Clone JMSF021K08 [sequences]

previous contigF:006003 contigR:008616
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AY115836_1578926103248e-88152-6761-175+261472e-34478-720579-659-1659Medicago truncatula auxin efflux carrier protein (PIN1) gene, complete cds.
sp|Q9S7Z8|AEC3_ARATH43271e-88152-6761-175+2161442e-33478-720560-640-1640Auxin efflux carrier component 3 (AtPIN3).>pir|G96733|G96733 auxin transport protein [imported] - Arabidopsis thaliana>g
gb:BJU132363_163303773262e-88152-6761-175+2141459e-34478-720559-639-1639Brassica juncea mRNA for efflux carrier of polar auxin transport.
gb:BJU249298_163303953262e-88152-6761-175+2201434e-33478-720555-635-1635Brassica juncea mRNA for efflux carrier, pin3 (pin3 gene).
gb:BJU249297_163303863262e-88152-6761-175+2211434e-33478-720560-640-1640Brassica juncea mRNA for efflux carrier, pin2 (pin2 gene).
sp|Q940Y5|AEC7_ARATH33285e-89152-6761-175+2271411e-32478-720539-619-1619Auxin efflux carrier component 7 (AtPIN7).>gb:AF087820_1767253 Arabidopsis thaliana auxin transport protein (PIN7) mRNA,
gb:AB112364_1527173113172e-85152-6761-175+231511e-35478-720537-617-1617Pisum sativum PsPIN2 mRNA for putative auxin transport protein, complete cds.
gb:AY115838_1578928123162e-85152-6761-175+221526e-36478-720541-621-1621Medicago truncatula auxin efflux carrier protein (PIN3) gene, complete cds.
gb:AF515434_1807455133156e-85152-6761-175+211533e-36478-720560-640-1640Populus tremula x Populus tremuloides PIN1-like auxin transport protein (pin3) mRNA, complete cds.
gb:AC005560_153280783256e-88152-6761-175+2311389e-32478-720532-612-1612Arabidopsis thaliana chromosome 2 clone F2I9 map rga, complete sequence.>gb:AC006200_1533581 Arabidopsis thaliana chromo
sp|Q8RWZ6|AEC4_ARATH93256e-88152-6761-175+2321389e-32478-720536-616-1616Auxin efflux carrier component 4 (AtPIN4).>pir|E84424|E84424 probable auxin transport protein [imported] - Arabidopsis t
gb:AF247005_1780574153084e-83152-6761-175+2111457e-34478-720554-634-1634Momordica charantia auxin efflux carrier (AEC3) mRNA, complete cds.
gb:AF190881_1775451192932e-78152-6731-174+251471e-34478-720534-614-1614Populus tremula x Populus tremuloides PIN1-like auxin transport protein (pin1) mRNA, complete cds.
gb:AP005522_1853396232917e-78152-6731-174+241494e-35478-720512-592-1592Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0479H10.
gb:AF247004_1780573172971e-79152-6731-174+2181434e-33478-720527-607-1607Momordica charantia auxin efflux carrier (AEC2) mRNA, complete cds.
gb:AB085897_1524431162984e-80152-6731-174+2231425e-33478-720537-617-1617Cucumis sativus CS-PIN1 mRNA for PIN1-like auxin transport protein, complete cds.
pir|T02876|T02876212924e-78152-6731-174+2101464e-34478-720515-595-1595probable auxin transport protein - rice>gb:AF056027_1764650 Oryza sativa auxin transport protein REH1 (REH1) mRNA, compl
gb:AF246995_1780571182956e-79152-6731-174+2191434e-33478-720527-607-1607Momordica charantia AEC1 (AEC1) precursor RNA, complete cds.
gb:AY222857_1590597242919e-78152-6731-174+2221434e-33478-720519-599-1599Pisum sativum auxin efflux carrier protein PIN1 mRNA, complete cds.
gb:AF515435_1807456222915e-78152-6761-175+2241411e-32478-720508-588-1588Populus tremula x Populus tremuloides PIN1-like auxin transport protein (pin2) mRNA, complete cds.
gb:AY115839_1578929202924e-78152-6731-174+2301389e-32478-720524-604-1604Medicago truncatula auxin efflux carrier protein (PIN4) gene, complete cds.
gb:AY302060_1597329143132e-84152-6761-175+2401173e-25541-720560-619-1619Populus tomentosa PIN1-like protein mRNA, complete cds.
gb:AY553212_1613409272886e-77152-6761-175+2261411e-32478-720511-591-1591Medicago truncatula putative auxin efflux carrier protein 10 (PIN10) gene, complete cds.
