Contig 000044:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005J13Sequence395000044 (4)gb|KJB72092.1|2e-13hypothetical protein B456_011G158300 [Gossypium raimondii]772008165 (3)ref|XP_010326838.1|5e-121PREDICTED: receptor like protein kinase S.2 [Solanum lycopersicum]
JMFF009L06Sequence533000044 (4)ref|XP_009801784.1|2e-42PREDICTED: receptor like protein kinase S.2 [Nicotiana sylvestris]719008165 (3)ref|XP_010326838.1|1e-106PREDICTED: receptor like protein kinase S.2 [Solanum lycopersicum]
JMFS149F02Sequence606000044 (4)ref|XP_006420905.1|1e-66hypothetical protein CICLE_v10004317mg [Citrus clementina] gb|ESR34145.1| hypoth
JMSF037C22Sequence460000044 (4)emb|CDO99461.1|5e-29unnamed protein product [Coffea canephora]633008165 (3)ref|XP_010326838.1|2e-93PREDICTED: receptor like protein kinase S.2 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS149F02+ CGTGAACGCACCACCCCCGGAGCCGGACAAGATT
                      ____________________________________________________________
consensus CGTGAACGCACCACCCCCGGAGCCGGACAAGATT
 
. : . : . : . : . : . :
JMFS149F02+ CCGGTGACGGAGATGAGCCACGGCCACCAGCTCCGCCGCGAAAGTCTTCTCAAACCGCTC
                      ____________________________________________________________
consensus CCGGTGACGGAGATGAGCCACGGCCACCAGCTCCGCCGCGAAAGTCTTCTCAAACCGCTC
 
. : . : . : . : . : . :
JMFS149F02+ CCCTCTCTCCGCCAGGCACTTCACCGCCACCACCGTGCCATCACTAGGCAAAACCGCGCG
JMSF037C22+ AACCGCGCG
JMFF009L06+ TCCGCCAGGCACTTCACCGCCACCACCGTGCCATCACTAGGCAAAACCGCGCG
                      ____________________________________________________________
consensus CCCTCTCTCCGCCAGGCACTTCACCGCCACCACCGTGCCATCACTAGGCAAAACCGCGCG
 
. : . : . : . : . : . :
JMFS149F02+ GTATACCTTCCCGAATCCCCCGCTGCCCAAGATTTCACTCTCGCTAAAACCATTAGACCC
JMSF037C22+ GTATACCTTCCCGAATCCCCCGNTGCCCAAGATTTCACTCTCGNTNAAACCATTAGACCC
JMFF009L06+ GTATACCTTCCCGAATCCCCCGCTGCCCAAGATTTCACTCTCGCTAAAACCATTAGACCC
                      ____________________________________________________________
consensus GTATACCTTCCCGAATCCCCCGCTGCCCAAGATTTCACTCTCGCTAAAACCATTAGACCC
 
. : . : . : . : . : . :
JMFS149F02+ GACAAAGAGCTCGGAATAACTAAAAATCCTCGGATTATCACTCCCTACTTTATTCTCCTC
JMSF037C22+ GACAAAGAGCTCGGAATAANTAAAAATCCTNGGATTATCACTCCCTACTTTATTNTCCTC
JMFF005J13+ ATCCTCGGATTATCACTCCCTACTTTATTCTCCTC
JMFF009L06+ GACAAAGAGCTCGGAATAACTAAAAATCCTCGGATTATCACTCCCTACTTTATTCTCCTC
                      ____________________________________________________________
consensus GACAAAGAGCTCGGAATAACTAAAAATCCTCGGATTATCACTCCCTACTTTATTCTCCTC
 
. : . : . : . : . : . :
JMFS149F02+ CCCCATCTGAACACCCTCCGTGTCGTGAAACTGCCCGGAAAACTGCTTCTTCTTCCCGGC
JMSF037C22+ CCCCATNTGAACACCCTCCGTGTCGTGAAACTGCCCGGAAAACTGCTTCTTCTTCCCGGC
JMFF005J13+ CCCCATCTGAACACCCTCCGTGTCGTGAAACTGCCCGGAAAACTGCTTCTTCTTCCCGGC
JMFF009L06+ CCCCATCTGAACACCCTCCGTGTCGTGAAACTGCCCGGAAAACTGCTTCTTCTTCCCGGC
                      ____________________________________________________________
consensus CCCCATCTGAACACCCTCCGTGTCGTGAAACTGCCCGGAAAACTGCTTCTTCTTCCCGGC
 
