Clone JMSF030F16 [sequences]

previous contigF:007561 contigR:012711
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
sp|Q8L4F8|RPO3_NICSY12641e-6934-687137-354+151633e-39506-772889-977-2977DNA-directed RNA polymerase 3, chloroplast precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RNA polymerase 3
gb:NTA416570_169139522592e-6834-687136-353+131642e-39506-772889-977-2977Nicotiana tabacum mRNA for chloroplast RNA polymerase, rpoT3-tom gene.
sp|O24600|RPOT_ARATH32055e-5210-687148-369+1231529e-36506-772905-993-2993DNA-directed RNA polymerase, chloroplast precursor (EC 2.7.7.6).>pir|G84632|G84632 hypothetical protein At2g24120 [impor
gb:NSY302018_169122351902e-4740-687165-381+141642e-39506-772914-1002-21002Nicotiana tabacum mRNA for phage-type RNA polymerase (rpoT1-tom gene).
gb:NSY416568_169123041911e-4740-687165-381+181603e-38506-772914-1002-21002Nicotiana sylvestris mRNA for mitochondrial RNA polymerase (rpoT1 gene).
sp|Q93Y94|RPO1_NICSY61902e-4740-687165-381+1101603e-38506-772914-1002-21002DNA-directed RNA polymerase 1, mitochondrial precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RNA polymerase
gb:AB058954_1521739101863e-4640-687165-381+191603e-38506-772914-1002-21002Nicotiana sylvestris NsRpoT-A mRNA for T7 bacteriophage-type single subunit RNA polymerase, complete cds.
gb:NSY302019_1691224111856e-4640-684181-396+1121589e-38506-772932-1020-21020Nicotiana sylvestris mRNA for phage-type RNA polymerase (rpoT2 gene).
gb:NTA416569_169139491863e-4640-684182-397+1161572e-37506-772933-1021-21021Nicotiana tabacum mRNA for mitochondrial and chloroplast RNA polymerase (rpoT2-tom gene).
sp|Q8VWF8|RPO2_NICSY121856e-4640-684181-396+1131589e-38506-772932-1020-21020DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RN
gb:AB096014_152544281872e-4637-687175-394+1181542e-36506-772929-1017-21017Oryza sativa (japonica cultivar-group) rpoT1 mRNA for RpoT1, complete cds.>gb:AB120431_1527962 Oryza sativa (japonica cu
gb:AJ586899_1811851131841e-4537-68722-241+1141572e-37506-772774-862-2862Hordeum vulgare partial mitochondrial mRNA for RNA polymerase (rpoTm gene).
gb:AF091838_1767461141818e-4537-687164-383+1151572e-37506-772917-1005-21005Triticum aestivum single-subunit RNA polymerase G mRNA, complete cds; mitochondrial gene for mitochondrial product.
gb:CARNAPOLY_1645457201711e-4140-687150-363+161602e-38506-772900-988-2988C.album mRNA for mitochondrial single-subunit DNA-dependent RNA polymerase.
gb:AF127021_1770499171756e-4337-687133-352+1221529e-36506-772887-975-2975Zea mays T7-like RNA polymerase (rpoT1) mRNA, nuclear gene encoding mitochondrial protein, complete cds.
sp|P92969|RPOM_ARATH191711e-4140-687131-353+1171541e-36506-772888-976-2976DNA-directed RNA polymerase, mitochondrial precursor (EC 2.7.7.6).>pir|D96714|D96714 DNA-directed RNA polymerase [import
gb:ATY08137_1557458181711e-4140-687131-353+1191542e-36506-772888-976-2976Arabidopsis thaliana mRNA for mitochondrial single-subunit DNA-dependent RNA polymerase.
gb:ATRNAPOL_1554072151765e-4334-678171-386+1301496e-35506-772923-1011-21011Arabidopsis thaliana DNA-directed RNA polymerase gene.
pir|T51399|T51399161765e-4334-678171-386+1311496e-35506-772923-1011-21011DNA-directed RNA polymerase, mitochondrial - Arabidopsis thaliana>gb:ATF14F8_1548560 Arabidopsis thaliana DNA chromosome
gb:AF127022_1770500211671e-4034-687114-329+1201533e-36506-772864-952-2952Zea mays T7-like RNA polymerase (rpoT2) mRNA, nuclear gene encoding chloroplast protein, complete cds.
pir|T02751|T02751241671e-4034-687114-329+1211533e-36506-772864-952-2952DNA-directed RNA polymerase (EC 2.7.7.6) - maize>gb:ZMA005343_1731416 Zea mays Ama gene encoding single-subunit RNA poly
gb:HVU507396_1682788221671e-401-68797-325+1271496e-35506-772860-948-2948Hordeum vulgare subsp. vulgare mRNA for DNA-directed RNA polymerase, chloroplast precursor (rpoT gene).
