Clone JMSF027H11 [sequences]

previous contigF:004734 contigR:012388
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AY091770_15747301994e-20143-3702-77+211381e-31402-755319-435-1531Arabidopsis thaliana MFL8.1/MFL8.1 mRNA, complete cds.>gb:BT002277_1635880 Arabidopsis thaliana At2g43210/MFL8.1 mRNA, c
gb:AC004450_15317072994e-20143-3702-77+221381e-31402-755319-435-1531Arabidopsis thaliana chromosome 2 clone F14B2 map CIC10F02, complete sequence.>gb:AC006224_1533696 Arabidopsis thaliana
pir|D84863|D848633994e-20143-3702-77+231381e-31402-755319-435-1470hypothetical protein At2g43210 [imported] - Arabidopsis thaliana
gb:BC064707_25538845481e-04164-3704-71+220420.010513-755310-390-1500Danio rerio zgc:73362, mRNA (cDNA clone MGC:73362 IMAGE:4144799), complete cds.
gb:AE014296_113523416351.2167-3525-65+229400.037537-773397-477-1656Drosophila melanogaster chromosome 3L, complete sequence.>gb:AE003557_1215472 Drosophila melanogaster chromosome 3L, sec
sp|P34631|YOJ8_CAEEL4644e-09513-767281-365-1469Hypothetical protein ZK353.8 in chromosome III.>pir|S44655|S44655 ZK353.8 protein - Caenorhabditis elegans>gb:L15313_138
gb:BC067166_25546415552e-06540-761219-291-1294Danio rerio zgc:77531, mRNA (cDNA clone MGC:77531 IMAGE:6805571), complete cds.
gb:BC020806_19772194502e-05158-4272-95+295Homo sapiens UBX domain containing 2, mRNA (cDNA clone IMAGE:4280469), complete cds.
gb:BC074627_25581226504e-05540-767208-284-1287Xenopus tropicalis MGC89251 protein, mRNA (cDNA clone MGC:69553 IMAGE:5378974), complete cds.>gb:BC075456_2558559 Xenopu
gb:BC074345_25578567498e-05540-767211-287-1290Xenopus laevis MGC84184 protein, mRNA (cDNA clone MGC:84184 IMAGE:6953285), complete cds.
gb:BC072068_25563328482e-04540-767217-293-1296Xenopus laevis MGC78955 protein, mRNA (cDNA clone MGC:78955 IMAGE:4404582), complete cds.
sp|P38349|YB9R_YEAST9473e-04540-767215-290-1436Hypothetical protein YBR273C.>pir|S46154|S46154 hypothetical protein YBR273c - yeast (Saccharomyces cerevisiae)>gb:SCYBR
gb:AY142615_158303110475e-04552-767446-517-1525Arabidopsis thaliana unknown protein (At4g23040) mRNA, complete cds.>gb:AF360264_1791213 Arabidopsis thaliana unknown pr
pir|T05136|T0513611475e-04552-767498-569-1577hypothetical protein F7H19.230 - Arabidopsis thaliana>gb:ATCHRIV58_1546141 Arabidopsis thaliana DNA chromosome 4, contig
gb:AC116986_120752412450.001546-770579-657-1662Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.
gb:CQ834650_145399113450.002540-767115-194-1200Sequence 521 from Patent WO2004058805.
pir|S27965|S2796514450.002540-767213-292-1298hypothetical protein - human>gb:HUMORF_2035272 Human ORF mRNA, complete cds.
sp|Q04323|U33K_HUMAN15450.002540-767212-291-1297UBA/UBX 33.3 kDa protein.>gb:CQ834652_1453992 Sequence 523 from Patent WO2004058805.>gb:AX961874_1484431 Sequence 85 fro
gb:AX961872_148443016440.003540-764213-291-1297Sequence 83 from Patent WO03104277.
gb:AP004163_183844117440.004552-773499-572-1582Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1323_A06.
