Clone JMSF030G17 [sequences]

previous contigF: contigR:009271
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AY085262_157033411341e-30236-694158-317-1338Arabidopsis thaliana clone 142094 mRNA, complete sequence.
gb:AY055093_156335421341e-30236-694158-317-1338Arabidopsis thaliana At1g54460/F20D21_28 mRNA, complete cds.>gb:AF361626_1791372 Arabidopsis thaliana At1g54460/F20D21_2
gb:AC104321_173755231272e-28236-694209-359-1359Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence.
gb:AB118003_152780741272e-28236-694115-265-1265Oryza sativa (japonica cultivar-group) bip116 mRNA for BRI1-KD interacting protein 116, partial cds.
gb:AP003753_183289951202e-26293-694196-334-1366Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_B08.
gb:AK117325_181536561142e-24236-691120-280-1286Arabidopsis thaliana At3g04630 mRNA for unknown protein, complete cds, clone: RAFL16-89-H09.
gb:AF548461_181073271142e-24338-69480-200-1202Arabidopsis thaliana WAVE-DAMPENED2 (WVD2) gene, complete cds.
gb:ATAC011437_154327581142e-24236-691125-285-1291Arabidopsis thaliana chromosome III BAC F7O18 genomic sequence, complete sequence.
gb:AY087930_157295591133e-24236-691121-281-1287Arabidopsis thaliana clone 39706 mRNA, complete sequence.
pir|E96586|E96586101134e-24236-649114-258-1279hypothetical protein F20D21.28 [imported] - Arabidopsis thaliana>gb:AE005173_893345 Arabidopsis thaliana chromosome 1, b
gb:AY208876_1589625111073e-22206-685113-264-1267Brassica napus seed specific protein Bn15D14A mRNA, partial cds.
gb:BT003083_1636665121002e-20407-694187-282-1338Arabidopsis thaliana At3g23090 gene, complete cds.
gb:AB026655_1517328131002e-20407-694223-318-1374Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXC7.
gb:AP005446_185190914927e-18137-667198-358-1372Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0029C06.
gb:AP004869_184629915865e-1698-670190-374-1395Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419A09.
gb:AB118005_152780916865e-1698-670129-313-1334Oryza sativa (japonica cultivar-group) bip118 mRNA for BRI1-KD interacting protein 118, partial cds.
pir|H84648|H8464817843e-1586-670184-380-1404hypothetical protein At2g25480 [imported] - Arabidopsis thaliana>gb:AC006300_1534038 Arabidopsis thaliana chromosome 2 c
gb:AC007017_153496518834e-15125-670247-422-1432Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete sequence.>gb:AY057620_1564033 Arabidopsis thaliana At
pir|B84774|B8477419834e-15125-670254-429-1439hypothetical protein At2g35880 [imported] - Arabidopsis thaliana
gb:AY035182_155994920796e-14107-670208-390-1437Arabidopsis thaliana unknown protein (At4g32330) mRNA, complete cds.>gb:AY113894_1578305 Arabidopsis thaliana unknown pr
gb:AK176599_181858721659e-10476-667330-393-1478Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-12-J16.
pir|H96733|H9673322659e-10476-667269-332-1417hypothetical protein F15H11.15 [imported] - Arabidopsis thaliana>gb:AE005173_894674 Arabidopsis thaliana chromosome 1, b
gb:AP005446_185191023627e-09137-5713-131-1145Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0029C06.
pir|T05343|T0534324534e-06479-670250-327-1423hypothetical protein F8B4.30 - Arabidopsis thaliana>gb:ATCHRIV77_1547153 Arabidopsis thaliana DNA chromosome 4, contig f
pir|T05396|T0539625534e-06479-670250-327-1423hypothetical protein F10M6.40 - Arabidopsis thaliana>gb:ATF10M6_1548190 Arabidopsis thaliana DNA chromosome 4, BAC clone
pir|C86168|C8616826430.005416-631646-714-1743hypothetical protein [imported] - Arabidopsis thaliana>gb:AE005172_889397 Arabidopsis thaliana chromosome 1, top arm com
gb:AK175714_181770227430.006479-664116-171-1185Arabidopsis thaliana mRNA, partial cds, clone: RAFL22-25-I16.
