Clone JMSF034M20 [sequences]

previous contigF:007362 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AF384037_179414612962e-79184-67813-177+1453Zea mays nucleosome/chromatin assembly factor C (nfc102) mRNA, complete cds.
gb:AF250047_178084722962e-79184-67813-177+1453Zea mays WD-repeat protein RBAP1 (rbap1) mRNA, complete cds.
gb:AY100481_157694432962e-79184-67813-177+1453Zea mays nucleosome/chromatin assembly factor group C (nfc101) mRNA, complete cds.
sp|O22607|MSI4_ARATH42962e-7994-68137-231+1507WD-40 repeat protein MSI4.>pir|G84577|G84577 probable WD-40 repeat protein, MSI4 [imported] - Arabidopsis thaliana>gb:AY
gb:AC005917_153319652954e-79184-68116-181+1457Arabidopsis thaliana chromosome 2 clone F3P11 map CIC06E08, complete sequence.
gb:AX076396_146065062949e-79184-67813-177+1453Sequence 3 from Patent WO0104285.
gb:AF028711_176236672931e-78184-68116-181+1457Arabidopsis thaliana WD-40 repeat protein MSI4 (MSI4) mRNA, complete cds.
gb:AF250048_178084882923e-78184-67813-177+1182Zea mays WD-repeat protein RBAP2 (rbap2) gene, partial cds.
gb:AP002901_182373592824e-75184-67812-176+1453Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456F08.
gb:AJ631221_1812780102816e-75184-6758-171+1458Silene diclinis partial mRNA for putative WD repeat protein.
gb:AJ631218_1812777112816e-75184-6758-171+1458Silene dioica partial mRNA for putative WD repeat protein.>gb:AJ631219_1812778 Silene dioica partial mRNA for putative W
gb:SLA310656_1715246122816e-75184-67517-180+1473Silene latifolia partial wdr1x gene for putative WD-repeat protein exons 1-15.
gb:SLA18519_1715241132816e-75184-67516-179+1472Silene latifolia mRNA for X1 protein.
gb:SLA18517_1715239142793e-74184-67516-179+1472Silene latifolia mRNA for Y1 protein.
gb:AJ631222_1812781152788e-74184-6758-171+1458Silene noctiflora partial mRNA for putative WD repeat protein.
gb:AF250049_1780849162618e-69184-6781-165+1168Zea mays WD-repeat protein RBAP3 (rbap3) mRNA, partial cds.
pir|T09936|T09936172386e-62184-68156-220+1496hypothetical protein T16L4.240 - Arabidopsis thaliana>gb:ATCHRIV71_1546894 Arabidopsis thaliana DNA chromosome 4, contig
gb:BT010610_1640556182332e-60184-68156-211+1487Arabidopsis thaliana At4g29730 gene, complete cds.>gb:AK176425_1818413 Arabidopsis thaliana mRNA for WD-40 repeat-like p
gb:SLA18518_1715240192202e-56271-6751-135+1428Silene latifolia Y1 gene.
gb:SLA310655_1715245202155e-55271-6751-136+1429Silene latifolia partial wdr1y gene for putative WD-repeat protein exons 2-15.
gb:AY082378_1569178211241e-27454-6751-74+1321Silene conica SlX1-like protein mRNA, partial cds.
gb:AY084036_1569293221057e-22487-6751-63+1286Silene latifolia X1 protein gene, partial cds.>gb:AY084037_1569294 Silene latifolia Y1 protein gene, partial cds.>gb:AY0
gb:AY084042_1569299231032e-21487-6751-63+1286Silene flos-jovis XY1 protein gene, partial cds.
gb:AY084040_1569297241011e-20487-6751-63+1286Silene vulgaris XY1 protein gene, partial cds.
sp|O22466|MSI1_LYCES25935e-18184-64519-178+1424WD-40 repeat protein MSI1.>pir|T04324|T04324 G1/S transition control protein-binding protein MSI1 - tomato>gb:AF016845_1
sp|O22467|MSI1_ARATH26904e-17184-64519-178+1424WD-40 repeat protein MSI1.>gb:CQ887959_1454884 Sequence 37 from Patent WO2004085644.>gb:AB019228_1514097 Arabidopsis tha
gb:AF440219_180005027897e-17184-64525-184+1431Zea mays cultivar B73 MSI type nucleosome/chromatin assembly factor C (nfc103) mRNA, complete cds.
