Clone JMSF046C11 [sequences]

previous contigF:006432 contigR:011109
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AF110226_176876717343.3700-75048-64+111828e-45159-767101-299-1299Nicotiana tabacum nuclear RNA binding protein (RggA) mRNA, partial cds.
gb:BVU313092_16431968360.86142-1921-17+141403e-32159-767158-356-1356Beta vulgaris mRNA for salt tolerance protein 1 (sato1 gene).
gb:BVU313093_164319721697e-41162-767159-355-1356Beta vulgaris mRNA for salt tolerance protein 2 (sato2 gene).
gb:AC121365_174019215342.5142-1921-17+191241e-27159-767182-390-1390Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence.
gb:AF110228_176876931458e-34159-767154-355-1356Spinacia oleracea nuclear RNA binding protein A (RggA) mRNA, complete cds.
pir|T12180|T1218051403e-32159-767168-370-1370probable transcription factor - fava bean>gb:VFPTF1_1727183 V.faba mRNA for putative transciption factor (1556bp).
gb:AF110229_176877061381e-31159-76740-240-1240Spinacia oleracea nuclear RNA binding protein B (RggB) mRNA, partial cds.
gb:AP003292_182744571329e-30159-767172-377-1380Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02.
gb:AC105260_173788481265e-28159-767172-383-1383Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence.>gb:AC136216_1742992 Oryza sativ
pir|F71435|F71435101241e-27159-767158-355-1355probable nuclear antigen - Arabidopsis thaliana>gb:ATCHRIV45_1545485 Arabidopsis thaliana DNA chromosome 4, contig fragm
gb:AP003022_1824290111233e-27159-767167-375-1378Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11.>gb:AP003330_1828026 Oryza sativa (
gb:AF110230_1768771121227e-27297-76751-204-1247Spinacia oleracea nuclear RNA binding protein C (RggC) mRNA, partial cds.
gb:AY084828_1569911131229e-27159-767157-354-1354Arabidopsis thaliana clone 118826 mRNA, complete sequence.
gb:AY085859_1570923141202e-26165-767158-357-1357Arabidopsis thaliana clone 19104 mRNA, complete sequence.
gb:AB018117_1513849151202e-26165-767158-357-1357Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQL5.>gb:AY140040_1582480 Arabidopsis thaliana putative protein
gb:AY087413_1572444161181e-25294-761149-299-1360Arabidopsis thaliana clone 35156 mRNA, complete sequence.
pir|G71444|G71444171159e-25294-761149-299-1360hypothetical protein - Arabidopsis thaliana>gb:ATCHRIV46_1545554 Arabidopsis thaliana DNA chromosome 4, contig fragment
gb:AY560385_161490318804e-14297-54517-101-1115Tagetes minuta thermoinhibition-associated THB-4 protein mRNA, partial cds.
gb:AC092852_173578519612e-08297-635246-356-1642Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence.
gb:AP003292_182744620521e-05159-4401-98-1101Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02.
gb:AJ786380_12842501506e-05500-69183-146+2366Cryptosporidium parvum rop-r gene for repeat organellar protein-related, isolate ISSC6.
pir|S54157|S541572400.046500-7156-84-3279extensin-like protein - cowpea (fragment)
gb:AE014297_114133621400.036408-749164-263-1412Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE014297_1141337 Drosophila melanogaster chromosome 3R, com
gb:AE014297_114133522400.036408-749195-294-1443Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003750_1223328 Drosophila melanogaster chromosome 3R, sec
gb:AF046998_4728653390.078505-75052-125-1186Borrelia burgdorferi plasmid cp32 2.9-8 loci sequence, BlyA (blyA), BlyB (blyB), bbs27 protein (bbs27), RepU (repU), Rep
gb:BC067912_255489823390.10495-767223-302-1406Xenopus tropicalis hypothetical protein MGC69561, mRNA (cDNA clone MGC:69561 IMAGE:5379016), complete cds.
gb:CR380952_165059924390.10627-75830-65-186Candida glabrata strain CBS138 chromosome F complete sequence.
gb:AC092263_173526525390.14347-628160-243+2383Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence.
pir|T28394|T283944380.23515-74810-82-3117hypothetical protein MSV234 [imported] - Melanoplus sanguinipes entomopoxvirus>gb:AF063866_2188055 Melanoplus sanguinipe
gb:BBU45421_7478195370.29505-68434-100-1143Borrelia burgdorferi 2.9-1 locus, ORF 5-8, ORF-A-D, REP+, REP-, and lipoprotein (LP) genes, complete cds.