gb:AB096015_1525443251664e-401-687104-330+1251503e-35506-772865-953-2953Oryza sativa (japonica cultivar-group) rpoT2 mRNA for RpoT2, complete cds.>gb:AB120430_1527961 Oryza sativa (japonica cu
gb:HVU507395_1682787231671e-401-68797-325+1281496e-35506-772860-948-2948Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19.
gb:TAU34402_1724707261603e-381-68798-326+1261496e-35506-772861-949-2949Triticum aestivum single-subunit RNA polymerase C mRNA, complete cds.
gb:AP005453_1852087271464e-34130-6871-183+1241503e-35506-772718-806-2806Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04.
gb:PPA416855_1701221281426e-331-687196-440+1371329e-30506-772977-1065-21065Physcomitrella patens rpoT2 gene for RNA polymerase, exons 1-20.
gb:AB055215_1521434291426e-331-687196-440+1381329e-30506-772977-1065-21065Physcomitrella patens rpoT2 mRNA for single-subunit RNA polymerase, complete cds.
gb:PPA416854_1701220301288e-297-684212-460+1351394e-32506-772999-1087-21087Physcomitrella patens rpoT1 gene for RNA polymerase, exons 1-19.
gb:AB055214_1521433311288e-297-684212-460+1361394e-32506-772999-1087-21087Physcomitrella patens rpoT1 mRNA for single-subunit RNA polymerase, complete cds.
gb:NTA416571_169139634821e-14415-6872-94+121642e-39506-772627-715-2715Nicotiana tabacum partial nictaRpoT1-tom gene for mitochondrial RNA polymerase, exons 2-19.
gb:AP005550_185393271872e-4637-687175-394+1951Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1058_F03.>gb:AP005729_1856727 Oryza sativa
gb:NTA416575_169140011642e-39506-772469-557-2557Nicotiana tabacum partial nictaRpoT3-tom gene for plastid RNA polymerase, exons 7-20.
gb:NTA416572_169139771603e-38506-77285-173-2173Nicotiana tabacum partial nictaRpoT1-syl gene for mitochondrial RNA polymerase, exons 15-19.
gb:NTA416574_1691399111589e-38506-772244-332-2332Nicotiana tabacum partial nictaRpoT2-syl gene for mitochondrial and plastid RNA polymerase, exons 9-19.
gb:HVT7T3RNA_1682536291496e-35506-77241-129-2129H.vulgare mRNA for putative T7/T3-like RNA polymerase, partial.
pir|T06188|T06188321496e-35506-77241-129-2129probable DNA-directed RNA polymerase (EC 2.7.7.6) - barley (fragment)
gb:OST3T7RNA_1698383331425e-33506-7661-87-287O.sativa mRNA for putative T3/T7-like RNA polymerase, partial.
pir|T04123|T04123341425e-33506-7661-87-287probable DNA-directed RNA polymerase (EC 2.7.7.6) - rice (fragment)
gb:ATDDRNPOL_1548056321281e-2810-411148-282+1282Arabidopsis thaliana gene encoding DNA-directed RNA polymerase, exon 1.
gb:CR380957_165305440430.005157-660442-590+144844e-15587-7721144-1205-21326Candida glabrata strain CBS138 chromosome K complete sequence.
gb:CR382124_165655736467e-04202-660390-528+152768e-13587-7721082-1143-21263Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:AY081704_1568964331211e-2640-540131-303+1305Arabidopsis thaliana At1g68990/T6L1_17 mRNA, complete cds.
sp|P13433|RPOM_YEAST37440.002157-660462-614+156744e-12587-7721168-1229-21351DNA-directed RNA polymerase, mitochondrial precursor (EC 2.7.7.6).>gb:YSCRPLA_1730506 Yeast (S.cerevisiae) mitochondrion
pir|S56218|S5621838440.004157-660462-614+155744e-12587-7721168-1229-21351DNA-directed RNA polymerase (EC 2.7.7.6), mitochondrial - yeast (Saccharomyces cerevisiae)>gb:YSCCHRVIN_1728473 Saccharo
gb:AE016816_174691439430.005244-660438-561+159713e-11587-7721117-1178-21295Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence.
gb:AF361480_1265565391073e-22506-772862-950-2950Dictyostelium discoideum DNA-dependent RNA polymerase RpmA (rpmA) gene, complete cds; nuclear gene for mitochondrial pro
gb:CR382127_166000042370.33187-669456-601+161652e-09587-7721154-1214-21345Yarrowia lipolytica chromosome A of strain CLIB99 of Yarrowia lipolytica.
