Clone JMSF043I23 [sequences]

previous contigF:007561 contigR:012711
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
sp|Q8L4F8|RPO3_NICSY11781e-4315-6891-228+3101325e-30479-694906-977-3977DNA-directed RNA polymerase 3, chloroplast precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RNA polymerase 3
gb:NTA416570_169139521764e-4315-6891-227+361334e-30479-694906-977-3977Nicotiana tabacum mRNA for chloroplast RNA polymerase, rpoT3-tom gene.
sp|O24600|RPOT_ARATH41326e-30300-689121-249+3231233e-27479-694922-993-3993DNA-directed RNA polymerase, chloroplast precursor (EC 2.7.7.6).>pir|G84632|G84632 hypothetical protein At2g24120 [impor
gb:NSY302018_169122391032e-21420-686165-253+321372e-31479-694931-1002-31002Nicotiana tabacum mRNA for phage-type RNA polymerase (rpoT1-tom gene).
gb:NSY416568_169123071058e-22420-686165-253+371334e-30479-694931-1002-31002Nicotiana sylvestris mRNA for mitochondrial RNA polymerase (rpoT1 gene).
sp|Q93Y94|RPO1_NICSY81058e-22420-686165-253+391334e-30479-694931-1002-31002DNA-directed RNA polymerase 1, mitochondrial precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RNA polymerase
gb:AB058954_1521739111029e-21420-686165-253+381334e-30479-694931-1002-31002Nicotiana sylvestris NsRpoT-A mRNA for T7 bacteriophage-type single subunit RNA polymerase, complete cds.
gb:ATRNAPOL_155407251096e-23231-686103-261+3211251e-27479-694940-1011-31011Arabidopsis thaliana DNA-directed RNA polymerase gene.
pir|T51399|T5139961096e-23231-686103-261+3221251e-27479-694940-1011-31011DNA-directed RNA polymerase, mitochondrial - Arabidopsis thaliana>gb:ATF14F8_1548560 Arabidopsis thaliana DNA chromosome
gb:NSY302019_169122413991e-19420-686181-269+3141302e-29479-694949-1020-31020Nicotiana sylvestris mRNA for phage-type RNA polymerase (rpoT2 gene).
sp|Q8VWF8|RPO2_NICSY14991e-19420-686181-269+3151302e-29479-694949-1020-31020DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RN
gb:NTA416569_169139412996e-20420-686182-270+3161295e-29479-694950-1021-31021Nicotiana tabacum mRNA for mitochondrial and chloroplast RNA polymerase (rpoT2-tom gene).
gb:AJ586899_181185117951e-18417-68622-111+3111326e-30479-709786-862-3862Hordeum vulgare partial mitochondrial mRNA for RNA polymerase (rpoTm gene).
gb:CARNAPOLY_164545726934e-18420-686150-238+331342e-30479-694917-988-3988C.album mRNA for mitochondrial single-subunit DNA-dependent RNA polymerase.
gb:AF091838_176746127936e-18417-686164-253+3121326e-30479-709929-1005-31005Triticum aestivum single-subunit RNA polymerase G mRNA, complete cds; mitochondrial gene for mitochondrial product.
sp|P92969|RPOM_ARATH21942e-18420-686131-219+3181295e-29479-694905-976-3976DNA-directed RNA polymerase, mitochondrial precursor (EC 2.7.7.6).>pir|D96714|D96714 DNA-directed RNA polymerase [import
gb:AB096014_152544223943e-18417-686175-264+3171295e-29479-694946-1017-31017Oryza sativa (japonica cultivar-group) rpoT1 mRNA for RpoT1, complete cds.>gb:AB120431_1527962 Oryza sativa (japonica cu
gb:AB096015_1525443101032e-21366-68999-207+3271194e-26479-694882-953-3953Oryza sativa (japonica cultivar-group) rpoT2 mRNA for RpoT2, complete cds.>gb:AB120430_1527961 Oryza sativa (japonica cu
gb:AF127021_177049918951e-18417-686133-222+3201273e-28479-694904-975-3975Zea mays T7-like RNA polymerase (rpoT1) mRNA, nuclear gene encoding mitochondrial protein, complete cds.
