Clone JMSF049B02 [sequences]

previous contigF:007887 contigR:012258
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:ATAC012328_154340911002e-20268-6571312-1440+11777e-28240-5271938-2028-12042Arabidopsis thaliana chromosome III BAC T17B22 genomic sequence, complete sequence.
gb:AC133003_17412485551e-06268-651667-794+12656e-21240-5271296-1390-11410Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence.
gb:AC133333_17413404551e-06268-651274-401+13656e-21240-527903-997-11017Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence.
gb:AP005782_18577552551e-06268-651636-763+14622e-18240-5271262-1355-11375Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0079G12.>gb:AP005802_1858067 Oryza sat
gb:AC105363_17379555673e-17240-5271674-1765-11883Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1705B08, complete sequence.
gb:OSJN00068_169425117652e-09234-5271293-1390-11604Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065L13, complete sequence.
gb:AF187317_17751836634e-17240-5271695-1786-11909Arabidopsis thaliana CAF protein (CAF) mRNA, complete cds.
sp|Q9SP32|DICE_ARATH7634e-17240-5271695-1786-11909Endoribonuclease Dicer homolog (EC 3.1.26.-) (CARPEL FACTORY protein) (SHORT INTEGUMENTS 1 protein) (SUSPENSOR1 protein)
gb:AE005172_88915618635e-09240-5271810-1901-12024Arabidopsis thaliana chromosome 1, top arm complete sequence.>gb:AC007323_1535786 Genomic sequence for Arabidopsis thali
gb:AE016959_10231619591e-12228-5271240-1338-11458Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence.>gb:AC087182_1733976 Oryza sativa chromosome 10
gb:AP005914_186004611577e-11234-527171-265-1299Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0027A16.
gb:AP003416_18291658563e-14369-5271377-1429-11651Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05.
gb:AC133333_17413413551e-06268-651274-401+1538Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence.
pir|T48946|T4894610551e-11252-5271279-1369-11531hypothetical protein T15B3.60 - Arabidopsis thaliana>gb:ATT15B3_1554499 Arabidopsis thaliana DNA chromosome 3, BAC clone
gb:AC133333_17413426521e-05268-561274-371+1416Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence.
gb:AF430845_206564812527e-10252-5241808-1898-11917Mus musculus dicer-like protein (Dicer1) mRNA, complete cds.
sp|Q8R418|DICE_MOUSE13527e-10252-5241797-1887-11906Endoribonuclease Dicer (EC 3.1.26.-) (Double-strand-specific ribonuclease mDCR-1).
gb:AK129241_206947214527e-10252-5241366-1456-11475Mus musculus mRNA for mKIAA0928 protein.
gb:AF484523_206691915527e-10252-524252-342-1361Mus musculus endoribonuclease Dicer (Dicer) gene, partial cds.
gb:AB081470_204770516519e-10252-5241797-1887-11906Mus musculus mRNA for double-strand-specific ribonuclease MDCR, complete cds.
gb:AY386968_142997419507e-09252-5241814-1904-11923Bos taurus dicer (dicer) mRNA, complete cds.
gb:AX287264_146530720499e-09252-5241815-1905-11924Sequence 1 from Patent WO0168836.>gb:AB028449_1865773 Homo sapiens mRNA for helicase-MOI, complete cds.
gb:AB023145_186546721499e-09252-5241813-1903-11922Homo sapiens mRNA for KIAA0928 protein, partial cds.
sp|Q9UPY3|DICE_HUMAN22499e-09252-5241803-1893-11912Endoribonuclease Dicer (EC 3.1.26.-) (Helicase with RNase motif) (Helicase-MOI).>gb:HSA132261_2000277 Homo sapiens mRNA
gb:AY386319_253105123499e-09252-5241134-1224-11243Danio rerio Dicer1 (dicer1) mRNA, partial cds.
gb:AX877989_147724824499e-09252-524445-535-1554Sequence 12894 from Patent EP1074617.
gb:HSM801262_118611025499e-09252-524416-506-1525Homo sapiens mRNA; cDNA DKFZp434A0427 (from clone DKFZp434A0427).
pir|T34544|T3454426499e-09252-524416-506-1525hypothetical protein DKFZp434A0427.1 - human (fragment)
sp|P34529|DCR1_CAEEL27438e-06231-5241729-1824-11845Endoribonuclease dcr-1 (EC 3.1.26.-).>gb:L14331_1386863 Caenorhabditis elegans cosmid K12H4, complete sequence.
