Clone JMSF019F13 [sequences]

previous contigF:009612 contigR:006915
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AF098458_176791511972e-5375-572252-417-1417Hevea brasiliensis latex-abundant protein (LAR) mRNA, complete cds.
gb:AY114141_157850421902e-5175-572246-409-1409Lycopersicon esculentum metacaspase 1 (MCA1) mRNA, partial cds.
pir|T01022|T0102231747e-4575-572249-410-1410hypothetical protein YUP8H12R.5 - Arabidopsis thaliana>gb:AE005173_895454 Arabidopsis thaliana chromosome 1, bottom arm
gb:AY219829_159038941625e-4275-572255-418-1418Arabidopsis thaliana metacaspase 4 mRNA, complete cds.>gb:AY322529_1599137 Arabidopsis thaliana metacaspase 7 (AMC7) mRN
pir|T01021|T0102151625e-4275-572255-418-1418hypothetical protein YUP8H12R.4 - Arabidopsis thaliana>gb:AE005173_895455 Arabidopsis thaliana chromosome 1, bottom arm
gb:PAB534970_169865861619e-4175-572253-417-1418Picea abies mRNA for metacaspase type II (mcII gene).
gb:AP003293_182747471489e-3875-572256-417-1417Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0691E06.
pir|T01023|T0102381454e-3675-572212-368-1368hypothetical protein YUP8H12R.6 - Arabidopsis thaliana>gb:AE005173_895453 Arabidopsis thaliana chromosome 1, bottom arm
gb:AY224533_159073091394e-3575-572262-420-1420Oryza sativa (japonica cultivar-group) isolate 23251 latex-abundant protein-like protein mRNA, complete cds.>gb:AC108523
gb:AY863051_163098511271e-28180-57223-168+3364Zea mays putative methyl-binding domain protein MBD115 mRNA, complete cds.
gb:AY029559_155926121272e-28189-5481-126+3428Zea mays putative methyl-binding domain protein MBD106 mRNA, complete cds.
gb:AB017071_151350431272e-28162-5483-141+3254Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSJ11.>gb:BT015051_1642021 Arabidopsis thaliana At3g15790 gene
gb:AF527618_180840841255e-28180-57826-163+3400Zea mays methyl binding domain protein MBD109 (mbd109) mRNA, complete cds.
pir|G86287|G8628751241e-27159-5782-143+3384hypothetical protein F9L1.28 - Arabidopsis thaliana>gb:AE005172_890531 Arabidopsis thaliana chromosome 1, top arm comple
gb:AY029558_155926061232e-27189-5421-122+3433Zea mays putative methyl-binding domain protein MBD105 mRNA, complete cds.
gb:AY219832_1590392101232e-3075-572243-403-1403Arabidopsis thaliana metacaspase 7 mRNA, complete cds.
pir|T01024|T01024111232e-3075-572228-388-1388hypothetical protein YUP8H12R.7 - Arabidopsis thaliana>gb:AE005173_895452 Arabidopsis thaliana chromosome 1, bottom arm
gb:AY322528_1599136121233e-3075-572243-403-1403Arabidopsis thaliana metacaspase 4 (AMC4) mRNA, complete cds.
gb:AF083737_176696771219e-27159-5782-140+3346Arabidopsis thaliana clone sps418 unknown mRNA.
gb:AC108523_173856413965e-1975-572281-424-1424Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_C04, complete sequence.
gb:AY086438_157148614721e-1184-323238-315-1320Arabidopsis thaliana clone 25121 mRNA, complete sequence.
gb:ATF21E1_154958515721e-1184-323243-320-1325Arabidopsis thaliana DNA chromosome 5, BAC clone F21E1 (ESSA project).>gb:AY063830_1565779 Arabidopsis thaliana putative
gb:AK175204_181719216695e-1175-323296-380-1381Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-62-F14.
pir|E86299|E8629917695e-1175-323296-380-1381F3O9.22 protein - Arabidopsis thaliana>gb:AE005172_890625 Arabidopsis thaliana chromosome 1, top arm complete sequence.>
gb:CP000031_876648400.027162-506300-403+3553Silicibacter pomeroyi DSS-3, complete genome.
gb:AF072245_20533589370.23159-353145-214+3249Mus musculus testis specific methyl-CpG binding protein MBD2 (Mbd2) mRNA, complete cds.>gb:MM2MBD1_2113737 Mus musculus
gb:AF072243_205335610370.23159-353145-214+3414Mus musculus methyl-CpG binding protein MBD2 (Mbd2) mRNA, complete cds.>gb:BC046607_2099310 Mus musculus methyl-CpG bind
gb:HSMETHYL2_201871411370.23159-353142-211+3302Homo sapiens methyl-CpG binding protein 2 (MBD2) gene, exon 2 and alternatively spliced testis-specific methyl-CpG bindi
gb:AF072242_188085312370.23159-353142-211+3411Homo sapiens methyl-CpG binding protein MBD2 (MBD2) mRNA, complete cds.>gb:BC032638_1980587 Homo sapiens methyl-CpG bind
gb:AC138001_174394213370.23276-51284-163+3256Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete sequence.