gb:AX076394_146064928872e-16184-64525-184+1431Sequence 1 from Patent WO0104285.
gb:BC042283_254810329834e-15184-64818-177+1425Xenopus laevis retinoblastoma binding protein 7, mRNA (cDNA clone MGC:53418 IMAGE:5571746), complete cds.
gb:BC088588_256571830835e-15184-64819-178+1425Xenopus tropicalis hypothetical LOC496866, mRNA (cDNA clone MGC:97809 IMAGE:6991409), complete cds.
gb:HSIEF9306_201437131835e-15184-64819-178+1410H.sapiens IEF 9306 mRNA.
gb:CQ887961_145488532835e-15184-64819-178+1425Sequence 39 from Patent WO2004085644.>gb:AF097750_2473289 Gallus gallus chromatin assembly factor 1 p48 subunit mRNA, co
sp|Q60972|RBB4_MOUSE33835e-15184-64819-178+1461Chromatin assembly factor 1 subunit C (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit)
sp|Q09028|RBB4_HUMAN34835e-15184-64819-178+1425Chromatin assembly factor 1 subunit C (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit)
gb:BC080146_256157735827e-15184-64818-177+1297Xenopus tropicalis hypothetical protein MGC76124, mRNA (cDNA clone MGC:89776 IMAGE:7027693), complete cds.
gb:BC067546_255472436827e-15184-64818-178+1448Danio rerio retinoblastoma binding protein 4, like, mRNA (cDNA clone MGC:85617 IMAGE:6524543), complete cds.
gb:BC064219_255377237827e-15184-64818-177+1425Xenopus tropicalis hypothetical protein MGC76124, mRNA (cDNA clone MGC:76124 IMAGE:5309101), complete cds.
gb:AF374376_118815538827e-15184-64824-181+1426Oikopleura dioica clone BAC clone 001, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces.
gb:BC072311_255656239829e-15184-64819-178+1425Xenopus laevis hypothetical protein MGC82618, mRNA (cDNA clone MGC:82618 IMAGE:5047944), complete cds.
gb:BC063984_255368440821e-14184-64819-178+1424Danio rerio retinoblastoma binding protein 4, mRNA (cDNA clone MGC:77854 IMAGE:7002322), complete cds.
gb:BC045315_254915941821e-14184-64819-178+1424Danio rerio retinoblastoma binding protein 4, mRNA (cDNA clone MGC:55349 IMAGE:2601332), complete cds.
gb:AY394940_253168342821e-14184-64819-178+1424Danio rerio clone RK046A1D12 retinoblastoma binding protein 4 mRNA, complete cds.
gb:BC052110_255045943811e-14184-64818-178+1426Danio rerio retinoblastoma binding protein 4, like, mRNA (cDNA clone MGC:56477 IMAGE:5776911), complete cds.
gb:CR857269_118151344812e-14184-64819-178+1463Pongo pygmaeus mRNA; cDNA DKFZp469A0122 (from clone DKFZp469A0122).
sp|Q24572|CAF1_DROME45803e-14184-64823-182+1430Chromatin assembly factor 1 P55 subunit (CAF-1 P55 subunit) (dCAF-1) (Nucleosome remodeling factor 55 kDa subunit) (NURF
gb:AE017347_175792046803e-14184-64827-191+1435Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence.
gb:BC077257_255997347791e-13184-64819-178+1425Xenopus laevis retinoblastoma A associated protein, mRNA (cDNA clone MGC:79922 IMAGE:4968802), complete cds.
gb:AL929302_193324948782e-13184-64862-221+1469Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open
gb:AL929302_193324849782e-13184-64813-172+1420Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open
sp|Q60973|RBB7_MOUSE50782e-13184-64818-177+1425Histone acetyltransferase type B subunit 2 (Retinoblastoma binding protein p46) (Retinoblastoma-binding protein 7) (RBBP
sp|Q16576|RBB7_HUMAN51782e-13184-64818-177+1425Histone acetyltransferase type B subunit 2 (Retinoblastoma binding protein P46) (Retinoblastoma-binding protein 7) (RBBP
gb:AF073787_247172152772e-13184-64819-178+1425Xenopus laevis retinoblastoma A associated protein mRNA, complete cds.
