077093.1| | 4e-29 | PREDICTED: beta-hexosaminidase 3 [Sesamum indicum] ref|XP_011077094.1| PREDICTED | 710 | 005562 (9) | emb|CBI18622.3| | 1e-100 | unnamed protein product [Vitis vinifera] |
JMFF017I14 | Sequence | 566 | 000050 (4) | ref|XP_011077093.1| | 3e-31 | PREDICTED: beta-hexosaminidase 3 [Sesamum indicum] ref|XP_011077094.1| PREDICTED | 779 | 005562 (9) | ref|XP_010496066.1| | 4e-86 | PREDICTED: beta-hexosaminidase 3 [Camelina sativa] |
JMFF032P15 | Sequence | 553 | 000050 (4) | ref|XP_011077093.1| | 2e-38 | PREDICTED: beta-hexosaminidase 3 [Sesamum indicum] ref|XP_011077094.1| PREDICTED | 778 | 005562 (9) | ref|XP_002265945.3| | 8e-118 | PREDICTED: beta-hexosaminidase 3-like, partial [Vitis vinifera] |
JMFF039L04 | Sequence | 564 | 000050 (4) | ref|XP_011077093.1| | 4e-31 | PREDICTED: beta-hexosaminidase 3 [Sesamum indicum] ref|XP_011077094.1| PREDICTED | 780 | 005562 (9) | ref|XP_002265945.3| | 2e-117 | PREDICTED: beta-hexosaminidase 3-like, partial [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMFF017I14+ AACCCGTGCAAGGCTCCGTAAACTGTT
JMFF032P15+ GCTCCGTAAACTGTT
JMFF039L04+ CCCGTGCAAGGCTCCGTAAACTGTT
JMFF010P03+ TCCGTAAACTGTT
____________________________________________________________
consensus AACCCGTGCAAGGCTCCGTAAACTGTT
. : . : . : . : . : . :
JMFF017I14+ TGTGCCCTGAGATATGCATATAGCGAACTTCCAATATTCGGGTACAGTCAAGTGGTAGGA
JMFF032P15+ TGTGCCCTGAGATATGCATATAGCGAACTTCCAATA-TCGGGTACAGTCAAGTGGTAGGA
JMFF039L04+ TGTGCCCTGAGATATGCATATAGCGAACTTCCAATA-TCGGGTACAGTCAAGTGGTAGGA
JMFF010P03+ TGTGCCNTGAGATATGCATATAGCGAACTTCCAATA-TCGGGTACAGTCAAGTGGTAGGA
____________________________________________________________
consensus TGTGCCCTGAGATATGCATATAGCGAACTTCCAATA-TCGGGTACAGTCAAGTGGTAGGA
. : . : . : . : . : . :
JMFF017I14+ CTCGTCGATGCCATGCTGCAGCTCATCACTGGCTGAAAGAACAACCACAT-GGATCCCCT
JMFF032P15+ CTCGTCGATGCCATGCTGCAGCTCATCACTGGCTGAAAGAACAACCACAT-GGATCCCCT
JMFF039L04+ CTCGTCGATGCCATGCTGCAGCTCATCACTGGCTGAAAGAACAACCACATGGGATCCCCT
JMFF010P03+ CTCGTCGATGCCATGCTGCAGCTCATCACTGGCTGAAAGAACAACCACATGGGATCCCCT
____________________________________________________________
consensus CTCGTCGATGCCATGCTGCAGCTCATCACTGGCTGAAAGAACAACCACATGGGATCCCCT
. : . : . : . : . : . :
JMFF017I14+ TAAGGACGTGAGACTGGTTAAAACCAGCAACACTGCCATTAACAGCATGGGTTCCTCTGA
JMFF032P15+ TAAGGACGTGAGACTGGTTAAAACCAGCAACACTGCCATTAACAGCATGGGTTCCTCTGA
JMFF039L04+ TAAGGACGTGAGACTGGTTAAAACCAGCAACACTGCCATTAACAGCATGGGTTCCTCTGA
JMFF010P03+ TAAGGACGTGAGACTGGTTAAAACCAGCAACACTGCCATTAACAGCATGGGTTCCTCTGA
____________________________________________________________
consensus TAAGGACGTGAGACTGGTTAAAACCAGCAACACTGCCATTAACAGCATGGGTTCCTCTGA
. : . : . : . : . : . :