gb:AK004820_115261914370.23357-578197-270+3949Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200017E13 product:LON homolog [Rattus norv
gb:MUSNFH_212938215370.30249-572861-968+31072Mouse neurofilament component (NF-H) mRNA, complete cds.
gb:MMNFHGE_211669116370.30249-572860-967+31071M.musculus (Swiss-Webster) NF-H gene for neurofilament protein.
gb:AY190302_207883517370.30357-578197-270+3949Mus musculus mitochondrial ATP-dependent protease Lon mRNA, complete cds; nuclear gene for mitochondrial product.
gb:CR382139_167300818370.27105-335358-429-1440Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii.
gb:AL645522_207165718370.30249-572879-986+31090Mouse DNA sequence from clone RP23-64E17 on chromosome 11 Cntains the 3' end of the Nipsnap1 gene for 4-nitrophenylphosp
gb:AK122388_206905319370.30249-572835-942+31046Mus musculus mRNA for mKIAA0845 protein.
gb:TBR437302_139932719370.27105-314253-325-1347Trypanosoma brucei mRNA for metacaspase (MCA2 gene).
gb:AP004179_183858220370.30360-57215-88+3682Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_G07.>gb:AP005113_1848088 Oryza sativa
sp|P19246|NFH_MOUSE21370.30249-572876-983+31087Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H).>pir|JT0368|QFM
gb:ATU76607_155726322360.39258-554221-318+3350Arabidopsis thaliana splicing factor At-SRp40 mRNA, complete cds.
gb:AE014296_113699923360.39108-557106-238+31339Drosophila melanogaster chromosome 3L, complete sequence.>gb:AE014296_1137000 Drosophila melanogaster chromosome 3L, com
pir|F85294|F8529424360.39258-554220-317+3349splicing factor At-SRp40 [imported] - Arabidopsis thaliana>gb:ATCHRIV63_1546431 Arabidopsis thaliana DNA chromosome 4, c
pir|T01310|T0131025360.39339-572501-577+3870hypothetical protein T14P8.20 - Arabidopsis thaliana>gb:ATCHRIV6_1546228 Arabidopsis thaliana DNA chromosome 4, contig f
sp|P92965|RS40_ARATH26360.39258-554221-318+3350Arginine/serine-rich splicing factor RSP40.>pir|T05797|T05797 splicing factor SRp40 - Arabidopsis thaliana>gb:ATM7J2_155
gb:CR749490_118108827350.67357-542607-672+31074Homo sapiens mRNA; cDNA DKFZp781E1417 (from clone DKFZp781E1417).
gb:CR382131_166425928350.87363-5513-69+3221Yarrowia lipolytica chromosome E of strain CLIB99 of Yarrowia lipolytica.
gb:CR382124_165668929350.87369-572102-171+3456Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:BT003635_135703730350.87417-557192-238+31339Drosophila melanogaster AT19678 full insert cDNA.
gb:AL646065_54644631350.87132-356428-487+3632Ralstonia solanacearum GMI1000 chromosome, complete sequence; segment 9/19.
gb:AE010815_26680432350.87405-57880-137+3231Methanosarcina acetivorans str. C2A, section 160 of 534 of the complete genome.>gb:AE010299_907363 Methanosarcina acetiv
gb:BC024812_209473333351.1102-57844-213+3554Mus musculus methyl-CpG binding domain protein 4, mRNA (cDNA clone MGC:36060 IMAGE:5356016), complete cds.
gb:TBR437304_139932920341.8105-314259-331-1353Trypanosoma brucei mRNA for metacaspase (MCA4 gene).
gb:TBR437303_139932821342.3105-314263-335-1357Trypanosoma brucei mRNA for metacaspase (MCA3 gene).
pir|T41172|T4117222342.3105-326346-414-1425hypothetical protein SPCC1840.04 - fission yeast (Schizosaccharomyces pombe)>gb:SPCC1840_1721104 S.pombe chromosome III
gb:AB064595_216553334341.5240-440118-182+3297TT virus DNA, complete genome, isolate:CT23F.
gb:AK029021_116129135341.5260-57411-129-1516Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732482E20 product:hypothetical protei
pir|C86349|C8634936341.5264-578737-839+31181F8K7.4 protein - Arabidopsis thaliana>gb:AE005172_891110 Arabidopsis thaliana chromosome 1, top arm complete sequence.>g
gb:AY888006_254764937341.9198-35313-68+3257Gallus gallus methyl-CpG-binding domain protein 2 (MBD2) mRNA, complete cds.
gb:NCB11C21_168899738341.9276-566168-276+3425Neurospora crassa DNA linkage group V BAC clone B11C21.
gb:CR382132_166605339341.9252-581196-300+3309Yarrowia lipolytica chromosome F of strain CLIB99 of Yarrowia lipolytica.