gb:AY088045_157306953772e-13184-64816-169+1415Arabidopsis thaliana clone 40637 mRNA, complete sequence.
gb:AK078349_117228254772e-13184-64818-177+1425Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:6530404A07 product:hypothetical
sp|O22468|MSI2_ARATH55772e-13184-64816-169+1415WD-40 repeat protein MSI2.>pir|B84544|B84544 probable WD-40 repeat protein, MSI2 [imported] - Arabidopsis thaliana>gb:AC
gb:AF297468_125995556773e-13184-64819-177+1308Schistosoma mansoni strain NMRI chromatin assembly factor 1 small subunit-like protein (RBAP48) mRNA, complete cds.
gb:CQ887965_145488757774e-13184-63368-222+1222Sequence 43 from Patent WO2004085644.
gb:CR380948_164935358765e-13184-56732-162+1419Candida glabrata strain CBS138 chromosome B complete sequence.
gb:CR860642_118470159765e-13184-64818-177+1426Pongo pygmaeus mRNA; cDNA DKFZp459K2224 (from clone DKFZp459K2224).
gb:AF279275_248401860758e-13184-64818-176+1424Gallus gallus Rbap46 polypeptide mRNA, complete cds.
gb:CNS07EGE_137366261758e-13184-64513-158+1384chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora).
pir|JC7558|JC755862758e-13184-64818-176+1424chromatin assembly factor-1 p48 subunit homolog, p46 - chicken
pir|T38386|T3838663751e-12184-64822-183+1408hypothetical wd-40 repeat protein - fission yeast (Schizosaccharomyces pombe)>gb:SPAC25H1_1717435 S.pombe chromosome I c
gb:CR382124_165637164743e-12184-68115-180+1408Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:AP006149_186095965727e-12136-6781-172+1410Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11.
pir|T23391|T2339166705e-11184-56716-149+1417hypothetical protein K07A1.12 - Caenorhabditis elegans>gb:AF116530_1242527 Caenorhabditis elegans synthetic multivulva p
gb:AF016848_176151667696e-11184-64817-170+1424Arabidopsis thaliana WD-40 repeat protein (MSI3) mRNA, complete cds.
sp|O22469|MSI3_ARATH68696e-11184-64817-170+1424WD-40 repeat protein MSI3.>pir|T05775|T05775 G1/S transition control protein-binding protein MSI3 - Arabidopsis thaliana
gb:AY093418_157534869672e-10184-5642-124+1382Zea mays nucleosome/chromatin assembly factor 104 (nfc104) mRNA, complete cds.
gb:BT002870_163646170674e-10184-64817-170+1424Arabidopsis thaliana clone RAFL14-87-D13 (R20340) putative WD-40 repeat protein (MSI3) (At4g35050) mRNA, complete cds.
sp|P90917|RBA1_CAEEL71658e-10199-64217-170+1412Trp-Asp repeats containing protein RBA-1.>pir|T23385|T23385 hypothetical protein K07A1.11 - Caenorhabditis elegans>gb:CE
pir|T41054|T4105472627e-09184-64528-182+1430probable chromosome assembly factor, beta transducin - fission yeast (Schizosaccharomyces pombe)>gb:SPCC1672_1720982 S.p
sp|P39984|HAT2_YEAST73598e-08184-56412-146+1401Histone acetyltransferase type B subunit 2 (EC 2.3.1.48).>pir|S50533|S50533 hypothetical protein YEL056w - yeast (Saccha
gb:CR382125_165827774573e-07184-58822-166+1417Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:AE016818_174789975574e-07184-61523-177+1417Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence.
sp|P90916|RBA2_CAEEL76551e-06241-5673-117+1385Trp-Asp repeats containing protein RBA-2.
gb:AE016816_174670877551e-06184-67846-196+1423Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence.
gb:PFMAL1P2_139436278551e-06187-59746-188+1446Plasmodium falciparum DNA from MAL1P2.
sp|P13712|MSI1_YEAST79542e-06184-56721-158+1422Chromatin assembly factor 1 P50 subunit (CAF-1 P50 subunit) (MSI1 protein) (IRA1 multicopy suppressor).>pir|S07865|BVBYM
gb:BC015123_197496280536e-06316-6485-118+1365Homo sapiens, Similar to retinoblastoma-binding protein 4, clone IMAGE:3686783, mRNA, partial cds.
gb:AC147427_174470381521e-05442-645304-369+1615Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence.