gb:BBU45422_7478246370.50502-72039-103-1174Borrelia burgdorferi 2.9-2 locus, ORF-C gene, partial cds, ORF-D, REP+, REP-, and lipoprotein (LP) genes, complete cds.
pir|T18296|T182967370.50503-694904-970+22139myosin heavy chain - Entamoeba histolytica>gb:ENHMHCAX_1384762 Entamoeba histolytica myosin heavy chain (mhcA) gene, com
gb:AY672709_134550926370.30405-749170-266-1331Strongyloides ratti ALT-1 mRNA, complete cds.>gb:AY672710_1345510 Strongyloides ratti ALT-1 gene, complete cds.
gb:BC083399_256322627370.52495-758169-247-1347Danio rerio zgc:103482, mRNA (cDNA clone MGC:103482 IMAGE:7237781), complete cds.
gb:AE016819_174934028360.68699-75232-49-186Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence.
gb:BC079337_210745829360.89495-767209-288-1392Rattus norvegicus PAI-1 mRNA-binding protein, mRNA (cDNA clone MGC:94773 IMAGE:7106027), complete cds.
gb:AF388527_206469130360.89495-767209-288-1392Rattus norvegicus hypothetical RNA binding protein RDA288 mRNA, complete cds.
gb:YSCECT1_172884431360.89699-75830-49-165Yeast DNA for CTP: phosphoethanolamine cytidylyltransferase and ORFs, complete cds.
pir|S12201|S1220132360.89699-75830-49-184ATP synthase regulatory factor, 15K - yeast (Saccharomyces cerevisiae)>gb:AY558270_1614497 Saccharomyces cerevisiae clon
sp|P16965|STF2_YEAST33360.89699-75829-48-183ATPase stabilizing factor 15 kDa protein.
gb:AE014186_9381019351.5503-6824794-4853+25922Plasmodium falciparum 3D7 chromosome 11 complete sequence.>gb:AE014837_1228835 Plasmodium falciparum 3D7 chromosome 11 s
gb:PFASANTX_139407610351.9499-750103-186+1217Plasmodium falciparum KF1917 S-antigen gene, complete cds.
gb:PF111E_139200811351.9488-718106-183+2219Plasmodium falciparum 11-1 gene part 5.
gb:AE017333_44870912351.9527-67383-131+2138Bacillus licheniformis DSM 13, complete genome.>gb:CP000002_858509 Bacillus licheniformis ATCC 14580, complete genome.
pir|S00485|S0048513351.9488-7181835-1912+21948gene 11-1 protein precursor - malaria parasite (Plasmodium falciparum) (fragments)
gb:BC046876_254977534351.2495-758207-283-1391Danio rerio zgc:55489, mRNA (cDNA clone MGC:55489 IMAGE:2640661), complete cds.>gb:BC068350_2555038 Danio rerio zgc:5548
gb:BC013665_209187935351.2495-767203-282-1386Mus musculus RIKEN cDNA 1200009K13 gene, mRNA (cDNA clone MGC:18794 IMAGE:4193513), complete cds.>gb:BC030502_2096836 Mu
gb:AK088278_117530436351.2495-767203-282-1386Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430009L23 product:HYPOT
gb:AK010860_115603637351.2495-767209-288-1392Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2500003B06 product:HYPOTHETICAL RNA BI
gb:HS1LATA_243707038351.5389-58959-113+2305Herpes simplex virus type one (HSV-1) latency associated transcript (LAT).
sp|P17588|LRP1_HHV1F39352.0389-58927-81+2340Latency-related protein 1.>pir|A33337|WMBEL1 latency-related protein 1 - human herpesvirus 1 (strain F)>gb:HS1LATRA_2437
gb:AF275345_178252414342.5491-74821-98+21310Lycopersicon esculentum putative permease gene, partial cds; suppressor-like protein, putative centromere protein, putat
sp|Q8CSA7|SYA_STAEP16342.5479-703722-796+2876Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS).>gb:CP000029_81786 Staphylococcus epidermidis RP62A,
gb:AY133874_158169418343.3475-750301-405-1739Arabidopsis thaliana clone U18540 unknown protein (At2g45005) mRNA, complete cds.
gb:AE014185_93795019343.3503-7363697-3769+210589Plasmodium falciparum 3D7 chromosome 10 complete sequence.>gb:AE014835_1228684 Plasmodium falciparum 3D7 chromosome 10 s
gb:AP006627_56472020343.3512-721332-404+2612Bacillus clausii KSM-K16 DNA, complete genome.