gb:ATY08137_155745820942e-18420-686131-219+3191289e-29479-694905-976-3976Arabidopsis thaliana mRNA for mitochondrial single-subunit DNA-dependent RNA polymerase.
gb:AF127022_177050015974e-19375-689104-205+3241234e-27479-694881-952-3952Zea mays T7-like RNA polymerase (rpoT2) mRNA, nuclear gene encoding chloroplast protein, complete cds.
pir|T02751|T0275116974e-19375-689104-205+3251234e-27479-694881-952-3952DNA-directed RNA polymerase (EC 2.7.7.6) - maize>gb:ZMA005343_1731416 Zea mays Ama gene encoding single-subunit RNA poly
gb:HVU507396_168278824943e-18378-68996-198+3291195e-26479-694877-948-3948Hordeum vulgare subsp. vulgare mRNA for DNA-directed RNA polymerase, chloroplast precursor (rpoT gene).
gb:HVU507395_168278725943e-18378-68996-198+3301195e-26479-694877-948-3948Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19.
gb:TAU34402_172470728921e-17378-68997-199+3281195e-26479-694878-949-3949Triticum aestivum single-subunit RNA polymerase C mRNA, complete cds.
gb:PPA416854_170122029852e-15288-686189-316+3351142e-24479-6941016-1087-31087Physcomitrella patens rpoT1 gene for RNA polymerase, exons 1-19.
gb:AB055214_152143330852e-15288-686189-316+3361142e-24479-6941016-1087-31087Physcomitrella patens rpoT1 mRNA for single-subunit RNA polymerase, complete cds.
gb:AP005453_185208733791e-13510-6891-60+3261194e-26479-694735-806-3806Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04.
gb:PPA416855_170122131812e-14402-686203-300+3371072e-22479-694994-1065-31065Physcomitrella patens rpoT2 gene for RNA polymerase, exons 1-20.
gb:AB055215_152143432812e-14402-686203-300+3381072e-22479-694994-1065-31065Physcomitrella patens rpoT2 mRNA for single-subunit RNA polymerase, complete cds.
gb:NTA416571_169139611372e-31479-694644-715-3715Nicotiana tabacum partial nictaRpoT1-tom gene for mitochondrial RNA polymerase, exons 2-19.
gb:NTA416575_169140041334e-30479-694486-557-3557Nicotiana tabacum partial nictaRpoT3-tom gene for plastid RNA polymerase, exons 7-20.
gb:NTA416572_169139751334e-30479-694102-173-3173Nicotiana tabacum partial nictaRpoT1-syl gene for mitochondrial RNA polymerase, exons 15-19.
gb:ATDDRNPOL_154805631326e-30300-689121-249+3282Arabidopsis thaliana gene encoding DNA-directed RNA polymerase, exon 1.
gb:NTA416574_1691399131302e-29479-694261-332-3332Nicotiana tabacum partial nictaRpoT2-syl gene for mitochondrial and plastid RNA polymerase, exons 9-19.
gb:HVT7T3RNA_1682536311195e-26479-69458-129-3129H.vulgare mRNA for putative T7/T3-like RNA polymerase, partial.
pir|T06188|T06188321195e-26479-69458-129-3129probable DNA-directed RNA polymerase (EC 2.7.7.6) - barley (fragment)
gb:OST3T7RNA_1698383331173e-25479-69416-87-387O.sativa mRNA for putative T3/T7-like RNA polymerase, partial.
pir|T04123|T04123341173e-25479-69416-87-387probable DNA-directed RNA polymerase (EC 2.7.7.6) - rice (fragment)
gb:AY081704_156896419942e-18420-686131-219+3305Arabidopsis thaliana At1g68990/T6L1_17 mRNA, complete cds.
