| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009K17 | Sequence | 551 | 000043 (4) | ref|XP_009616415.1| | 2e-78 | PREDICTED: V-type proton ATPase subunit d2 [Nicotiana tomentosiformis] ref|XP_00 | 721 | 012285 (4) | gb|KDO72501.1| | 1e-99 | hypothetical protein CISIN_1g018459mg [Citrus sinensis] |
| JMFF018F06 | Sequence | 640 | 000043 (4) | ref|XP_009616415.1| | 5e-118 | PREDICTED: V-type proton ATPase subunit d2 [Nicotiana tomentosiformis] ref|XP_00 | 791 | 012285 (4) | gb|KJB33309.1| | 1e-87 | hypothetical protein B456_006G025300 [Gossypium raimondii] |
| JMFS122C12 | Sequence | 577 | 000043 (4) | ref|XP_009765131.1| | 4e-103 | PREDICTED: V-type proton ATPase subunit d2 [Nicotiana sylvestris] ref|XP_0097651 | |||||
| JMSF033J06 | Sequence | 678 | 000043 (4) | ref|XP_009765131.1| | 6e-120 | PREDICTED: V-type proton ATPase subunit d2 [Nicotiana sylvestris] ref|XP_0097651 | 782 | 012285 (4) | gb|KDO72501.1| | 2e-124 | hypothetical protein CISIN_1g018459mg [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
JMFF018F06+ TGAAGTAATGCACTCAGAGAAATATGGAGCCAAGGGGGTA
JMSF033J06+ GTCATCCAAGTCCTCTGAAGTAATGCACTCAGAGAAATATGGAGCCAAGGGGGTA
____________________________________________________________
consensus GTCATCCAAGTCCTCTGAAGTAATGCACTCAGAGAAATATGGAGCCAAGGGGGTA
. : . : . : . : . : . :
JMFS122C12+ CTGTAAAGCTCCCTCATATTTTGAGCCACTGCTAAGGAGGCAATG
JMFF018F06+ TCAACAAGCACAAGCCTGTAAAGCTCCCTCATATTTTGAGCCACTGCTAAGGAGGCAATG
JMSF033J06+ TCAACAAGCACAAGCCTGTAAAGCTCCCTCATATTTTGAGCCACTGCTAAGGAGGCAATG
____________________________________________________________
consensus TCAACAAGCACAAGCCTGTAAAGCTCCCTCATATTTTGAGCCACTGCTAAGGAGGCAATG
. : . : . : . : . : . :
JMFS122C12+ CTGTCAAACATGCCCAAAGGGTGGCATTTCTCCAACAATTCCTGAACATCTCTCTCATGC
JMFF018F06+ CTGTCAAACATGCCCAAAGGGTGGCATTTCTCCAACAATTCCTGAACATCTCTCTCATGC
JMSF033J06+ CTGTCAAACATGCCCAAAGGGTGGCATTTCTCCAACAATTCCTGAACATCTCTCTCATGC
JMFF009K17+ CTCTCTCATGC
____________________________________________________________
consensus CTGTCAAACATGCCCAAAGGGTGGCATTTCTCCAACAATTCCTGAACATCTCTCTCATGC
. : . : . : . : . : . :
JMFS122C12+ AATGTTCCAGTAACAATTAGAACAACATTGTCAATCATGTGACCATACCTGATGTACTCC
JMFF018F06+ AATGTTCCAGTAACAATTAGAACAACATTGTCAATCATGTGACCATACCTGATGTACTCC
JMSF033J06+ AATGTTCCAGTAACAATTAGAACAACATTGTCAATCATGTGACCATACCTGATGTACTCC
JMFF009K17+ AATGTTCCAGTAACAATTAGAACAACATTGTCAATCATGTGACCATACCTGATGTACTCC
____________________________________________________________
consensus AATGTTCCAGTAACAATTAGAACAACATTGTCAATCATGTGACCATACCTGATGTACTCC
. : . : . : . : . : . :
JMFS122C12+ AAAAAGGTTGACAAGGGCTCTGTAGCTTGGCATAACATGTGGTTATACTCATCCACGAGT
JMFF018F06+ AAAAAGGTTGACAAGGGCTCTGTAGCTTGGCATAACATGTGGTTATACTCATCCACGAGT
JMSF033J06+ AAAAAGGTTGACAAGGGCTCTGTAGCTTGGCATAACATGTGGTTATACTCATCCACGAGT
JMFF009K17+ AAAAAGGTTGACAAGGGCTCTGTAGCTTGGCATAACATGTGGTTATACTCATCCACGAGT
____________________________________________________________
consensus AAAAAGGTTGACAAGGGCTCTGTAGCTTGGCATAACATGTGGTTATACTCATCCACGAGT