pir|T51529|T5152928430.006488-691378-442-1494hypothetical protein T20K14_120 - Arabidopsis thaliana>gb:ATT20K14_1554991 Arabidopsis thaliana DNA chromosome 5, BAC cl
gb:AY735598_162564029420.010488-691368-435-1488Arabidopsis thaliana hypothetical protein AT3G01015 mRNA, complete cds.
gb:AC067753_154031130420.010488-691368-435-1488Arabidopsis thaliana chromosome 3 BAC TEL3N genomic sequence, complete sequence.
gb:AY596297_63376731410.018113-346214-286-1403Haloarcula marismortui ATCC 43049 chromosome I, complete sequence.
gb:BC068637_255514232410.023398-658634-716-1716Xenopus laevis targeting protein for Xklp2, mRNA (cDNA clone MGC:79885 IMAGE:6636542), complete cds.
gb:AX037639_145767533410.023398-658633-715-1715Sequence 1 from Patent WO0060071.>gb:AF244546_2482222 Xenopus laevis targeting protein for Xklp2 (TPX2) mRNA, complete c
gb:AB101006_246497134400.051398-691646-739-1739Gallus gallus mRNA for restricted expression proliferation associated protein-100, complete cds.
gb:BC077396_256010735390.067398-658633-715-1715Xenopus laevis MGC81694 protein, mRNA (cDNA clone MGC:81694 IMAGE:6864858), complete cds.
gb:BC073328_255717336390.1159-439621-742-1848Xenopus laevis nucleolar phosphoprotein, mRNA (cDNA clone MGC:80737 IMAGE:5512141), complete cds.
gb:BC041236_254787137390.1159-439685-806-1878Xenopus laevis nucleolar phosphoprotein, mRNA (cDNA clone IMAGE:4684134), partial cds.
gb:AE017349_175888038390.11485-688603-673-1678Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence.
gb:BX571856_78003139370.2544-41224-142-1906Staphylococcus aureus subsp. aureus strain MRSA252, complete genome.
gb:CEF49E2_136419740360.5792-613148-326-1845Caenorhabditis elegans cosmid F49E2, complete sequence.
gb:CEF49E2_136419641360.5792-613148-326-11030Caenorhabditis elegans cosmid F49E2, complete sequence.
gb:CEF49E2_136419542360.5792-613148-326-1889Caenorhabditis elegans cosmid F49E2, complete sequence.
gb:CEF49E2_136419443360.5792-613148-326-11215Caenorhabditis elegans cosmid F49E2, complete sequence.
pir|AI2045|AI204544360.57101-331439-524-1546serine/threonine kinase [imported] - Nostoc sp. (strain PCC 7120)>gb:BA000019_682908 Nostoc sp. PCC 7120 DNA, complete g
pir|T22457|T2245745360.5792-613148-326-1904hypothetical protein F49E2.5d - Caenorhabditis elegans
pir|T22458|T2245846360.5792-613148-326-11230hypothetical protein F49E2.5a - Caenorhabditis elegans
pir|I51618|I5161847360.5798-439685-793-1990nucleolar phosphoprotein - African clawed frog>gb:XLNOPP180_2582986 X.laevis mRNA for xNopp180.
pir|T22456|T2245648360.5792-613148-326-1611hypothetical protein F49E2.5f - Caenorhabditis elegans>gb:CEF49E2_1364199 Caenorhabditis elegans cosmid F49E2, complete
pir|T22455|T2245549360.5792-613148-326-1581hypothetical protein F49E2.5e - Caenorhabditis elegans>gb:CEF49E2_1364201 Caenorhabditis elegans cosmid F49E2, complete
gb:CEF49E2_136420050360.74125-613148-315-1528Caenorhabditis elegans cosmid F49E2, complete sequence.
