Contig 000023:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006F04Sequence582000023 (2)ref|XP_009758945.1|2e-63PREDICTED: biotin carboxylase 1, chloroplastic [Nicotiana sylvestris]818005341 (2)gb|KHG05812.1|2e-131Biotin carboxylase 2, chloroplastic [Gossypium arboreum]
JMFF014P02Sequence255000023 (2)744005341 (2)gb|KHG05812.1|5e-107Biotin carboxylase 2, chloroplastic [Gossypium arboreum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006F04+                             TTACAGCAGCAGATAAGACATTTTGGATCAACAAGTACGATT
                      ____________________________________________________________
consensus                               TTACAGCAGCAGATAAGACATTTTGGATCAACAAGTACGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006F04+           GATTACTAGGAGCTTCACCAATGCAAACAGCCTCATCTGCAAGCTTCACATGAAGGGCAT
                      ____________________________________________________________
consensus             GATTACTAGGAGCTTCACCAATGCAAACAGCCTCATCTGCAAGCTTCACATGAAGGGCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006F04+           CTTTGTCTATGGTTGAGTAAACTGCAACACAAGGAATCCCCATTTCATGAGCAGTCCGAA
                      ____________________________________________________________
consensus             CTTTGTCTATGGTTGAGTAAACTGCAACACAAGGAATCCCCATTTCATGAGCAGTCCGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006F04+           TCACACGAACTGCAATTTCCCCTCTGTTTGCCACCAAGATTTTACCAGCCTGACATACTG
                      ____________________________________________________________
consensus             TCACACGAACTGCAATTTCCCCTCTGTTTGCCACCAAGATTTTACCAGCCTGACATACTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006F04+           CACCAAGAGCTCCACCATATTTGCTAGATTTAGGACTAACTCTAGATGCTTGAAGCCTCT
                      ____________________________________________________________
consensus             CACCAAGAGCTCCACCATATTTGCTAGATTTAGGACTAACTCTAGATGCTTGAAGCCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF014P02+                                                              TAATACTAG
JMFF006F04+           GTCGTGGAAAGTTTATCCTCTTTCCTACCGTAAAGCTACACTGAGAGCTACTAATACTAG
                      ____________________________________________________________
consensus             GTCGTGGAAAGTTTATCCTCTTTCCTACCGTAAAGCTACACTGAGAGCTACTAATACTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF014P02+           TTCTCCCAATGAGTAAACCTGGGCGAAAAGGCGAGGAGGAGATAGATTTGGTGCAAAAGN
JMFF006F04+           TTCTCCCAATGAGTAAACCTGGGCGAAAAGGCGAGGAGGAGATAGATTTGGTGCAAAAGC
                      ____________________________________________________________
consensus             TTCTCCCAATGAGTAAACCTGGGCGAAAAGGCGAGGAGGAGATAGATTTGGTGCAAAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF014P02+           TAGTCGCGGCGGCAGATTCCATTCTCTCTGATCACTGCGGAATGCGTGCACGCGAGAGTG
JMFF006F04+           TAGTCGCGGCGGCAGATTCCATTCTCTCTGATCACTGCGGAATGCGTGCACGCGAGAGTG
                      ____________________________________________________________
consensus             TAGTCGCGGCGGCAGATTCCATTCTCTCTGATCACTGCGGAATGCGTGCACGCGAGAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF014P02+           AGAGAGAAAGAGAGGGGAGAGGAGATTTGAAGGAAGGAGCTGTCGATGAATACGAGGGAG
JMFF006F04+           AGAGAGAAAGAGAGGGGAGAGGAGATTTGAAGGAAGGAGCTGTCGATGAATACGAGGGAG
                      ____________________________________________________________
consensus             AGAGAGAAAGAGAGGGGAGAGGAGATTTGAAGGAAGGAGCTGTCGATGAATACGAGGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF014P02+           CGGCGAGTTGAATACTCCGCCAGAGCTGTTGTGAGAGATATGACTACTAGCTGTGTAGTT
JMFF006F04+           CGGCGAGTTGAATACTCCGCCAGAGCTGTTGTGAGAGATATGACTACTAGCTGTGTAGTT
                      ____________________________________________________________
consensus             CGGCGAGTTGAATACTCCGCCAGAGCTGTTGTGAGAGATATGACTACTAGCTGTGTAGTT