gb:CR380959_165387882504e-05187-56724-160+1419Candida glabrata strain CBS138 chromosome M complete sequence.
gb:AL929302_193325283505e-05469-64840-97+1285Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open
gb:CR382128_166090084505e-05184-58229-168+1409Yarrowia lipolytica chromosome B of strain CLIB99 of Yarrowia lipolytica.
gb:CR382138_167103485496e-05190-56746-204+1472Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii.
gb:CR382139_167274886482e-04184-59729-174+1460Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii.
gb:CR382138_167184287482e-04184-57023-150+1415Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii.
gb:PFMAL13_119134288450.001184-64539-203+1582Plasmodium falciparum 3D7 chromosome 13, *** SEQUENCING IN PROGRESS ***, 33 ordered pieces.
pir|A84578|A8457889440.002403-585135-194+1469probable WD-40 repeat protein [imported] - Arabidopsis thaliana>gb:AC005917_1533198 Arabidopsis thaliana chromosome 2 cl
gb:AF470350_180288190430.006433-603169-224+1489Tortula ruralis WD40 mRNA, complete cds.
sp|O14021|PRW1_SCHPO91410.022184-57628-162+1431RbAp48-related WD40-repeat protein prw1.>pir|T38471|T38471 probable chromatin assembly factor - fission yeast (Schizosa
gb:AX973062_148837192400.038184-28819-53+155Sequence 3865 from Patent EP1104808.
gb:AY167751_158630793390.085427-6489-79+1124Capsella rubella putative WD-40 repeat protein (MSI2) gene, partial cds, alternatively spliced.>gb:AY167752_1586308 Caps
gb:AC132492_174122094390.11316-56485-166+1268Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence.>gb:AC135418_1742219 Oryza sativa
gb:AY167751_158630695380.19370-6488-89+1134Capsella rubella putative WD-40 repeat protein (MSI2) gene, partial cds, alternatively spliced.>gb:AY167753_1586309 Caps
gb:BC086398_210958596360.7217-17542-105+2346Rattus norvegicus CSX-associated LIM, mRNA (cDNA clone MGC:105665 IMAGE:7303205), complete cds.
gb:AP004155_183831497342.1528-64454-92-1204Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_D12.
gb:AF140359_205609298342.7454-64872-132+1472Rattus norvegicus coronin relative protein mRNA, complete cds.
gb:CR380954_165109099342.7475-621386-434+1513Candida glabrata strain CBS138 chromosome H complete sequence.
gb:MMGT10_2115108100333.617-17542-105+2194M.musculus En-2/lacZ junction mRNA (Gt10).
gb:BC004777_2089782101333.617-17542-105+2375Mus musculus RIKEN cDNA 2410043F08 gene, mRNA (cDNA clone MGC:7174 IMAGE:3257486), complete cds.
gb:AL607072_2071483102333.6475-64880-132+1472Mouse DNA sequence from clone RP23-81E16 on chromosome 11 Contains the 3' end of the Ssh2 gene for slingshot homolog 2 (
gb:AF513359_2067280103333.617-17542-105+2375Mus musculus CSX-associated LIM (Cal) mRNA, complete cds.
gb:AB070896_2047413104333.6475-64880-132+1431Mus musculus mRNA for clipin E/coronin 6 type C, complete cds.>gb:AL607072_2071485 Mouse DNA sequence from clone RP23-81
gb:AB070895_2047412105333.6475-64880-132+1471Mus musculus mRNA for clipin E/coronin 6 type B, complete cds.>gb:AL607072_2071484 Mouse DNA sequence from clone RP23-81
gb:AB070894_2047411106333.6475-64880-132+1471Mus musculus mRNA for clipin E/coronin 6 type A, complete cds.>gb:AL607072_2071482 Mouse DNA sequence from clone RP23-81
pir|A38203|A38203107333.617-17542-105+2194proline-rich protein - mouse (fragment)
gb:AE016816_1746827108336.1475-681239-293+1425Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence.
gb:AC116984_1207372109336.1451-675147-224+1290Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.
gb:AP003896_1834939110328.0454-603205-265+1466Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04.
pir|T39719|T39719111328.0475-630314-367+1435beta transducin - fission yeast (Schizosaccharomyces pombe)>gb:SPBC17D11_1719324 S.pombe chromosome II cosmid c17D11.