gb:AY042788_156085318440.004552-767311-382-1390Arabidopsis thaliana Unknown protein (T5C23.170) mRNA, complete cds.>gb:AY064650_1566099 Arabidopsis thaliana unknown pr
sp|Q922Y1|U33K_MOUSE19430.007540-767212-291-1297UBA/UBX 33.3 kDa protein.>gb:BC006701_2090322 Mus musculus DNA segment, Chr 19, ERATO Doi 721, expressed, mRNA (cDNA clo
gb:D87684_19953666420.010158-37023-92+2529Homo sapiens mRNA for KIAA0242 protein, partial cds.
gb:CR861265_11852727420.010158-3702-71+2508Pongo pygmaeus mRNA; cDNA DKFZp459K063 (from clone DKFZp459K063).
sp|Q92575|UXD2_HUMAN8420.010158-3702-71+2508UBX domain-containing protein 2.>gb:BC035594_1981613 Homo sapiens UBX domain containing 2, mRNA (cDNA clone MGC:45412 IM
gb:AY071423_129550721420.013564-755255-317-1330Drosophila melanogaster RE50471 full length cDNA.
gb:AE014296_113523822420.013564-755256-318-1331Drosophila melanogaster chromosome 3L, complete sequence.>gb:AE003557_1215476 Drosophila melanogaster chromosome 3L, sec
gb:CR380955_165192223420.017540-761214-287-1429Candida glabrata strain CBS138 chromosome I complete sequence.
gb:CQ834654_145399324420.017555-767212-286-1312Sequence 525 from Patent WO2004058805.>gb:AX961876_1484432 Sequence 87 from Patent WO03104277.>gb:BC001372_1967531 Homo
gb:BC088845_21106239410.013158-3702-71+2506Rattus norvegicus UBX domain containing 2 (predicted), mRNA (cDNA clone MGC:105559 IMAGE:7307995), complete cds.
gb:AK029431_116149210410.017158-3702-71+2244Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833435I06 product:hypothetical Thioredo
gb:AK019371_116003011410.017158-3702-71+2227Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3000003E04 product:hypothetical Thiored
gb:AK011233_115627112410.017158-3702-71+2238Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2600017A09 product:hypothetical T
sp|Q8VCH8|UXD2_MOUSE13410.017158-3702-71+2506UBX domain-containing protein 2.>gb:BC019795_2093114 Mus musculus UBX domain containing 2, mRNA (cDNA clone MGC:30282 IM
pir|T33830|T3383025410.022564-758224-287-1299hypothetical protein F23C8.4 - Caenorhabditis elegans>gb:AF106583_1241724 Caenorhabditis elegans cosmid F23C8, complete
gb:AE016818_174796526410.028540-761127-200-1294Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence.
gb:AK075716_117095414400.023158-3702-71+2506Mus musculus adult male liver cDNA, RIKEN full-length enriched library, clone:1300013G12 product:hypothetical Thioredoxi
gb:AX015710_145645527400.037537-758210-286-1385Sequence 1 from Patent WO9950420.
gb:AE014296_113523528400.037537-773250-330-1509Drosophila melanogaster chromosome 3L, complete sequence.>gb:AE003557_1215473 Drosophila melanogaster chromosome 3L, sec
gb:CR382126_165840130400.063540-761225-298-1393Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:AP005392_185097531380.18540-749323-392-1396Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04.
sp|P47049|YJE8_YEAST32380.18540-767189-264-1396Hypothetical protein YJL048C.>pir|S56820|S56820 hypothetical protein YJL048c - yeast (Saccharomyces cerevisiae)>gb:AY692
gb:NCB13O8_168923933370.31537-755359-430-1433Neurospora crassa DNA linkage group V BAC contig B13O8.
gb:AP005681_185589534370.41552-758486-554-1564Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07.>gb:AP005864_1859246 Oryza sativa
gb:BC077804_256045735360.70513-755343-421-1531Xenopus laevis UBXD2 protein, mRNA (cDNA clone IMAGE:5155135), partial cds.