pir|S44849|S4484928438e-06231-5241706-1801-11822K12H4.8 protein - Caenorhabditis elegans
gb:AY050230_128994329430.005228-623724-855-1865Drosophila melanogaster SD01621 full length cDNA.
gb:AE014297_114087530430.005228-6232108-2239-12249Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003740_1222868 Drosophila melanogaster chromosome 3R, sec
gb:AY042815_156088031410.019234-524192-286-1391Arabidopsis thaliana Unknown protein (MQC12.19) mRNA, complete cds.>gb:AY081681_1568941 Arabidopsis thaliana unknown pro
gb:AB024036_151585732410.019234-524192-286-1391Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MQC12.
gb:AY239359_131235533410.019228-5242147-2247-12259Anopheles gambiae strain G3 dicer-1 mRNA, complete cds.
gb:AY394484_253166434410.025387-5242-49-153Danio rerio dicer mRNA, partial cds.
gb:AE017340_45657235380.21240-527118-213-1229Idiomarina loihiensis L2TR, complete genome.
gb:HSA132258_200027636360.61228-467186-267-1496Homo sapiens mRNA for staufen protein, partial.
gb:AL133174_191821837360.61228-467192-273-1502Human DNA sequence from clone RP3-470L14 on chromosome 20 Contains the CSE1L gene for chromosome segregation 1 (yeast ho
gb:AL133174_191821538360.61228-467267-348-1577Human DNA sequence from clone RP3-470L14 on chromosome 20 Contains the CSE1L gene for chromosome segregation 1 (yeast ho
gb:AF061938_187992939360.61228-467186-267-1496Homo sapiens staufen protein (STAU) mRNA, alternatively spliced, complete cds.>gb:AF061940_1879931 Homo sapiens staufen
gb:AP003933_183545340360.61387-527156-202-1256Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0066C06.>gb:AP004258_1839259 Oryza sat
gb:HSM801575_118626841360.61228-467186-267-1496Homo sapiens mRNA; cDNA DKFZp564J1516 (from clone DKFZp564J1516).>gb:AL133174_1918217 Human DNA sequence from clone RP3-
gb:CR860639_118469842360.61228-467185-266-1495Pongo pygmaeus mRNA; cDNA DKFZp459A0124 (from clone DKFZp459A0124).
sp|O95793|STAU_HUMAN43360.61228-467267-348-1577Double-stranded RNA-binding protein Staufen homolog.>gb:AF061939_1879930 Homo sapiens staufen protein (STAU) mRNA, alter
gb:AY394485_253166544351.0396-5242-46-147Oncorhynchus mykiss Dicer gene, partial cds.>gb:AY394486_2531666 Oncorhynchus mykiss Dicer mRNA, partial cds.
gb:AE017260_41893945351.0228-527122-222-1232Wolbachia endosymbiont of Drosophila melanogaster, section 5 of 5 of the complete genome.>gb:AE017196_1059576 Wolbachia
gb:HSSONA_202045546342.3240-4131364-1424-11523Homo sapiens son-a mRNA.
gb:AF380182_189947647342.3240-41359-119-1147Homo sapiens SON DNA binding protein isoform D (SON) mRNA, complete cds, alternatively spliced.
gb:AF380179_189947348342.3240-4132052-2112-12140Homo sapiens SON DNA binding protein isoform A (SON) mRNA, complete cds, alternatively spliced.
gb:AB012240_151168049342.3234-527539-637-1957Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18C1.
gb:AE016786_33280950343.0298-585345-432+1438Pseudomonas putida KT2440 section 13 of 21 of the complete genome.>gb:AE015451_947886 Pseudomonas putida KT2440 complete
sp|Q9ZBQ7|RNC_STRCO51343.0234-527141-240-1272Ribonuclease III (EC 3.1.26.3) (RNase III).>pir|T35656|T35656 ribonuclease III - Streptomyces coelicolor>gb:SCO939124_17
gb:AY734755_6444027333.5187-477186-278+1848Pasteurella multocida subsp. multocida heme acquisition system receptor (hasR) gene, complete cds.
gb:CR628337_1143248333.5133-480269-395+1782Legionella pneumophila str. Lens complete genome.
gb:AF539862_12802979334.6401-499548-580-1774Hydra vulgaris nematocyst outer wall antigen precursor (NOWA) mRNA, complete cds.