gb:CR858098_118228551360.74512-646188-232-1488Pongo pygmaeus mRNA; cDNA DKFZp459K1530 (from clone DKFZp459K1530).
gb:BC082643_256279152350.9783-664214-386-1552Xenopus laevis hypothetical LOC494666, mRNA (cDNA clone MGC:81585 IMAGE:6863429), complete cds.
gb:BX883050_211150553350.97512-646188-232-1488Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHs
gb:BC031540_209714354350.97512-646188-232-1496Mus musculus tripartite motif protein 39, mRNA (cDNA clone MGC:19239 IMAGE:3666785), complete cds.
gb:AK053507_117045755350.97512-646188-232-1264Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130103K13 product:ring finger protei
sp|Q9ESN2|RN23_MOUSE56350.97512-646188-232-1488RING finger protein 23 (Testis-abundant finger protein) (Tripartite motif-containing protein 39).>gb:AB046382_2046041 Mu
gb:SPU92792_172227357351.3233-6467-133-1561Schizosaccharomyces pombe general transcriptional repressor Tup1 (tup1) mRNA, partial cds.
gb:CR382129_166223358351.359-31923-101-1780Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica.
gb:AB158488_141096259351.3512-646188-232-1488Sus scrofa TRIM39, FLJ22638, GNL1, CAT56 genes, SLA-11 pseudogene, complete cds.
sp|Q9UUG8|TU12_SCHPO60351.3233-64632-158-1586Transcriptional repressor tup12.>pir|T38992|T38992 WD-40 repeat regulatory protein tup1 - fission yeast (Schizosaccharo
gb:AF320757_223434461351.792-325675-751-1762Simian cytomegalovirus basic phosphoprotein UL32 (UL32) gene, complete cds.
gb:BT007627_215055962351.7512-646188-232-1489Synthetic construct Homo sapiens tripartite motif-containing 39 mRNA, partial cds.
gb:AB110938_187366763351.7512-646188-232-1518Homo sapiens TRIM39 gene for TRIM39 protein, complete cds, cell_line: LKT3.>gb:AL662795_1931414 Human DNA sequence from
gb:AB110937_187366664351.7512-646188-232-1518Homo sapiens TRIM39 gene for TRIM39 protein, complete cds, cell_line: AKIBA.
gb:AX776007_147529565351.7512-646188-232-1488Sequence 277 from Patent WO03048202.>gb:AL662795_1931415 Human DNA sequence from clone XXbac-283O16 on chromosome 6 cont
gb:AF346625_141871366351.7113-694753-942-11135Canis familiaris heavy neurofilament protein (NFH) mRNA, NFH-C allele, complete cds.
sp|Q9HCM9|RN23_HUMAN67351.7512-646188-232-1518RING finger protein 23 (Testis-abundant finger protein) (Tripartite motif-containing protein 39).>pir|JC7387|JC7387 test
gb:AE016818_174812668342.295-313273-344-11458Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence.
gb:RABDNAA_144367769342.280-694209-442-1606Rabbit neurofilament-H mRNA, 5' end of cds.
gb:AF067776_47558370342.2116-36776-159-12055Abiotrophia defectiva extracellular matrix binding protein (emb) gene, partial cds.
pir|T31110|T3111071342.2116-36776-159-12055extracellular matrix binding protein - Abiotrophia defectiva (fragment)
pir|A43427|A4342772342.280-694209-442-1606neurofilament triplet H1 protein - rabbit (fragment)
gb:CR382129_166197473342.883-334797-878-11588Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica.
gb:AB052705_765374342.8155-32865-122-11296Streptococcus downei dex gene for dextranase, complete cds.
sp|P20811|ICAL_BOVIN75342.8113-301183-245-1705Calpain inhibitor (Calpastatin).>gb:BOVCPTTNA_1435352 Bos taurus calpastatin mRNA, complete cds.