sp|Q924K2|FAF1_RAT36360.70537-755575-646-1649FAS-associated factor 1 (FAF1 protein).>gb:AF293459_2061822 Rattus norvegicus fas-associated factor 1 (Faf1) mRNA, compl
gb:BC065098_210552037360.91540-755575-645-1649Mus musculus Fas-associated factor 1, mRNA (cDNA clone MGC:86078 IMAGE:30362116), complete cds.
gb:CR382135_166838738360.91540-761244-337-1555Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii.
sp|P54731|FAF1_MOUSE39360.91540-755575-645-1649FAS-associated factor 1 (FAF1 protein).>gb:MMU39643_2121169 Mus musculus FAF1 mRNA, complete cds.
gb:AY849939_239073015350.73240-3533219-3251+33432Japanese encephalitis virus strain HW, complete genome.
gb:AF323104_178614440351.6558-758328-393-1400Pisum sativum phosphatase-like protein Psc923 mRNA, complete cds.
gb:AF045551_218473917341.6240-3533219-3251+33432Japanese encephalitis virus strain K94P05, complete genome.
gb:AE016959_102347741342.7540-749393-462-1466Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence.>gb:AC051634_1540194 Oryza sativa chromosome 10
gb:SAU91741_17280042343.5573-75241-102-1136Staphylococcus aureus teichoic acid biosynthesis TagB gene, partial cds and TagX and TagD genes, complete cds.
gb:CP000046_9085743343.5573-752272-333-1367Staphylococcus aureus subsp. aureus COL, complete genome.
gb:JEVSAA_244088418332.8261-3533226-3251+33432Japanese encephalitis virus strain SA(A) genomic RNA, complete genome.
gb:JEVLINGCG_244086219332.8261-3533226-3251+33432Japanese encephalitis virus strain Ling complete genome.
gb:JEVCMNAA_244079820332.8261-3533099-3124+33305Japanese encephalitis SA-14 virus, complete genome.
gb:JEU15763_244070021332.8261-3533226-3251+33432Japanese encephalitis virus C, prM, M, E, NS1, NS2A, NS2B, NS3, NS4A, NS4B, and NS5 polyprotein mRNA, complete cds.
gb:JEU14163_244069922332.8261-3533226-3251+33432Japanese encephalitis virus SA14 polyprotein mRNA, complete cds.
gb:AY585242_236373423332.8261-3533226-3251+33432Japanese encephalitis virus strain K87P39, complete genome.>gb:AY585243_2363735 Japanese encephalitis virus CNU/LP2, com
gb:AY508813_235431624332.8261-3533226-3251+33432Japanese encephalitis virus strain JaOH0566/Japan/1966/human, complete genome.
gb:AY508812_235431525332.8261-3533226-3251+33432Japanese encephalitis virus strain ML17 (live vaccine)/Japan/1981/human, complete genome.
gb:AY316157_232695626332.8261-3533226-3251+33432Japanese encephalitis virus strain KV1899, complete genome.
gb:AY303798_232505627332.8261-3533226-3251+33432Japanese encephalitis virus strain CC27-S8, complete genome.
gb:AY303797_232505528332.8261-3533226-3251+33432Japanese encephalitis virus strain CC27-S6, complete genome.
gb:AY303796_232505429332.8261-3533226-3251+33432Japanese encephalitis virus strain CC27-L3, complete genome.
gb:AY303795_232505330332.8261-3533226-3251+33432Japanese encephalitis virus strain CC27-L1, complete genome.
gb:AY303794_232505231332.8261-3533226-3251+33432Japanese encephalitis virus strain CJN-L1, complete genome.
gb:AY303793_232505132332.8261-3533226-3251+33432Japanese encephalitis virus strain CJN-S1, complete genome.
gb:AY303792_232505033332.8261-3533226-3251+33432Japanese encephalitis virus strain T1P1-L4, complete genome.
gb:AY303791_232504934332.8261-3533226-3251+33432Japanese encephalitis virus strain T1P1-S1, complete genome.
gb:AY184212_230667735332.8261-3533226-3251+33432Japanese encephalitis virus strain JKT6468 polyprotein gene, complete cds.