gb:AP003725_1832479302817e-75152-6731-177+271472e-34478-717510-589-1589Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510C12.
gb:AP003725_1832478312817e-75152-6731-177+281472e-34478-717539-618-1618Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510C12.
gb:AY115840_1578930292849e-76152-6731-175+2151442e-33478-720444-524-1524Medicago truncatula auxin efflux carrier protein (PIN5) gene, complete cds.
sp|Q9C6B8|AEC1_ARATH252902e-77152-6731-174+2341364e-31478-720542-622-1622Auxin efflux carrier component 1 (PIN-FORMED protein) (AtPIN1).>pir|G96762|G96762 hypothetical protein F6D5.2 [imported]
gb:AY496058_1609086362788e-74152-6731-174+291464e-34478-720506-586-1586Triticum aestivum auxin transporter PIN1 mRNA, complete cds.
gb:AY148428_1584667352786e-74152-6731-174+2121457e-34478-720496-576-1576Gossypium hirsutum cultivar Xuzhou-142 PIN-like protein mRNA, complete cds.
gb:AF089084_1767283282871e-76152-6731-174+2331364e-31478-720542-622-1622Arabidopsis thaliana putative auxin efflux carrier protein (PIN1) mRNA, complete cds.
gb:AF086907_1767222322802e-74152-6761-175+2251411e-32478-720567-647-1647Arabidopsis thaliana root gravitropism control protein (PIN2) gene, complete cds.
sp|Q9LU77|AEC2_ARATH342802e-74152-6761-175+2281411e-32478-720567-647-1647Auxin efflux carrier component 2 (AtPIN2) (Auxin efflux carrier AGR) (Polar-auxin-transport efflux component AGRAVITROPI
gb:AY115837_1578927372771e-73152-6761-176+2291402e-32478-720545-625-1625Medicago truncatula auxin efflux carrier protein (PIN2) gene, complete cds.
gb:AP005769_1857542392671e-70152-6761-184+2171434e-33478-720550-630-1630Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0051O02.
gb:AY553210_1613407382762e-73152-6761-176+2351294e-29478-720451-531-1532Medicago truncatula putative auxin efflux carrier protein 7 (PIN7) gene, complete cds.
gb:PPA517429_1701270412554e-67152-6761-175+2361295e-29478-720633-713-1713Physcomitrella patens pin gene for putative auxin transport protein, exons 1-6.
pir|A86365|A8636523285e-89152-6761-175+251551e-06619-720539-572-1574probable auxin transport protein T26J12.14 - Arabidopsis thaliana>gb:AE005172_891258 Arabidopsis thaliana chromosome 1,
gb:AY553209_1613406422424e-63152-6731-174+2371242e-27478-714449-527-1527Medicago truncatula putative auxin efflux carrier protein 6 (PIN6) gene, complete cds.
gb:AF087819_1767252432385e-62152-6731-174+2381194e-26478-714492-570-1570Arabidopsis thaliana auxin transport protein (PIN6) mRNA, complete cds.
sp|Q9SQH6|AEC6_ARATH442385e-62152-6731-174+2391194e-26478-714492-570-1570Probable auxin efflux carrier component 6 (AtPIN6).
gb:AC098571_1736749402589e-68152-6731-180+247929e-18544-717511-568-1572Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B10, complete sequence.
gb:AB023042_1515469332802e-74152-6761-175+249597e-08619-720567-600-1660Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUL3.
gb:AY052356_156272713285e-89152-6761-175+2527Arabidopsis thaliana At1g23080/T26J12_14 mRNA, complete cds.
gb:AF089085_1767284262886e-77152-6731-174+2420Arabidopsis thaliana putative auxin efflux carrier protein (PIN1) gene, complete cds.
sp|Q9LFP6|AEC5_ARATH491757e-43152-6671-172+2411073e-22484-714289-365-1367Putative auxin efflux carrier component 5 (AtPIN5).>pir|T51455|T51455 auxin transport protein-like - Arabidopsis thalian
gb:AY553211_1613408461793e-44152-6161-155+2451004e-20484-720281-359-1363Medicago truncatula putative auxin efflux carrier protein 9 (PIN9) gene, complete cds.
sp|Q9FFD0|AEC8_ARATH481795e-44152-6221-157+246982e-19484-714271-347-1351Putative auxin efflux carrier component 8 (AtPIN8).
gb:AP003221_1825510511711e-41152-6251-172+2421051e-21478-720346-426-1426Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09.
gb:AP003437_1829411501741e-42152-6641-173+2431003e-20484-714283-359-1363Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11.
gb:AP004015_1836402521602e-38152-6221-163+2441004e-20481-714291-368-1370Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02.