pir|H83978|H8397821343.3497-721327-404+2614GTP-binding protein TypA/BipA (tyrosine phosphorylated protein A) BH2632 [imported] - Bacillus halodurans (strain C-125)
gb:HS1LSSDS_243707440342.6389-58927-81+2272Herpes simplex virus type 1 latency-associated transcript mRNA.
gb:AF066072_123781241342.6374-59510-77+2135Dictyostelium discoideum SP85 (pspB) gene, partial cds.
gb:BC068016_255498542343.4404-601345-408+2711Danio rerio zgc:76890, mRNA (cDNA clone MGC:76890 IMAGE:6520167), complete cds.
gb:AP002855_182320343343.4407-595401-463+2539Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08.
gb:AF318582_178561644343.4407-595292-354+2430Oryza sativa putative transcription factor OsGLK2 (Glk2) mRNA, partial cds.
gb:AF066073_123781345343.4374-56510-65+2139Dictyostelium discoideum SP85 (pspB) gene, partial cds.
gb:BBU45424_74783422334.3505-74724-96-1161Borrelia burgdorferi 2.9-4 locus, ORF-C gene, partial cds, ORF-D, REP+, REP-, and lipoprotein (LP) genes, complete cds.
sp|P42539|YO04_BPL223334.3443-73920-115+2161Hypothetical 18.2 kDa protein (ORF4).>gb:BL2CG_1504319 Bacteriophage L2 (from Mycoplasma), complete genome.
gb:CR382130_166287024335.6538-750169-248-1382Yarrowia lipolytica chromosome D of strain CLIB99 of Yarrowia lipolytica.
gb:AE017225_40966425335.6491-667111-169+2778Bacillus anthracis str. Sterne, complete genome.
gb:AE017038_38456926335.6491-667103-161+2770Bacillus anthracis str. Ames section 15 of 18 of the complete genome.>gb:AE017334_454416 Bacillus anthracis str. 'Ames A
sp|P87293|YDN1_SCHPO27335.6523-711628-689-1830Hypothetical protein C16A10.01 in chromosome I.>pir|T37766|T37766 probable integral membrane protein - fission yeast (S
gb:CP000001_85473628337.3491-667111-169+2778Bacillus cereus ZK, complete genome.
gb:BA000028_69497329337.3491-721333-404+2607Oceanobacillus iheyensis HTE831 DNA, complete genome.
gb:AE017355_46542030337.3491-667111-169+2778Bacillus thuringiensis serovar konkukian str. 97-27, complete genome.
gb:AE017012_37925831337.3491-667111-169+2778Bacillus cereus ATCC 14579 section 15 of 18 of the complete genome.>gb:AE016877_1019508 Bacillus cereus ATCC 14579 compl
gb:BC046574_254963346334.4495-767210-288-1392Xenopus laevis hypothetical protein MGC53445, mRNA (cDNA clone MGC:53445 IMAGE:5571963), complete cds.
pir|S53404|S5340447334.4582-75830-81-186ATP synthase regulatory factor homolog YLR327c - yeast (Saccharomyces cerevisiae)>gb:YSCL8543_1729595 Saccharomyces cer
sp|Q06177|STFL_YEAST48334.4582-75829-80-185STF2-like protein YLR327c.
pir|D88042|D8804249335.8684-749196-217-1378protein F56D12.5 [imported] - Caenorhabditis elegans>gb:AF016672_1232685 Caenorhabditis elegans cosmid F56D12, complete
gb:CR548612_137535432329.5488-6881044-1105+21614Paramecium tetraurelia macronuclear largest chromosome, complete sequence.
pir|T37812|T3781233329.5509-700131-196-3217very hypothetical protein SPAC17A2.11 - fission yeast (Schizosaccharomyces pombe)>gb:SPAC17A2_1716705 S.pombe chromosom
sp|Q58718|RA50_METJA34329.5500-727419-504+21005DNA double-strand break repair rad50 ATPase.>pir|A64465|A64465 hypothetical protein MJ1322 - Methanococcus jannaschii>gb
sp|P54659|MVPB_DICDI35329.5500-703661-728+2846Major vault protein beta (MVP-beta).>pir|A57241|A57241 major vault protein B - slime mold (Dictyostelium discoideum)>gb:
gb:CR382133_166657850329.8684-75830-54-192Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii.