Contig 000020:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005L08Sequence560000020 (2)ref|XP_009598341.1|224PREDICTED: uncharacterized protein LOC104094171 [Nicotiana tomentosiformis]730001458 (2)ref|XP_006352526.1|236PREDICTED: uncharacterized protein LOC102597876 [Solanum tuberosum]
JMSF042O03Sequence732000020 (2)ref|XP_009598341.1|306PREDICTED: uncharacterized protein LOC104094171 [Nicotiana tomentosiformis]673001458 (2)ref|XP_009598341.1|217PREDICTED: uncharacterized protein LOC104094171 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF042O03+                                                     ATCTTGCAGTCTGAGGAT
                      ____________________________________________________________
consensus                                                       ATCTTGCAGTCTGAGGAT
 
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JMSF042O03+           CTGGAGGTAGCAGATGAGACGGAATAGAACGCACACGAGGAAGAAGACCACCGTCCTGTA
                      ____________________________________________________________
consensus             CTGGAGGTAGCAGATGAGACGGAATAGAACGCACACGAGGAAGAAGACCACCGTCCTGTA
 
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JMSF042O03+           AAGCCAAGAGCACAGCTCCAGTGTGCAGGCAAAGACATCACTCACAACAGCATTGCCCAA
                      ____________________________________________________________
consensus             AAGCCAAGAGCACAGCTCCAGTGTGCAGGCAAAGACATCACTCACAACAGCATTGCCCAA
 
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JMSF042O03+           GAATGGGATTTGGGTCCCACCTGAGGTGTACCACCATATCTTGTATGCACTTTCAGCAGC
JMFF005L08+                                                   TTGTATGCACTTTCAGCAGC
                      ____________________________________________________________
consensus             GAATGGGATTTGGGTCCCACCTGAGGTGTACCACCATATCTTGTATGCACTTTCAGCAGC
 
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JMSF042O03+           AAGACAAGGCATGACAAAGATGAAAAGGATCCTTATTGATCTATTGAGCTGTTCAGTGTA
JMFF005L08+           AAGACAAGGCATGACAAAGATGAAAAGGATCCTTATTGATCTATTGAGCTGTTCAGTGTA
                      ____________________________________________________________
consensus             AAGACAAGGCATGACAAAGATGAAAAGGATCCTTATTGATCTATTGAGCTGTTCAGTGTA
 
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JMSF042O03+           GCATTTCCTGACCGCCTCGCTCTCGTCGCAGAGCTTATCGAAGAACAAGAACCTGCGGAG
JMFF005L08+           GCATTTCCTGACCGCCTCGCTCTCGTCGCAGAGCTTATCGAAGAACAAGAACCTGCGGAG
                      ____________________________________________________________
consensus             GCATTTCCTGACCGCCTCGCTCTCGTCGCAGAGCTTATCGAAGAACAAGAACCTGCGGAG
 
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JMSF042O03+           GCCGTATCTCCGGACGAAGCCGGAGAGGCAGACGAAGGAGAGGGCGGCGACGCCACTGAG
JMFF005L08+           GCCGTATCTCCGGACGAAGCCGGAGAGGCAGACGAAGGAGAGGGCGGCGACGCCACTGAG
                      ____________________________________________________________
consensus             GCCGTATCTCCGGACGAAGCCGGAGAGGCAGACGAAGGAGAGGGCGGCGACGCCACTGAG
 
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JMSF042O03+           AGAGAGCTGAACAATGGCGTCGTAGGGCCTACTGTGCTGGTTGTCGCAGCCGCTGCAGGC
JMFF005L08+           AGAGAGCTGAACAATGGCGTCGTAGGGCCTACTGTGCTGGTTGTCGCAGCCGCTGCAGGC
                      ____________________________________________________________
consensus             AGAGAGCTGAACAATGGCGTCGTAGGGCCTACTGTGCTGGTTGTCGCAGCCGCTGCAGGC
 
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JMSF042O03+           AAGGAAGAAGTGCGAGAAGCAAGGGACGCCGACGGTCATCACCAGGAAGACGGTCCACGA
JMFF005L08+           AAGGAAGAAGTGCGAGAAGCAAGGGACGCCGACGGTCATCACCAGGAAGACGGTCCACGA
                      ____________________________________________________________
consensus             AAGGAAGAAGTGCGAGAAGCAAGGGACGCCGACGGTCATCACCAGGAAGACGGTCCACGA
 
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JMSF042O03+           GAGCGCGGTGGAGCACCGGTCCGACTGATCCACGCACATCCATTTCAACCATGACCTGAA
JMFF005L08+           GAGCGCGGTGGAGCACCGGTCCGACTGATCCACGCACATCCATTTCAACCATGACCTGAA
                      ____________________________________________________________
consensus             GAGCGCGGTGGAGCACCGGTCCGACTGATCCACGCACATCCATTTCAACCATGACCTGAA
 
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JMSF042O03+           GCTATGCAGCTCGTCGAACGCGTGCGATTTGCTACGCCCAAGCGCCTTGTTGTTCTTCTT
JMFF005L08+           GCTATGCAGCTCGTCGAACGCGTGCGATTTGCTACGCCCAAGCGCCTTGTTGTTCTTCTT
                      ____________________________________________________________
consensus             GCTATGCAGCTCGTCGAACGCGTGCGATTTGCTACGCCCAAGCGCCTTGTTGTTCTTCTT
 
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JMSF042O03+           CTTCAGCAGCGCTTCCCCTTCATCCCCCATCTTTTTAGCCGCTACTTTTTCGCCGGAAAT
JMFF005L08+           CTTCAGCAGCGCTTCCCCTTCATCCCCCATCTTTTTAGCCGCTACTTTTTCGCCGGAAAT
                      ____________________________________________________________
consensus             CTTCAGCAGCGCTTCCCCTTCATCCCCCATCTTTTTAGCCGCTACTTTTTCGCCGGAAAT
 
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JMSF042O03+           CGAAGCGAGCGAGCGAGCGAGACGCAGAGAGATTGGCGGAGAACAGACC           
JMFF005L08+           CGAAGCGAGCGAGCGAGCGAGACGCAGAGAGATTGGCGGAGAACAGACCCCGCGGTTTGT
                      ____________________________________________________________
consensus             CGAAGCGAGCGAGCGAGCGAGACGCAGAGAGATTGGCGGAGAACAGACCCCGCGGTTTGT