gb:AB005242_1509521471795e-44152-6221-157+248743e-12541-714294-351-1351Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQK4.
pir|A96800|A96800452294e-59152-6731-188+2490hypothetical protein F22K20.18 [imported] - Arabidopsis thaliana>gb:AE005173_895238 Arabidopsis thaliana chromosome 1, b
gb:AJ849329_1814747131459e-34478-720292-372-1372Populus tremula x Populus tremuloides mRNA for putative plasma membrane intrinsic protein (pin3 gene).
gb:AY496447_1609102531172e-25152-3431-64+264Populus tomentosa putative auxin efflux carrier protein (PIN1) mRNA, partial cds.
pir|AB3322|AB332262420.010170-6101-146+255380.21484-720231-309-1311transporter BMEI0560 [imported] - Brucella melitensis (strain 16M)>gb:AE009498_252478 Brucella melitensis 16M chromosom
gb:BA000036_72011373350.92275-59836-141+286328.7514-717231-298-1310Corynebacterium glutamicum ATCC 13032 DNA, complete genome.>gb:BX927155_833924 Corynebacterium glutamicum ATCC 13032, IS
gb:AP003896_183492754643e-09449-62292-143+2200Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04.>gb:AP005620_1855057 Oryza sativa
gb:AP002972_182408050573e-07626-7181-31+270Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0638D12.
gb:AP003866_183454955559e-07464-62245-91+2243Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1092_A07.
gb:BX950851_84305156498e-05161-6709-174+2318Erwinia carotovora subsp. atroseptica SCRI1043, complete genome.
gb:CR522870_10008357465e-04179-5414-124+2314Desulfotalea psychrophila LSv54 chromosome.
pir|H72378|H7237858459e-04170-6762-159+2296conserved hypothetical protein - Thermotoga maritima (strain MSB8)>gb:AE001721_38337 Thermotoga maritima MSB8 section 33
gb:BX640421_80791059450.001170-6131-148+2315Bordetella pertussis strain Tohama I, complete genome; segment 11/12.
gb:BX640443_81462360420.007170-6131-148+2315Bordetella bronchiseptica strain RB50, complete genome; segment 7/16.
gb:BX640430_81077361420.007170-6131-148+2315Bordetella parapertussis strain 12822, complete genome; segment 8/14.
gb:AP008231_58099352400.055484-714243-318-1323Synechococcus elongatus PCC 6301 DNA, complete genome.
gb:AE012823_28595353400.055484-714240-317-1320Chlorobium tepidum TLS section 44 of 194 of the complete genome.>gb:AE006470_933121 Chlorobium tepidum TLS complete geno
gb:AE013146_28955163400.049191-64610-168+2306Thermoanaerobacter tengcongensis MB4, section 173 of 244 of the complete genome.>gb:AE008691_1111616 Thermoanaerobacter
gb:SCO939121_17856554380.16481-717228-307-1307Streptomyces coelicolor A3(2) complete genome; segment 18/29.
gb:CP000031_8674964380.14179-5295-121+2310Silicibacter pomeroyi DSS-3, complete genome.
gb:CP000031_8432765380.18179-6044-144+2313Silicibacter pomeroyi DSS-3, complete genome.
gb:BA000030_69949456370.27436-720300-409-1412Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
gb:BA000040_73564757370.36478-711235-313-1314Bradyrhizobium japonicum USDA 110 DNA, complete genome.
gb:BX571856_78062158370.46478-70844-116-1435Staphylococcus aureus subsp. aureus strain MRSA252, complete genome.
gb:BA000012_66689259370.46484-711236-311-1316Mesorhizobium loti MAFF303099 DNA, complete genome.
pir|B89892|B8989260370.46478-70844-116-1435uracil permease [imported] - Staphylococcus aureus (strain N315)>gb:CP000046_91353 Staphylococcus aureus subsp. aureus C
gb:CR543861_10271766370.24176-6101-145+2307Acinetobacter sp. ADP1 complete genome.
gb:BA000040_73257368370.41155-40967-153+2426Bradyrhizobium japonicum USDA 110 DNA, complete genome.
gb:BA000037_72241369360.54173-6046-148+2317Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence.
gb:AE017283_43125570360.70161-59542-176+2288Propionibacterium acnes KPA171202, complete genome.
gb:AE013014_28812971360.70200-59212-145+2315Thermoanaerobacter tengcongensis MB4, section 41 of 244 of the complete genome.>gb:AE008691_1110194 Thermoanaerobacter t
gb:SME591786_18532461351.0481-720227-311-1311Sinorhizobium meliloti 1021 complete chromosome; segment 5/12.