gb:AY164486_207739976333.7128-256560-599-12151Mus musculus polycystic kidney disease 1-like 3 (Pkd1l3) mRNA, complete cds.
gb:CEF49E2_136419877333.7119-613148-323-1947Caenorhabditis elegans cosmid F49E2, complete sequence.
gb:AE008692_24093178333.7113-4361112-1217-11217Zymomonas mobilis subsp. mobilis ZM4, complete genome.
pir|T22459|T2245979333.7119-613148-323-1962hypothetical protein F49E2.5b - Caenorhabditis elegans
sp|Q10607|RHO_MYCTU80333.798-30741-120-1602Transcription termination factor rho homolog.>pir|E70773|E70773 probable rho protein - Mycobacterium tuberculosis (strai
gb:AY094614_193637281334.871-412809-933-11265Homo sapiens tripin (TRIPIN) mRNA, complete cds.
gb:AK057940_191216582334.871-412112-236-1568Homo sapiens cDNA FLJ25211 fis, clone REC08060.
gb:AF510221_180717783334.895-27453-119-1346Saccharomyces cerevisiae cell wall protein (SED1) gene, SED1-2 allele, complete cds.
gb:AE017342_175469384334.8101-565568-739-1936Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence.
gb:T10F20_172332285334.8158-421155-248-1654Sequence of BAC T10F20 from Arabidopsis thaliana chromosome 1, complete sequence.
gb:AE005172_89078386334.8158-421155-248-1635Arabidopsis thaliana chromosome 1, top arm complete sequence.>gb:AC069551_1540957 Genomic sequence for Arabidopsis thali
gb:AY352075_61191687334.8101-298271-336-1469Listeria innocua strain JI023 invasion-associated protein p60 (iap) gene, complete cds.
gb:AY352074_61191588334.8101-298271-336-1469Listeria innocua strain JI155 invasion-associated protein p60 (iap) gene, complete cds.
gb:AF532224_51958389334.8101-298271-336-1471Listeria innocua strain IMVW620 invasion associated protein p60 (iap) gene, complete cds.
pir|S51364|S5136490334.8533-664955-997-11390sperm tail-specific protein mst101(2) - fruit fly (Drosophila hydei)
pir|T06029|T0602991334.8104-613308-481-1532hypothetical protein T28I19.100 - Arabidopsis thaliana>gb:ATCHRIV88_1547736 Arabidopsis thaliana DNA chromosome 4, conti
pir|E85343|E8534392334.8200-3401002-1047-11071hypothetical protein AT4g29440 [imported] - Arabidopsis thaliana>gb:ATCHRIV71_1546865 Arabidopsis thaliana DNA chromosom
sp|Q08696|MST2_DROHY93334.8533-664956-998-11391Axoneme-associated protein mst101(2).>gb:DHMST1012_1377671 D.hydei Dhmst101 (2) gene.
gb:AY186194_230710594336.398-32283-150-1356Rhesus cytomegalovirus strain 68-1, complete genome.
gb:BC060619_210409795336.3488-652666-720-1745Mus musculus TPX2, microtubule-associated protein homolog (Xenopus laevis), mRNA (cDNA clone MGC:79188 IMAGE:6812536), c
gb:AY738135_134895596336.3149-29236-83-1219Tegenaria saeva orthodenticle protein mRNA, partial cds.
gb:AK090101_117614397336.3488-652666-720-1745Mus musculus skin RCB-1283 B16 melanoma cDNA, RIKEN full-length enriched library, clone:G430124K07 product:similar to RE
gb:AK011311_115632398336.3488-652616-670-1695Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610005B21 product:similar to RES
gb:AE014298_112537299336.3101-673603-800-11545Drosophila melanogaster chromosome X, complete sequence.>gb:AE003489_1212381 Drosophila melanogaster chromosome X, secti
gb:BX571661_778955100336.3389-664320-412-1479Wolinella succinogenes, complete genome; segment 5/7.
