Contig 000039:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF042J01+                                                     AAGCTGATAGTTGGATTG
                      ____________________________________________________________
consensus                                                       AAGCTGATAGTTGGATTG
 
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JMFF048K05+                                                 CCTTAAGATGTTTCTCAGAGAC
JMFF042J01+           CACATTAATGGTTATATGCTAGAGAATTGAGACAAGAACCTTAAGATGTTTCTCAGAGAC
JMFF009E14+                                                           TTTCTCAGAGAC
                      ____________________________________________________________
consensus             CACATTAATGGTTATATGCTAGAGAATTGAGACAAGAACCTTAAGATGTTTCTCAGAGAC
 
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JMFF048K05+           ACCAGGAACATTAGTCTCCATGGAAGCTGTGTTTTCCTTAAAAGGGAAACTCAATGCAGG
JMFF042J01+           ACCAGGAACATTAGTCTCCATGGAAGCTGTGTTTTCCTT-AAAGGGAAACTCAATGCAGG
JMFF009E14+           ACCAGGAACATTAGTCTCCATGGAAGCTGTGTTTTCCTT-AAAGGGAAACTCAATGCAGG
                      ____________________________________________________________
consensus             ACCAGGAACATTAGTCTCCATGGAAGCTGTGTTTTCCTT-AAAGGGAAACTCAATGCAGG
 
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JMFF048K05+           GGAACTGGCAGTATCATCAAGATAACACCTTTCTTGTTTATCACCCCAAATCTCTGTACT
JMFF042J01+           GGAACTGGCAGTATCATCAAGATAACACCTTTCTTGTTTATCACCCCAAATCTCTGTACT
JMFF009E14+           GGAACTGGCAGTATCATCAAGATAACACCTTTCTTGTTTATCACCCCAAATCTCTGTACT
                      ____________________________________________________________
consensus             GGAACTGGCAGTATCATCAAGATAACACCTTTCTTGTTTATCACCCCAAATCTCTGTACT
 
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JMFF048K05+           TTTCCTTTTCTGCTTCCCTTTATACAAATATTCTTCTTCTTCTTCGCCACCGCGAAAATG
JMFF042J01+           TTTCCTTTTCTGCTTCCCTTTATACAAATATTCTTCTTCTTCTTCGCCACCGCGAAAATG
JMFF009E14+           TTTCCTTTTCTGCTTCCCTTTATACAAATATTCTTCTTCTTCTTCGCCACCGCGAAAATG
                      ____________________________________________________________
consensus             TTTCCTTTTCTGCTTCCCTTTATACAAATATTCTTCTTCTTCTTCGCCACCGCGAAAATG
 
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JMFF048K05+           TGGTGGCCCTGAGGATGCATCAGAGACCATAGACAAGTCCTCATCCTCACTGCAAAACCC
JMFF042J01+           TGGTGGCCCTGAGGATGCATCAGAGACCATAGACAAGTCCTCATCCTCACTGCAAAACCC
JMFF009E14+           TGGTGGCCCTGAGGATGCATCAGAGACCATAGACAAGTCCTCATCCTCACTGCAAAACCC
                      ____________________________________________________________
consensus             TGGTGGCCCTGAGGATGCATCAGAGACCATAGACAAGTCCTCATCCTCACTGCAAAACCC
 
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JMFF048K05+           CATCTTTCCCCCTCTATGATCTTCACCATGAAATCTGCTGTTGAATTGATCTTCAGAATT
JMFF042J01+           CATCTTTCCCCCTCTATGATCTTCACCATGAAATCTGCTGTTGAATTGATCTTCAGAATT
JMFF009E14+           CATCTTTCCCCCTCTATGATCTTCACCATGAAATCTGCTGTTGAATTGATCTTCAGAATT
                      ____________________________________________________________
consensus             CATCTTTCCCCCTCTATGATCTTCACCATGAAATCTGCTGTTGAATTGATCTTCAGAATT
 
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JMFF048K05+           TGAGTTCTGATCAAAGTAAGTTGTCCACCCAGATTGGCACCCAGAACTGCACTCAGAACC
JMFF042J01+           TGAGTTCTGATCAAAGTAAGTTGTCCACCCAGATTGGCACCCAGAACTGCACTCAGAACC
JMFF009E14+           TGAGTTCTGATCAAAGTAAGTTGTCCACCCAGATTGGCACCCAGAACTGCACTCAGAACC
                      ____________________________________________________________
consensus             TGAGTTCTGATCAAAGTAAGTTGTCCACCCAGATTGGCACCCAGAACTGCACTCAGAACC
 
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JMFF048K05+           TGATAGATTCATTCTTGAAAACTTTACTTTTTTTTCTTTACAAAACTCCCAGTTTTGGGT
JMFF042J01+           TGATAGATTCATTCTTGAAAACTTTACTTTTTTTTCTTTACAAAACTCCCAGTTTTGGGT
JMFF009E14+           TGATAGATTCATTCTTGAAAACTTTACTTTTTTTTCTTTACAAAACTCCCAGTTTTGGGT
                      ____________________________________________________________
consensus             TGATAGATTCATTCTTGAAAACTTTACTTTTTTTTCTTTACAAAACTCCCAGTTTTGGGT
 
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JMFF048K05+           GTGAAGAATGAGGGTAGGT                                         
JMFF042J01+           GTGAAGAATGAGGGTAGGTGGTGAAAAAAGGGATAAGTATGGGGGAGTATTTATAGGGAG
JMFF009E14+           GTGAAGAATGAGGGTAGGTGGTGAAAAAAGGGATAAGTATGGGGGAGTATTTATAGGGAG
                      ____________________________________________________________
consensus             GTGAAGAATGAGGGTAGGTGGTGAAAAAAGGGATAAGTATGGGGGAGTATTTATAGGGAG
 
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JMFF042J01+           GAAAAGGGAAGGTACAGAAAACCAGTGGCAGCATGCTCAAATCCTAGACTAGTTTT    
JMFF009E14+           GAAAAGGGAAGGTACAGAAAACCAGTGGCAGCATGCTCAAATCCTAGACTAGTTTTTGTT
                      ____________________________________________________________
consensus             GAAAAGGGAAGGTACAGAAAACCAGTGGCAGCATGCTCAAATCCTAGACTAGTTTTTGTT