gb:AE006199_21651010336.0187-477186-278+1848Pasteurella multocida subsp. multocida str. Pm70 section 166 of 204 of the complete genome.>gb:AE004439_1119240 Pasteure
gb:BT008181_215111352333.9228-449147-221-1367Synthetic construct Homo sapiens TAR (HIV) RNA binding protein 2 mRNA, partial cds.
gb:AY658047_214705753333.9309-527115-189-1230Synthetic construct Peudomonas aeruginosa clone FLH040397.01F PA0770 gene, partial cds.
gb:HUMTRBP_203786154333.9228-449126-200-1345Human TAR RNA binding protein (TRBP) mRNA, complete cds.
gb:HSU08998_202191655333.9228-449147-221-1366Homo sapiens TAR RNA binding protein 2 (TRBP2) mRNA, complete cds.
gb:BC005860_196988856333.9228-449147-221-1366Homo sapiens TAR (HIV) RNA binding protein 2, transcript variant 1, mRNA (cDNA clone MGC:3390 IMAGE:2960701), complete c
pir|A38430|A3843057333.9228-449144-218-1363trans-activation-responsive RNA-binding protein - human (fragment)
sp|Q15633|TRBP_HUMAN58333.9228-449147-221-1366TAR RNA-binding protein 2 (Trans-activation responsive RNA-binding protein).>pir|G01420|G01420 TAR RNA-binding protein 2
sp|Q9KPB2|RNC_VIBCH59333.9327-527115-182-1225Ribonuclease III (EC 3.1.26.3) (RNase III).>pir|B82073|B82073 ribonuclease III VC2461 [imported] - Vibrio cholerae (stra
sp|Q9XCX9|RNC_PSEAE60333.9309-527115-189-1229Ribonuclease III (EC 3.1.26.3) (RNase III).>pir|E83548|E83548 ribonuclease III PA0770 [imported] - Pseudomonas aeruginos
gb:BC002028_208880561335.1228-449146-220-1365Mus musculus TAR (HIV) RNA binding protein 2, mRNA (cDNA clone MGC:5911 IMAGE:3489376), complete cds.
gb:BT011073_135768062335.1545-7151478-1533-21640Drosophila melanogaster SD11113 full insert cDNA.
gb:AB073024_119745463335.1545-7151499-1554-21722Drosophila melanogaster dcr-2 mRNA for double-strand-specific ribonuclease, complete cds.
gb:AE013599_113245364335.1545-7151499-1554-21722Drosophila melanogaster chromosome 2R, complete sequence.>gb:AE003802_1225199 Drosophila melanogaster chromosome 2R, sec
sp|P97473|TRBP_MOUSE65335.1228-449146-220-1365TAR RNA-binding protein 2 (Protamine-1 RNA binding protein) (PRM-1 RNA binding protein).>gb:MMU79962_2123578 Mus musculu
gb:AY458647_62001066336.7234-524117-217-1231Uncultured bacterium 580 clone EBAC000-36A07 genomic sequence.
gb:AY236058_60119767336.7228-52762-162-1171Ehrlichia ruminantium Welgevonden pCS20 region ribonuclease III gene, complete cds; and cytochrome c oxidase assembly pr
gb:CR925677_11810568336.7228-527118-218-1227Ehrlichia ruminantium str. Gardel, complete genome.
gb:CR767821_11717369336.7228-527118-218-1227Ehrlichia ruminantium strain Welgevonden, complete genome.>gb:CR925678_119064 Ehrlichia ruminantium str. Welgevonden, co
gb:BC088555_256568570328.7228-473304-387-1624Xenopus tropicalis hypothetical LOC496843, mRNA (cDNA clone MGC:97733 IMAGE:6987125), complete cds.
gb:AJ721000_250318771328.7228-467363-444-1712Gallus gallus mRNA for hypothetical protein, clone 32c1.
gb:AP000413_182007972328.7277-537732-808+1845Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K7L4.
gb:AE017157_39340073328.7231-524124-222-1237Chlamydophila pneumoniae TW-183, section 1 of 4 of the complete genome.>gb:AE009440_1027662 Chlamydophila pneumoniae TW-
sp|Q9Z9C7|RNC_CHLPN74328.7231-524124-222-1237Ribonuclease III (EC 3.1.26.3) (RNase III).>pir|G86497|G86497 ribonuclease III [imported] - Chlamydophila pneumoniae (s