gb:BA000040_728416101336.3155-41521-103-1328Bradyrhizobium japonicum USDA 110 DNA, complete genome.
gb:AY729926_644292102336.3101-298271-336-1463Listeria innocua strain LS-126 invasion-associated protein p60 (iap) gene, complete cds.
gb:AY729923_644289103336.3101-298275-340-1475Listeria innocua strain LS-007 invasion-associated protein p60 (iap) gene, complete cds.
gb:AY729922_644288104336.3101-298271-336-1471Listeria innocua invasion-associated protein p60 (iap) gene, complete cds.
gb:AF532296_519655105336.3101-298271-336-1471Listeria innocua strain TUMLis4 invasion associated protein p60 (iap) gene, complete cds.
gb:AF532275_519634106336.3101-298271-336-1473Listeria innocua strain IMVW127 invasion associated protein p60 (iap) gene, complete cds.
gb:AF532256_519615107336.3101-298271-336-1469Listeria innocua strain TUMLis3 invasion associated protein p60 (iap) gene, complete cds.
gb:AF532245_519604108336.3101-298271-336-1469Listeria innocua strain TUMLis2 invasion associated protein p60 (iap) gene, complete cds.
gb:LISIAPRELA_140558109336.3101-298271-336-1481Listeria innocua extracellular protein homologue (iap) gene, complete cds.
pir|AG1506|AG1506110336.3101-298269-334-1465P60 extracellular protein, invasion associated protein Iap [imported] - Listeria innocua (strain Clip11262)>gb:AL596165_
sp|Q9X3X7|TOP1_ZYMMO111336.3113-4361112-1217-11217DNA topoisomerase I (EC 5.99.1.2) (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase).>gb:AF088896_478305
sp|Q01836|P60_LISIN112336.3101-298271-336-1467Protein p60 precursor (Invasion-associated protein).>gb:AY729924_644290 Listeria innocua invasion-associated protein p60
gb:AF451898_2258125113328.292-2981033-1095-11585Heliothis zea virus 1, complete genome.
gb:AP004886_1846652114328.2302-406163-197-1300Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0576F08.
gb:CR382137_1670054115328.2122-41865-169-1514Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii.
gb:AE014187_939110116328.2107-436671-784-12104Plasmodium falciparum 3D7 chromosome 14 complete sequence.>gb:AE014826_1228186 Plasmodium falciparum 3D7 chromosome 14 s
gb:AY729920_644286117328.2101-298271-336-1471Listeria innocua strain LS-027 invasion-associated protein p60 (iap) gene, complete cds.
gb:AY729917_644283118328.2101-298271-336-1471Listeria innocua strain LS-054 invasion-associated protein p60 (iap) gene, complete cds.>gb:AY729918_644284 Listeria inn
gb:LISIAPD_140557119328.2101-29828-93-1164Listeria innocua iap-related gene, partial cds.
gb:AB120419_14713120328.292-613975-1137-12002Helicobacter pylori genes for cag pathogenicity island protein, complete cds, strain:F32.
pir|T05242|T05242121328.262-32827-123-1449hypothetical protein F18A5.120 - Arabidopsis thaliana>gb:ATCHRIV37_1545137 Arabidopsis thaliana DNA chromosome 4, contig
pir|T21193|MWKW1122328.292-652848-1015-11938myosin heavy chain D [similarity] - Caenorhabditis elegans>gb:CEF21C3_1362749 Caenorhabditis elegans cosmid F21C3, compl
sp|P02567|MYSD_CAEEL123328.292-652848-1015-11938Myosin heavy chain D (MHC D).>gb:CEMYO1_1366359 Caenorhabditis elegans myo-1 gene for myosin heavy chain.
sp|P51892|DNL1_XENLA124328.2110-29582-136-11070DNA ligase I (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP]).>pir|JC4852|JC4852 DNA ligase (ATP) (EC 6.5.1.1) I -