JMFF017I14+ TAACCTCAAGTATCCTAGAGAATCCATCCTTGAGAACCCCAGAACCATCCAAATAGGTGC
JMFF032P15+ TAACCTCAAGTATCCTAGAGAATCCATCCTTGAGAACCCCAGAACCATCCAAATAGGTGC
JMFF039L04+ TAACCTCAAGTATCCTAGAGAATCCATCCTTGAGAACCCCAGAACCATCCAAATAGGTGC
JMFF010P03+ TAACCTCAAGTATCCTAGAGAATCCATCCTTGAGAACCCCAGAACCATCCAAATAGGTGC
____________________________________________________________
consensus TAACCTCAAGTATCCTAGAGAATCCATCCTTGAGAACCCCAGAACCATCCAAATAGGTGC
. : . : . : . : . : . :
JMFF017I14+ TCCCATTAGTCTTGAGCTCAAACCCATCGCTCAAATACAGTCTATGGTGGCCATGGCTCA
JMFF032P15+ TCCCATTAGTCTTGAGCTCAAACCCATCGCTCAAATACAGTCTATGGTGGCCATGGCTCA
JMFF039L04+ TCCCATTAGTCTTGAGCTCAAACCCATCGCTCAAATACAGTCTATGGTGGCCATGGCTCA
JMFF010P03+ TCCCATTAGTCTTGAGCTCAAACCCATCGCTCAAATACAGTCTATGGTGGCCATGGCTCA
____________________________________________________________
consensus TCCCATTAGTCTTGAGCTCAAACCCATCGCTCAAATACAGTCTATGGTGGCCATGGCTCA
. : . : . : . : . : . :
JMFF017I14+ CATATTTGGGCATGGGCCATATATTCAATCGCTCATTGGCACCACCAGAAGCAGCAGCAG
JMFF032P15+ CATATTTGGGCATGGGCCATATATTCAATCGCTCATTGGCACCACCAGAAGCAGCAGCAG
JMFF039L04+ CATATTTGGGCATGGGCCATATATTCAATCGCTCATTGGCACCACCAGAAGCAGCAGCAG
JMFF010P03+ CATATTTGGGCATGGGCCATATATTCAATCGCTCATTGGCACCACCAGAAGCAGCAGCAG
____________________________________________________________
consensus CATATTTGGGCATGGGCCATATATTCAATCGCTCATTGGCACCACCAGAAGCAGCAGCAG
. : . : . : . : . : . :
JMFF017I14+ CTGATACCACAATCAAACAAAACCCAATCGCCCAAAACCCAGCCTTGCCCAGTAAATCAG
JMFF032P15+ CTGATACCACAATCAAACAAAACCCAATCGCCCAAAACCCAGCCTTGCCCAGTAAATCAG
JMFF039L04+ CTGATACCACAATCAAACAAAACCCAATCGCCCAAAACCCAGCCTTGCCCAGTAAATCAG
JMFF010P03+ CTGATACCACAATCAAACAAAACCCAATCGCCCAAAACCCAGCCTTGCCCAGTAAATCAG
____________________________________________________________
consensus CTGATACCACAATCAAACAAAACCCAATCGCCCAAAACCCAGCCTTGCCCAGTAAATCAG
. : . : . : . : . : . :
JMFF017I14+ CAGCGACCACCATCATGTATTCTACAAACAAATCAAACCACACAATAAAGATTCAATTTT
JMFF032P15+ CAGCGACCACCATCATGTATTCTACAAACAAATCAAACCACACAATAAAGATTCAATTTT
JMFF039L04+ CAGCGACCACCATCATGTATTCTACAAACAAATCAAACCACACAATAAAGATTCAATTTT
JMFF010P03+ CAGCGACCACCATCATGTATTCTACAAACAAATCAAACCACACAATAAAGATTCAATTTT
____________________________________________________________
consensus CAGCGACCACCATCATGTATTCTACAAACAAATCAAACCACACAATAAAGATTCAATTTT
. : . : . : . : . : . :
JMFF017I14+ TACACAATTTTAACAGTGCCCTTTTCATGGCACCCAAGAAAAAATGCTTCCTAAAACAGC
JMFF032P15+ TACACAATTTTAACAGTGCCCTTTTCATGGCACCCAAGAAAAAATGCTTCCTAAAACAGC
JMFF039L04+ TACACAATTTTAACAGTGCCCTTTTCATGGCACCCAAGAAAAAATGCTTCCTAAAACAGC
JMFF010P03+ TACACAATTTTAACAGTGCCCTTTTCATGGCACCCAAGAAAAAATGCTTCCTAAAACAGC
____________________________________________________________
consensus TACACAATTTTAACAGTGCCCTTTTCATGGCACCCAAGAAAAAATGCTTCCTAAAACAGC