gb:AP005550_185393222943e-18417-686175-264+3951Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1058_F03.>gb:AP005729_1856727 Oryza sativa
gb:AF361480_126556539891e-16479-709874-950-3950Dictyostelium discoideum DNA-dependent RNA polymerase RpmA (rpmA) gene, complete cds; nuclear gene for mitochondrial pro
sp|O13993|RPOM_SCHPO40796e-14479-7091018-1120-31120DNA-directed RNA polymerase, mitochondrial precursor (EC 2.7.7.6).>pir|T38431|T38431 DNA-directed RNA polymerase precurs
gb:AF273674_125768941736e-12479-7061426-1503-31503Plasmodium falciparum DNA-dependent RNA polymerase (TRNAP) gene, complete cds; nuclear gene for probable mitochondrial p
gb:AE014186_93822742736e-12479-7061454-1531-31531Plasmodium falciparum 3D7 chromosome 11 complete sequence.>gb:AE014839_1228961 Plasmodium falciparum 3D7 chromosome 11 s
gb:AK085666_117455143665e-10479-7001115-1207-31207Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730004A08 pr
gb:AK053356_117040844665e-10479-7001115-1207-31207Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130011L04 product:similar to DNA-DIR
gb:AK003792_115207245665e-10479-700370-462-3462Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110018N15 product:similar to DNA-
gb:AF200705_247978446636e-09479-6881148-1235-31235Xenopus laevis RNA polymerase (mtRPO) mRNA, complete cds; nuclear gene for mitochondrial product.
gb:CR380957_165305447603e-08560-6941161-1205-31326Candida glabrata strain CBS138 chromosome K complete sequence.
gb:AF303582_126055048603e-08479-6881198-1274-31274Trypanosoma brucei RNA polymerase (MTRNAP) gene, complete cds, nuclear gene for mitochondrial product.
gb:AC004449_187457749604e-08479-6881149-1230-31230Homo sapiens chromosome 19, cosmid R33683, complete sequence.
sp|O00411|RPOM_HUMAN50604e-08479-6881149-1230-31230DNA-directed RNA polymerase, mitochondrial precursor (EC 2.7.7.6) (MTRPOL).>gb:HSU75370_2025972 Human mitochondrial RNA
gb:AY119551_130112051591e-07479-709148-244-3244Drosophila melanogaster GH27547 full insert cDNA.
gb:AE014134_112695952591e-07479-7091273-1369-31369Drosophila melanogaster chromosome 2L, complete sequence.>gb:AE003587_1216642 Drosophila melanogaster chromosome 2L, sec
pir|S56218|S5621853573e-07560-7151178-1229-31351DNA-directed RNA polymerase (EC 2.7.7.6), mitochondrial - yeast (Saccharomyces cerevisiae)>gb:YSCCHRVIN_1728473 Saccharo
sp|P13433|RPOM_YEAST54573e-07560-7151178-1229-31351DNA-directed RNA polymerase, mitochondrial precursor (EC 2.7.7.6).>gb:YSCRPLA_1730506 Yeast (S.cerevisiae) mitochondrion
gb:CEY105E8A_136922155573e-07479-694857-944-3944Caenorhabditis elegans YAC Y105E8A, complete sequence.
pir|B97504|B9750456551e-06482-688792-862-3863RNA polymerase [imported] - Agrobacterium tumefaciens (strain C58, Cereon)>pir|AE2722|AE2722 DNA-directed RNA polymeras
gb:CR382127_166000057552e-06560-7091165-1214-31345Yarrowia lipolytica chromosome A of strain CLIB99 of Yarrowia lipolytica.
sp|P38671|RPOM_NEUCR58552e-06560-6941175-1219-31422DNA-directed RNA polymerase, mitochondrial precursor (EC 2.7.7.6).>pir|T18363|T18363 DNA-directed RNA polymerase (EC 2.7
gb:CR382124_165655759542e-06560-6941099-1143-31263Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:AE016816_174691460512e-05560-6941134-1178-31295Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence.