pir|B97504|B9750446334.8571-681181-217+160682e-10509-772772-862-2863RNA polymerase [imported] - Agrobacterium tumefaciens (strain C58, Cereon)>pir|AE2722|AE2722 DNA-directed RNA polymeras
sp|O13993|RPOM_SCHPO40942e-18506-7721006-1120-21120DNA-directed RNA polymerase, mitochondrial precursor (EC 2.7.7.6).>pir|T38431|T38431 DNA-directed RNA polymerase precurs
gb:AK085666_117455141851e-15506-7721100-1207-21207Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730004A08 pr
gb:AK053356_117040842851e-15506-7721100-1207-21207Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130011L04 product:similar to DNA-DIR
gb:AK003792_115207243851e-15506-772355-462-2462Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110018N15 product:similar to DNA-
gb:AF200705_247978445828e-15506-7721129-1235-21235Xenopus laevis RNA polymerase (mtRPO) mRNA, complete cds; nuclear gene for mitochondrial product.
gb:NTA416573_169139835804e-14412-6841-93+1562Nicotiana tabacum partial nictaRpoT2-tom gene for mitochondrial and plastid RNA polymerase, exons 2-14.
gb:AC004449_187457746803e-14506-7721130-1230-21230Homo sapiens chromosome 19, cosmid R33683, complete sequence.
sp|O00411|RPOM_HUMAN47803e-14506-7721130-1230-21230DNA-directed RNA polymerase, mitochondrial precursor (EC 2.7.7.6) (MTRPOL).>gb:HSU75370_2025972 Human mitochondrial RNA
gb:AY119551_130112048773e-13506-772136-244-2244Drosophila melanogaster GH27547 full insert cDNA.
gb:AF273674_125768949773e-13506-7721412-1503-21503Plasmodium falciparum DNA-dependent RNA polymerase (TRNAP) gene, complete cds; nuclear gene for probable mitochondrial p
gb:AE014134_112695950773e-13506-7721261-1369-21369Drosophila melanogaster chromosome 2L, complete sequence.>gb:AE003587_1216642 Drosophila melanogaster chromosome 2L, sec
gb:AE014186_93822751773e-13506-7721440-1531-21531Plasmodium falciparum 3D7 chromosome 11 complete sequence.>gb:AE014839_1228961 Plasmodium falciparum 3D7 chromosome 11 s
gb:CEY105E8A_136922153751e-12506-772840-944-2944Caenorhabditis elegans YAC Y105E8A, complete sequence.
gb:AF303582_126055054743e-12506-7721179-1274-21274Trypanosoma brucei RNA polymerase (MTRNAP) gene, complete cds, nuclear gene for mitochondrial product.
sp|P38671|RPOM_NEUCR57744e-12587-7721158-1219-21422DNA-directed RNA polymerase, mitochondrial precursor (EC 2.7.7.6).>pir|T18363|T18363 DNA-directed RNA polymerase (EC 2.7
gb:CR382136_166899058712e-11587-7721132-1193-21312Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii.
gb:AF542530_181010862642e-09599-7721000-1057-21202Cryptococcus neoformans var. neoformans strain JEC20 mating type a locus, complete sequence.
gb:AF542528_181004363642e-09599-7721000-1057-21202Cryptococcus neoformans var. grubii strain 125.91 mating type a locus, complete sequence.
gb:AE017344_175654064642e-09599-7721000-1057-21202Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence.
gb:AE017344_175653965642e-09599-7721000-1057-21180Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence.>gb:AF542531_1810150 Cryptococcus neoforma
gb:OSU34283_169843766642e-09683-772138-167-2167Oryza sativa putative T3/T7-like RNA polymerase mRNA, partial cds.
gb:AY710430_162393767642e-09599-7721000-1057-21180Cryptococcus gattii strain WM276 MATalpha locus, complete sequence.
gb:AY710429_162389868642e-09599-7721000-1057-21180Cryptococcus gattii strain E566 MATa locus, complete sequence.
gb:AY421967_160515069642e-09599-7721000-1057-21180Cryptococcus gattii strain ATCC 32609 MAT-alpha mating locus, fragment IV.
pir|T03237|T0323770642e-09683-772138-167-2167probable DNA-directed RNA polymerase (EC 2.7.7.6) - rice (fragment)
gb:AF542529_181008971635e-09599-7721000-1057-21180Cryptococcus neoformans var. grubii strain H99 mating type alpha locus, complete sequence.
gb:CR382138_167157172604e-08605-7691075-1129-21271Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii.