. : . : . : . : . : . :
JMFS122C12+ TTAAGAGTGCACTTCTCCACAATTGTAGTTGTGTGTAGAGGAGAAGGTTCATTCTGGAGG
JMFF018F06+ TTAAGAGTGCACTTCTCCACAATTGTAGTTGTGTGTAGAGGAGAAGGTTCATTCTGGAGG
JMSF033J06+ TTAAGAGTGCACTTCTCCACAATTGTAGTTGTGTGTAGAGGAGAAGGTTCATTCTGGAGG
JMFF009K17+ TTAAGAGTGCACTTCTCCACAATTGTAGTTGTGTGTAGAGGAGAAGGTTCATTCTGGAGG
____________________________________________________________
consensus TTAAGAGTGCACTTCTCCACAATTGTAGTTGTGTGTAGAGGAGAAGGTTCATTCTGGAGG
. : . : . : . : . : . :
JMFS122C12+ TACGGGCCGTATTCGGTGGCGGTGAGGTGCATCTTGATGTCATCGAGGGTTTCGCACTGG
JMFF018F06+ TACGGGCCGTATTCGGTGGCGGTGAGGTGCATCTTGATGTCATCGAGGGTTTCGCACTGG
JMSF033J06+ TACGGGCCGTATTCGGTGGCGGTGAGGTGCATCTTGATGTCATCGAGGGTTTCGCGCTGG
JMFF009K17+ TACGGGCCGTATTCGGTGGCGGTGAGGTGCATCTTGATGTCATCGAGGGTTTCGCACTGG
____________________________________________________________
consensus TACGGGCCGTATTCGGTGGCGGTGAGGTGCATCTTGATGTCATCGAGGGTTTCGCACTGG
. : . : . : . : . : . :
JMFS122C12+ CAGAGGTTGTTGTAATCGGCGGCGGTTAGGAGACCAGCTCGGTGGCCCCTCACGATCGCC
JMFF018F06+ CAGAGGTTGTTGTAATCGGCGGCGGTTAGGAGACCAGCTCGGTGGCCCCTCACGATCGCC
JMSF033J06+ CAGAGGTTGTTGTAATCGGCGGCGGTTAGGAGACCAGCTCGGTGGCCCCTCACGATCGCC
JMFF009K17+ CAGAGGTTGTTGTAATCGGCGGCGGTTAGGAGACCAGCTCGGTGGCCCCTCACGATCGCC
____________________________________________________________
consensus CAGAGGTTGTTGTAATCGGCGGCGGTTAGGAGACCAGCTCGGTGGCCCCTCACGATCGCC
. : . : . : . : . : . :
JMFS122C12+ TCCAGGTATCCACTGTGGATGTTGAAGGTGAGCGCTTCGAATCCGTACATCTTTTTTTCT
JMFF018F06+ TCCAGGTATCCACTGTGGATGTTGAAGGTGAGCGCTTCGAATCCGTACATCTTTTTTTCT
JMSF033J06+ TCCAGGTATCCACTGTGGATGTTGAAGGTGAGCGCTTCGAATCCGTACATCTTTTTTTCT
JMFF009K17+ TCCAGGTATCCACTGTGGATGTTGAAGGTGAGCGCTTCGAATCCGTACATCTTTTTTTCT
____________________________________________________________
consensus TCCAGGTATCCACTGTGGATGTTGAAGGTGAGCGCTTCGAATCCGTACATCTTTTTTTCT
. : . : . : . : . : . :
JMFS122C12+ CTCTCGGAGATCGTTATTGATTATAGATCTGAATCGAAATCGAGAGATTGAAAGAGATAA
JMFF018F06+ CTCTCGGAGATCGTTATTGATTATAGATCTGAATCGAAATCGAGAGATTGAAAGAGATAA
JMSF033J06+ CTCTCGGAGATCGTTATTGATTATAGATCTGAATCGAAATCGAGAGATTGAAAGAGATAA
JMFF009K17+ CTCTCGGAGATCGTTATTGATTATAGATCTGAATCGAAATCGAGAGATTGAAAGAGATAA
____________________________________________________________
consensus CTCTCGGAGATCGTTATTGATTATAGATCTGAATCGAAATCGAGAGATTGAAAGAGATAA
. : . : . : . : . : . :
JMFS122C12+ TAGAGACCCTTCGAGAAAACCCTTAACCGGTGCTCCAGAGAGGGAGGGGTGA
JMFF018F06+ TAGAGACCCTTCGAGAAAACCCTTAACCGGTGCTCCAGAGAGGGAGGGGTGACGGGTTCC
JMSF033J06+ TAGAGACCCTTCGAGAAAACCCTTAACCGGTGCTCCAGAGAGGGAGGGGTGACGGGTTCC
JMFF009K17+ TAGAGACCCTTCGAGAAAACCCTTAACCGGTGCTCCAGAGAGGGAGGGGTGACGGGTTCC
____________________________________________________________
consensus TAGAGACCCTTCGAGAAAACCCTTAACCGGTGCTCCAGAGAGGGAGGGGTGACGGGTTCC
. : . : . : . : . : . :
JMSF033J06+ GATCTTATGAGCGTGGGGTCC
JMFF009K17+ GATCTTATGAGCGTGGGGTCCTGAAACTCTATGCTGTAGATTTCGCAATAATAGTAAAAC
____________________________________________________________
consensus GATCTTATGAGCGTGGGGTCCTGAAACTCTATGCTGTAGATTTCGCAATAATAGTAAAAC