gb:AE012558_28479862351.3460-660435-503-11077Xylella fastidiosa Temecula1, section 6 of 9 of the complete genome.>gb:AE009442_961374 Xylella fastidiosa Temecula1, co
gb:CR378681_9877863351.8478-696220-293-1293Photobacterium profundum SS9 chromosome 2; segment 7/7.
gb:AF178529_247874072350.92245-511391-470+2918Gallus gallus Rad54b (RAD54B) mRNA, complete cds.
gb:AE017263_42115874350.92347-547119-185+2462Mesoplasma florum L1 complete genome.
gb:AE017333_44870264342.3484-690266-343-1352Bacillus licheniformis DSM 13, complete genome.>gb:CP000002_858501 Bacillus licheniformis ATCC 14580, complete genome.
gb:AE015782_31779365342.3508-705242-310-1319Shewanella oneidensis MR-1 section 331 of 457 of the complete genome.>gb:AE014299_953390 Shewanella oneidensis MR-1 comp
gb:CR555306_10688966342.3502-720211-286-1291Azoarcus sp. EbN1 complete genome.
gb:CP000001_85255567343.0490-720223-300-1305Bacillus cereus ZK, complete genome.
gb:BX572601_80228368343.0487-714232-309-1318Rhodopseudomonas palustris CGA009 complete genome; segment 9/16.
gb:AE017038_38456569343.0484-690266-343-1355Bacillus anthracis str. Ames section 15 of 18 of the complete genome.>gb:AE017225_409661 Bacillus anthracis str. Sterne,
gb:AE017004_37705370343.0490-720223-300-1305Bacillus cereus ATCC 14579 section 7 of 18 of the complete genome.>gb:AE016877_1017303 Bacillus cereus ATCC 14579 comple
gb:KPU56096_13973575342.0173-5743-137+2319Klebsiella pneumoniae MdcA, MdcB, MdcC, MdcD, MdcE, MdcF, and MdcG, genes, complete cds.
gb:BX571658_77809576342.7170-5325-116+2302Wolinella succinogenes, complete genome; segment 2/7.
gb:BX572099_79877971333.9484-717226-303-1307Prochlorococcus marinus MIT9313 complete genome; segment 5/7.
gb:AE017355_46327072333.9490-720223-300-1305Bacillus thuringiensis serovar konkukian str. 97-27, complete genome.
gb:AE017030_38226573333.9490-720223-300-1305Bacillus anthracis str. Ames section 7 of 18 of the complete genome.>gb:AE017225_407381 Bacillus anthracis str. Sterne,
pir|B82566|B8256674333.9460-660435-503-11077acriflavin resistance protein D XF2385 [imported] - Xylella fastidiosa (strain 9a5c)>gb:AE004047_50013 Xylella fastidios
sp|P60674|MNHA_STAAM75333.9484-714470-550-1801Na(+)/H(+) antiporter subunit A (Mnh complex subunit A).>sp|P60675|MNHA_STAAN Na(+)/H(+) antiporter subunit A (Mnh compl
gb:CP000024_87605076335.1499-705238-309-1312Streptococcus thermophilus CNRZ1066, complete genome.
gb:KPU95087_13975777333.5173-5743-137+2319Klebsiella pneumoniae malonate decarboxylase gene cluster (mdcA, mdcB, mdcC, mdcD, mdcE, mdcF, mdcG, mdcH, mdcR) genes,
gb:CP000023_87416177335.1499-705238-309-1312Streptococcus thermophilus LMG 18311, complete genome.
gb:HSM806072_201816078334.5248-52664-158+2870Homo sapiens mRNA; cDNA DKFZp686D1686 (from clone DKFZp686D1686); complete cds.
gb:AE013536_29318578335.1484-693182-266-1280Methanosarcina mazei strain Goe1, section 318 of 379 of the complete genome.>gb:AE008384_967294 Methanosarcina mazei str
gb:AE011644_27515479335.1514-714224-290-1305Xanthomonas axonopodis pv. citri str. 306, section 22 of 469 of the complete genome.>gb:AE008923_916929 Xanthomonas axon
gb:BC028730_197934379334.5248-52664-158+2870Homo sapiens G protein-coupled receptor 155, mRNA (cDNA clone MGC:33390 IMAGE:4813561), complete cds.
gb:AK091200_191342580334.5248-52664-158+2744Homo sapiens cDNA FLJ33881 fis, clone CTONG2007168.
gb:BX571856_78036480336.7484-714470-550-1801Staphylococcus aureus subsp. aureus strain MRSA252, complete genome.