sp|P06221|RPOL_BPSP673543e-06509-772784-873-2874DNA-directed RNA polymerase (EC 2.7.7.6).>gb:NCSP6RNP_1506943 Bacteriophage SP6 gene for RNA polymerase.
gb:AY299121_149939874544e-06506-772662-746-2746Xanthomonas oryzae bacteriophage Xp10 genomic DNA, complete genome.
pir|S07380|S0738075544e-06509-772784-873-2874DNA-directed RNA polymerase (EC 2.7.7.6) - Salmonella phage SP6>gb:AY288927_1499322 Enterobacteria phage SP6, complete g
gb:BAC505558_150389976512e-05509-772733-815-2816Bacteriophage phiKMV complete genome.
gb:AY370674_150058777512e-05509-772785-874-2875Enterobacteria phage K1-5, complete genome.
gb:AF493143_149374078498e-05509-772791-884-2885Pseudomonas phage gh-1, complete sequence.
gb:CR382138_167156979474e-04605-712201-236-2378Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii.
pir|S66157|S6615780474e-04704-772131-153-2153probable DNA-directed RNA polymerase (EC 2.7.7.6) - wheat (fragment)
gb:AB078342_152371781475e-04695-772139-164-2164Adiantum capillus-veneris RPOT gene for T7 phage-type RNA polymerase, partial cds.
gb:AE016782_33169382450.002509-772759-851-2852Pseudomonas putida KT2440 section 9 of 21 of the complete genome.>gb:AE015451_946770 Pseudomonas putida KT2440 complete
gb:BPH251805_150461383440.003509-772790-883-2884Bacteriophage phiYeO3-12 complete genome.
sp|P07659|RPOL_BPT384440.003509-772790-883-2884DNA-directed RNA polymerase (EC 2.7.7.6).>pir|A29060|RNBPT3 DNA-directed RNA polymerase (EC 2.7.7.6) - phage T3>gb:BT331
gb:BC076032_255891541400.030127-618106-249+1260Danio rerio cDNA clone IMAGE:7046195, partial cds.
gb:AY247822_149808185400.062509-772789-882-2883Yersinia pestis phage phiA1122, complete genome.
gb:BX572601_80214086380.18509-772269-365-2540Rhodopseudomonas palustris CGA009 complete genome; segment 9/16.
gb:ACU34405_120836187370.31704-772135-157-2157Acanthamoeba castellani phage T3/T7-like RNA polymerase gene, partial cds.
gb:ISU34284_168327788370.53704-772139-161-2161Isochrysis sp. putative T3/T7-like RNA polymerase gene, partial cds.
pir|S66152|S6615289370.53704-772139-161-2161probable DNA-directed RNA polymerase (EC 2.7.7.6) - Isochrysis sp. (fragment)
gb:AE016817_174702043350.96400-60686-154+1504Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence.
gb:AF133505_177093190351.5635-772775-822-2896Neurospora crassa mitochondrial plasmid Harbin-3, complete plasmid sequence.
gb:NCMIDRPM_169057791351.5635-772775-822-2896N. crassa mitochondrial linear plasmid (maranhar) DNA for putative RNA and DNA polymerase.
sp|P33540|RPOP_NEUCR92351.5635-772775-822-2896Probable DNA-directed RNA polymerase (EC 2.7.7.6).>pir|S26984|S26984 probable DNA-directed RNA polymerase (EC 2.7.7.6) -
gb:AE013209_29023644342.1127-270241-290+1324Thermoanaerobacter tengcongensis MB4, section 236 of 244 of the complete genome.>gb:AE008691_1112301 Thermoanaerobacter
gb:AF355103_179069993343.4599-772884-938-2993Pleurotus ostreatus linear mitochondrial plasmid mlp2, partial sequence.
gb:TPU34406_140053894343.4704-772133-155-2155Tetrahymena pyriformis phage T3/T7-like RNA polymerase gene, partial cds.
gb:CR382122_165520045333.6130-5881-148+1590Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis.
pir|H70168|H7016847336.2403-648105-183+1497hypothetical protein BB0553 - Lyme disease spirochete>gb:AE001157_32533 Borrelia burgdorferi B31 (section 43 of 70) of t
gb:AF000226_176048395334.5704-772133-155-2155Rhizophydium sp. '
gb:AB050017_204623048328.1208-5881185-1314+11588Mus musculus CC1 mRNA for coiled-coil protein, complete cds.>gb:AB070619_2047407 Mus musculus Rb1cc1 mRNA for transcript
pir|G86674|G8667449328.1346-588143-223+1286DNA-directed DNA polymerase (EC 2.7.7.7) [imported] - Lactococcus lactis subsp. lactis (strain IL1403)>gb:AE006276_21730