. : . : . : . : . : . :
JMFS149F02+ GACCTCCGGGCTGCAAAAGCTAACCCACCCAGAACCCAAGAATCTGTGCAGCGATTCCTT
JMSF037C22+ GACCTCCGGGCTGCAAAAGCTAACCCACCCAGAACCCAAGAATCTGTGCAGCGATTCCTT
JMFF005J13+ GACCTCCGGGCTGCAAAAGCTAACCCACCCAGAACCCAAGAATCTGTGCAGCGATTCCTT
JMFF009L06+ GACCTCCGGGCTGCAAAAGCTAACCCACCCAGAACCCAAGAATCTGTGCAGCGATTCCTT
                      ____________________________________________________________
consensus GACCTCCGGGCTGCAAAAGCTAACCCACCCAGAACCCAAGAATCTGTGCAGCGATTCCTT
 
. : . : . : . : . : . :
JMFS149F02+ GACAAATTCAACAACATGCCCCCCGCATCGCCGGTGCCGCGTTCCACCAACTCCAACCCC
JMSF037C22+ GACAAATTCAACAACATNCCCCCCGCATCGCCGGTGCCGCGTTCCACCAACTCCAACCCN
JMFF005J13+ GACAAATTCAACAACATGCCCCCCGCATCGCCGGTGCCGCGTTCCACCAACTCCAACCCC
JMFF009L06+ GACAAATTCAACAACATGCCCCCCGCATCGCCGGTGCCGCGTTCCACCAACTCCAACCCC
                      ____________________________________________________________
consensus GACAAATTCAACAACATGCCCCCCGCATCGCCGGTGCCGCGTTCCACCAACTCCAACCCC
 
. : . : . : . : . : . :
JMFS149F02+ TTTTTCCGGCGCCGGCGCGGTTTCATCGTCATCTGGGAAGACGAAACAGAGGCGTTTGAT
JMSF037C22+ TTTTTCCGGCGCCGGCGCGGTTTCATCGTCATNTGGGAAGACGAAACAGAGGCGTNTGAT
JMFF005J13+ TTTTTCCGGCGCCGGCGCGGTTTCATCGTCATCTGGGAAGACGAAACAGAGGCGTTTGAT
JMFF009L06+ TTTTTCCGGCGCCGGCGCGGTTTCATCGTCATCTGGGAAGACGAAACAGAGGCGTTTGAT
                      ____________________________________________________________
consensus TTTTTCCGGCGCCGGCGCGGTTTCATCGTCATCTGGGAAGACGAAACAGAGGCGTTTGAT
 
. : . : . : . : . : . :
JMFS149F02+ GTGCATCTTGGCGAGGTGTATGGAGTCTGTGAAGAAGAATTGATATCAATGGTGTGAAAT
JMSF037C22+ GTGCATCTTGGCGAGGTGTATGGAGTCTGTGAAGAAGAATTGATATCAATGGTGTGAAAT
JMFF005J13+ GTGCATCTTGGCGAGGTGTATGGAGTCTGTGAAGAAGAATTGATATCAATGGTGTGAAAT
JMFF009L06+ GTGCATCTTGGCGAGGTGTATGGAGTCTGTGAAGAAGAATTGATATCAATGGTGTGAAAT
                      ____________________________________________________________
consensus GTGCATCTTGGCGAGGTGTATGGAGTCTGTGAAGAAGAATTGATATCAATGGTGTGAAAT
 
. : . : . : . : . : . :
JMFS149F02+ GGAAGTAGAAGAATGGGATGAGGAAAGG
JMSF037C22+ GGAAGTAGAAGAATGGGATGNGGAAAGG
JMFF005J13+ GGAAGTAGAAGAATGGGATGAGGAAAGGGTGAGTTTCATGATGGATAATTATGAATTTAT
JMFF009L06+ GGAAGTAGAAGAATGGGATGAGGAAAGGGTGAGTTTCATGATGGATAATTATGAATTTAT
                      ____________________________________________________________
consensus GGAAGTAGAAGAATGGGATGAGGAAAGGGTGAGTTTCATGATGGATAATTATGAATTTAT