gb:AE017278_42567381336.7484-690266-343-1356Bacillus cereus ATCC 10987, section 15 of 18 of the complete genome.>gb:AE017194_1064092 Bacillus cereus ATCC 10987, com
gb:HSM805392_118749881334.5248-52664-158+2870Homo sapiens mRNA; cDNA DKFZp761A1011 (from clone DKFZp761A1011).
gb:AE017012_37925482336.7484-690266-343-1355Bacillus cereus ATCC 14579 section 15 of 18 of the complete genome.>gb:AE016877_1019504 Bacillus cereus ATCC 14579 compl
gb:CR859482_118359882334.5248-52666-160+2872Pongo pygmaeus mRNA; cDNA DKFZp459G1125 (from clone DKFZp459G1125).
gb:AE013523_29308283336.7484-660264-330-1362Methanosarcina mazei strain Goe1, section 305 of 379 of the complete genome.>gb:AE008384_967191 Methanosarcina mazei str
gb:BX640441_81415683334.5494-667113-166+2299Bordetella bronchiseptica strain RB50, complete genome; segment 5/16.
sp|Q8NXF6|MNHA_STAAW84336.7484-714470-550-1801Na(+)/H(+) antiporter subunit A (Mnh complex subunit A).>gb:CP000046_91103 Staphylococcus aureus subsp. aureus COL, comp
gb:BX640429_81036184334.5494-667113-166+2299Bordetella parapertussis strain 12822, complete genome; segment 7/14.
sp|Q9ZNG6|MNHA_STAAU85336.7484-714470-550-1801Na(+)/H(+) antiporter subunit A (Mnh complex subunit A).>gb:AB015981_2663 Staphylococcus aureus genes for OrfA, MnhA, Mn
gb:BX571873_78908485334.5308-60195-191+2403Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 15/17.
gb:AF119338_176970986335.9194-5325-103+2732Magnolia dodecapetala NADH dehydrogenase F subunit (ndhF) gene, partial cds; chloroplast gene for chloroplast product.
gb:AE016820_174965887335.9335-673493-611+2970Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence.
gb:AF141930_124433088335.9326-529212-279+2608Trichoplusia ni high affinity GABA transporter (GAT) mRNA, complete cds.
gb:BA000028_69508289335.9242-676185-313+2370Oceanobacillus iheyensis HTE831 DNA, complete genome.
gb:AE011560_27429090335.9245-53221-113+2307Leptospira interrogans serovar lai str. 56601 chromosome I, section 369 of 397 of the complete sequence.>gb:AE017300_435
sp|P23185|MCBC_ECOLI67320.36340-552115-176+1272Microcin B17 processing protein mcbC.>pir|C32058|C32058 mcbC protein - Escherichia coli plasmid pMccB17>gb:M17MCBABCD_14
gb:AE017282_42747287328.7484-642285-345-1362Methylococcus capsulatus str. Bath, complete genome.
gb:AE017180_40029388328.7484-630298-354-1370Geobacter sulfurreducens PCA, complete genome.
gb:AE016746_32252589328.7478-70844-116-1435Staphylococcus epidermidis ATCC 12228, section 3 of 9 of the complete genome.>gb:AE015929_1147194 Staphylococcus epiderm
gb:CP000029_8137690328.7478-70839-111-1430Staphylococcus epidermidis RP62A, complete genome.
gb:BC073491_255732791327.7248-52665-159+2842Xenopus laevis MGC81017 protein, mRNA (cDNA clone MGC:81017 IMAGE:5571061), complete cds.
sp|O34472|YRRI_BACSU91328.7484-690266-343-1353Hypothetical UPF0118 protein yrrI.>pir|C69979|C69979 conserved hypothetical protein yrrI - Bacillus subtilis>gb:BSUB0014
gb:BA000030_69942492327.7197-346247-301-1719Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
sp|O75443|TECA_HUMAN92328.7496-615492-537+12155Alpha-tectorin precursor.>gb:HSTECTA23_2020991 Homo sapiens alpha-tectorin (TECTA) gene, exon 23 and complete cds.
pir|A83186|A8318693327.7431-631423-491+21025probable RND efflux transporter PA3676 [imported] - Pseudomonas aeruginosa (strain PAO1)>gb:AE004787_57912 Pseudomonas a
pir|F82619|F8261994327.7191-565266-396+2447proton glutamate symport protein XF1937 [imported] - Xylella fastidiosa (strain 9a5c)>gb:AE004013_49568 Xylella fastidio
pir|S65673|S6567395327.7326-529213-280+2597GABA transport protein - tobacco hornworm>gb:MOTGABANT_1389973 Manduca sexta GABA neurotransmitter transporter mRNA, com