Contig 000016:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004H05Sequence538000016 (2)emb|CDP19824.1|6e-57unnamed protein product [Coffea canephora]777009686 (2)ref|XP_011096472.1|3e-51PREDICTED: src substrate protein p85 [Sesamum indicum]
JMFF019M23Sequence488000016 (2)ref|XP_004232988.1|9e-85PREDICTED: intersectin-1 [Solanum lycopersicum]771009686 (2)ref|XP_011096472.1|4e-81PREDICTED: src substrate protein p85 [Sesamum indicum]

Alignment

This contig is upended


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JMFF019M23+                                                                    TCA
                      ____________________________________________________________
consensus                                                                      TCA
 
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JMFF019M23+           TACGGCTGTAACGTTGAGCAAGATGACGAGCATCTTCTAAAGAAGATCCAGCTATCATTG
                      ____________________________________________________________
consensus             TACGGCTGTAACGTTGAGCAAGATGACGAGCATCTTCTAAAGAAGATCCAGCTATCATTG
 
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JMFF019M23+           CTCTCAAAGGCTCTAGGACCTGATTATACAATAGTCCATTCAGGTCTTCAACCTCCTTCT
                      ____________________________________________________________
consensus             CTCTCAAAGGCTCTAGGACCTGATTATACAATAGTCCATTCAGGTCTTCAACCTCCTTCT
 
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JMFF019M23+           CCACATGTTTTCGAGCATCTCCATAGATAGATGCAGATTTAGATAGAACTTCATCGTTGA
JMFF004H05+             ACATGTTTTCGAGCATCTCCATAGATAGATGCAGATTTAGATAGAACTTCATCGTTGA
                      ____________________________________________________________
consensus             CCACATGTTTTCGAGCATCTCCATAGATAGATGCAGATTTAGATAGAACTTCATCGTTGA
 
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JMFF019M23+           CATTTTCGACACCATATTTGCAGCAATCTTCAGACAGCTTGGTTCCTGCTTCTATATGCT
JMFF004H05+           CATTTTCGACACCATATTTGCAGCAATCTTCAGACAGCTTGGTTCCTGCTTCTATATGCT
                      ____________________________________________________________
consensus             CATTTTCGACACCATATTTGCAGCAATCTTCAGACAGCTTGGTTCCTGCTTCTATATGCT
 
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JMFF019M23+           TATATCCAATAGCTGTAAATGTTTCAGCTGCCTTGACAAGTTCTTTCTGAAAATCCCTTC
JMFF004H05+           TATATCCAATAGCTGTAAATGTTTCAGCTGCCTTGACAAGTTCTTTCTGAAAATCCCTTC
                      ____________________________________________________________
consensus             TATATCCAATAGCTGTAAATGTTTCAGCTGCCTTGACAAGTTCTTTCTGAAAATCCCTTC
 
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JMFF019M23+           CAGAACGGGTAGACCGATACAATTTTTCCAAATGCTGATGCATTTGCAGCTCGACTTCAT
JMFF004H05+           CAGAACGGGTAGACCGATACAATTTTTCCAAATGCTGATGCATTTGCAGCTCGACTTCAT
                      ____________________________________________________________
consensus             CAGAACGGGTAGACCGATACAATTTTTCCAAATGCTGATGCATTTGCAGCTCGACTTCAT
 
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JMFF019M23+           CAATAACCATGACATCAGAGCTTTCATAACCACTTGTACTGAACTGCTTAATTACAGCCT
JMFF004H05+           CAATAACCATGACATCAGAGCTTTCATAACCACTTGTACTGAACTGCTTAATTACAGCCT
                      ____________________________________________________________
consensus             CAATAACCATGACATCAGAGCTTTCATAACCACTTGTACTGAACTGCTTAATTACAGCCT
 
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JMFF019M23+           GTTGTTGTTTGGCAACTTGTTCTTTAAACTTGCTCGCTTGCTTCCTCAGAGCATCCATCT
JMFF004H05+           GTTGTTGTTTGGCAACTTGTTCTTTAAACTTGCTCGCTTGCTTCCTCAGAGCATCCATCT
                      ____________________________________________________________
consensus             GTTGTTGTTTGGCAACTTGTTCTTTAAACTTGCTCGCTTGCTTCCTCAGAGCATCCATCT
 
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JMFF019M23+           CTCCT                                                       
JMFF004H05+           CTCCTTTCCTCACTCTATCTCCCTCTCTCTCTATATATATATGTGTATATATATACTGTT
                      ____________________________________________________________
consensus             CTCCTTTCCTCACTCTATCTCCCTCTCTCTCTATATATATATGTGTATATATATACTGTT
 
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JMFF004H05+           AATTGTAACTGGGTNTGACTCTTGAGGTAGATGAGTGAACACCCAGAAGGAACAGAGCGA
                      ____________________________________________________________
consensus             AATTGTAACTGGGTNTGACTCTTGAGGTAGATGAGTGAACACCCAGAAGGAACAGAGCGA
 
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JMFF004H05+           TGCCGTGGAGAGTTCCGATCGGAAGCGAGAGCTACAGATCTGAAAAAGCAGCTCNCACTT
                      ____________________________________________________________
consensus             TGCCGTGGAGAGTTCCGATCGGAAGCGAGAGCTACAGATCTGAAAAAGCAGCTCNCACTT