gb:AF486638_226511736332.8261-3533226-3251+33432Japanese encephalitis virus strain YL polyprotein mRNA, complete cds.
gb:AF416457_225273437332.8261-3533226-3251+33432Japanese encephalitis virus attenuated strain SA14-12-1-7, complete genome.
gb:AF315119_223334638332.8261-3533226-3251+33432Japanese encephalitis virus strain SA14-14-2, complete genome.
gb:AF254453_222282639332.8261-3533226-3251+33432Japanese encephalitis virus strain T1P1 complete genome.
gb:AF254452_222282540332.8261-3533226-3251+33432Japanese encephalitis virus strain CH1392 complete genome.
gb:AF221500_221751941332.8261-3533226-3251+33432Japanese encephalitis virus isolate CH2195SA, complete genome.
gb:AF221499_221751842332.8261-3533226-3251+33432Japanese encephalitis virus isolate CH2195LA, complete genome.
gb:AF217620_221654043332.8261-3533226-3251+33432Japanese encephalitis virus FU strain, complete genome.
gb:AF098737_219483044332.8261-3533226-3251+33432Japanese encephalitis virus strain TL, complete genome.
gb:AJ720274_250246144335.9558-758296-361-1369Gallus gallus mRNA for hypothetical protein, clone 13o20.
gb:AF098736_219482945332.8261-3533226-3251+33432Japanese encephalitis virus strain TC, complete genome.
gb:AF098735_219482846332.8261-3533226-3251+33432Japanese encephalitis virus strain HVI, complete genome.
gb:AF080251_219039947332.8261-3533226-3251+33432Japanese encephalitis virus isolate Vellore P20778, complete genome.
gb:AF075723_218983648332.8261-3533226-3251+33432Japanese encephalitis virus strain GP78, complete genome.
gb:AF069076_218886949332.8261-3533226-3251+33432Japanese encephalitis virus JaGAr 01 complete genome.
gb:AF014161_217827550332.8261-3533226-3251+33432Japanese encephalitis virus polyprotein gene, complete cds.
gb:AF014160_217827451332.8261-3533226-3251+33432Japanese encephalitis virus polyprotein gene, complete cds.
gb:AB196925_217557752332.8261-3533226-3251+33432Japanese encephalitis virus genomic RNA, complete genome, clone:JEV-rAT.
gb:AB196924_217557653332.8261-3533226-3251+33432Japanese encephalitis virus genomic RNA, complete genome, clone:JEV-at222.
gb:AB196923_217557554332.8261-3533226-3251+33432Japanese encephalitis virus genomic RNA, complete genome, clone:JEV-AT31.>gb:AB196926_2175578 Japanese encephalitis viru
gb:AB051292_216307355332.8261-3533226-3251+33432Japanese encephalitis virus gene for viral protein, complete cds.
sp|P32886|POLG_JAEVJ56332.8261-3533226-3251+33432Genome polyprotein [Contains: Capsid protein C (Core protein); Matrix protein (Envelope glycoprotein M); Major envelope
sp|P19110|POLG_JAEV557332.8261-3533226-3251+33432Genome polyprotein [Contains: Capsid protein C (Core protein); Matrix protein (Envelope protein M); Major envelope prote
sp|P27395|POLG_JAEV158332.8261-3533226-3251+33432Genome polyprotein [Contains: Capsid protein C (Core protein); Matrix protein (Envelope protein M); Major envelope prote
gb:BC076588_210678559334.747-124154-179-2853Mus musculus cDNA clone IMAGE:30615996, partial cds.
gb:AK173081_207001560334.747-124382-407-21081Mus musculus mRNA for mKIAA0992 protein.
gb:AF205079_205896161334.747-12490-115-2323Mus musculus strain ICR 90 kDa actin-associated protein palladin mRNA, partial cds.
pir|B90445|B9044562334.7137-3221-63+2285regucalcin homolog [imported] - Sulfolobus solfataricus>gb:AE006864_223431 Sulfolobus solfataricus P2 section 223 of 272