gb:CR382136_166899061512e-05560-6941149-1193-31312Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii.
gb:CR382138_167157162491e-04578-6881093-1129-31271Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii.
sp|P06221|RPOL_BPSP663473e-04482-694802-873-3874DNA-directed RNA polymerase (EC 2.7.7.6).>gb:NCSP6RNP_1506943 Bacteriophage SP6 gene for RNA polymerase.
gb:CR382138_167156964473e-04578-685201-236-3378Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii.
pir|S07380|S0738065473e-04482-694802-873-3874DNA-directed RNA polymerase (EC 2.7.7.6) - Salmonella phage SP6>gb:AY288927_1499322 Enterobacteria phage SP6, complete g
gb:AF542530_181010866466e-04572-6941017-1057-31202Cryptococcus neoformans var. neoformans strain JEC20 mating type a locus, complete sequence.
gb:AF542529_181008967466e-04572-6941017-1057-31180Cryptococcus neoformans var. grubii strain H99 mating type alpha locus, complete sequence.
gb:AF542528_181004368466e-04572-6941017-1057-31202Cryptococcus neoformans var. grubii strain 125.91 mating type a locus, complete sequence.
gb:AE017344_175654069466e-04572-6941017-1057-31202Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence.
gb:AE017344_175653970466e-04572-6941017-1057-31180Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence.>gb:AF542531_1810150 Cryptococcus neoforma
gb:AY710430_162393771466e-04572-6941017-1057-31180Cryptococcus gattii strain WM276 MATalpha locus, complete sequence.
gb:AY710429_162389872466e-04572-6941017-1057-31180Cryptococcus gattii strain E566 MATa locus, complete sequence.
gb:AY421967_160515073466e-04572-6941017-1057-31180Cryptococcus gattii strain ATCC 32609 MAT-alpha mating locus, fragment IV.
gb:AF493143_149374074468e-04482-688812-884-3885Pseudomonas phage gh-1, complete sequence.
gb:AY299121_149939875450.001479-715675-746-3746Xanthomonas oryzae bacteriophage Xp10 genomic DNA, complete genome.
gb:AY370674_150058776450.002482-694803-874-3875Enterobacteria phage K1-5, complete genome.
gb:BPH251805_150461377390.071482-688811-883-3884Bacteriophage phiYeO3-12 complete genome.
gb:BAC505558_150389978390.071482-709745-815-3816Bacteriophage phiKMV complete genome.
sp|P07659|RPOL_BPT379390.071482-688811-883-3884DNA-directed RNA polymerase (EC 2.7.7.6).>pir|A29060|RNBPT3 DNA-directed RNA polymerase (EC 2.7.7.6) - phage T3>gb:BT331
gb:AY247822_149808180370.35482-688810-882-3883Yersinia pestis phage phiA1122, complete genome.
gb:AE013209_29023634342.4507-650241-290+3324Thermoanaerobacter tengcongensis MB4, section 236 of 244 of the complete genome.>gb:AE008691_1112301 Thermoanaerobacter
gb:AE016782_33169381342.3482-694777-851-3852Pseudomonas putida KT2440 section 9 of 21 of the complete genome.>gb:AE015451_946770 Pseudomonas putida KT2440 complete
gb:OSU34283_169843782343.0656-694155-167-3167Oryza sativa putative T3/T7-like RNA polymerase mRNA, partial cds.
pir|T03237|T0323783343.0656-694155-167-3167probable DNA-directed RNA polymerase (EC 2.7.7.6) - rice (fragment)
gb:AY246697_159258035335.3288-3743968-3996+37191Alternaria brassicae nonribosomal peptide synthase (NRPS1) gene, complete cds.
gb:AC024202_120425836329.066-662380-544+3816Caenorhabditis elegans cosmid Y71H2B, complete sequence.
gb:AP006841_57413337329.0513-67422-75+3348Bacteroides fragilis YCH46 DNA, complete genome.