gb:AC024841_120492740341.9354-57855-130+3185Caenorhabditis elegans cosmid Y59H11AM, complete sequence.
gb:BX640430_81070741341.9141-53391-241+3321Bordetella parapertussis strain 12822, complete genome; segment 8/14.>gb:BX640442_814559 Bordetella bronchiseptica strai
gb:BX640419_80720342341.9141-53391-241+3321Bordetella pertussis strain Tohama I, complete genome; segment 9/12.
pir|T39826|T3982643341.9294-566279-377+3649probable clathrin coat assembly protein - fission yeast (Schizosaccharomyces pombe)>gb:SPBC19F8_1719434 S.pombe chromos
gb:CR382126_165838223333.0105-326377-445-1456Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:AJ583824_190673944332.5357-542605-670+31072Homo sapiens mRNA for ubiquitin specific proteinase 53 (USP53 gene).
gb:AB037771_186656245332.5357-542444-509+3911Homo sapiens mRNA for KIAA1350 protein, partial cds.
gb:AX405873_146780146332.5357-542450-515+3917Sequence 288 from Patent WO0222660.
gb:AY223071_117653647332.5357-57516-82+3285Schistosoma japonicum clone ZZD1273 mRNA sequence.
sp|P60972|LGT_MYCPA48332.5234-572267-377+3427Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-).>gb:AE017231_412013 Mycobacterium avium subsp. paratuberculosis
gb:AF072249_205336049333.3102-57844-213+3554Mus musculus methyl-CpG binding protein MBD4 (Mbd4) mRNA, complete cds.>gb:AF120996_2055353 Mus musculus domesticus meth
gb:AB055153_204643450333.3255-554489-591+3967Rattus norvegicus mRNA for SRB-RGS, complete cds.
gb:AF072246_188085451333.3201-3531-55+3146Homo sapiens testis specific methyl-CpG binding protein MBD2 (MBD2) mRNA, partial cds.
gb:AE016820_174968652333.3327-572517-602+3884Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence.
gb:AE016759_32537653333.3192-563562-678+31061Escherichia coli CFT073 section 5 of 18 of the complete genome.>gb:AE014075_955960 Escherichia coli CFT073 complete geno
gb:AE010657_26540454333.3351-530163-222+3635Methanosarcina acetivorans str. C2A, section 2 of 534 of the complete genome.>gb:AE010299_905963 Methanosarcina acetivor
gb:SVU62479_245448155334.3153-29942-90+3113Sindbis virus E2 structural protein (E2) gene, partial cds.
gb:HSU79667_202627856334.3261-563929-1023+31182Human alpha1A-voltage-dependent calcium channel mRNA, splice form BI-1-V2-GGCAG, partial cds.
gb:HSU79665_202627657334.3261-563941-1035+31194Human alpha1A-voltage-sensitive calcium channel mRNA, splice form BI-1-GGCAG, partial cds.
gb:AF100774_188305458334.3261-563727-821+3980Homo sapiens voltage-dependent P/Q type calcium channel alpha 1A subunit (CACNA1A) mRNA, partial cds.
gb:OSJN00128_169536459334.3291-458190-245+3464Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088I22, complete sequence.
gb:NC100H1_168818960334.3330-581201-277+3689Neurospora crassa DNA linkage group V Cosmid contig 100H1.
gb:CR382139_167231761334.3309-581154-253+3320Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii.
gb:CR382132_166510724326.7123-389354-445-1461Yarrowia lipolytica chromosome F of strain CLIB99 of Yarrowia lipolytica.
pir|JQ0137|JQ013725326.7181-3996-77-3261hypothetical 30.1K protein - Pseudomonas aeruginosa
pir|D98052|D9805226328.8126-323218-285-1360X-Pro dipeptidase (EC 3.4.13.9) [imported] - Streptococcus pneumoniae (strain R6)>gb:AE008514_237765 Streptococcus pneum
pir|D95185|D9518527328.8126-323218-285-1360proline dipeptidase [imported] - Streptococcus pneumoniae (strain TIGR4)>gb:AE007453_226738 Streptococcus pneumoniae TI
gb:AY238336_252138762325.6198-35312-67+3256Danio rerio methyl-CpG binding protein 2 (mbd2) mRNA, complete cds.
gb:AB061672_246290663325.6183-3536-67+3267Xenopus laevis mRNA for methyl-CpG binding protein MBD2, complete cds.
gb:BA000040_73233364325.6387-569114-174+3328Bradyrhizobium japonicum USDA 110 DNA, complete genome.
gb:AJ715499_52968665325.6252-53360-154+3273Streptococcus pyogenes tetO gene, ORFA, ORFB, ORFC, ORFD, mefA gene, msrD gene, ORF6, ORF7 and ORF8, isolate m46.
pir|E72600|E7260066325.6171-44034-114+3114hypothetical protein APE1269 - Aeropyrum pernix (strain K1)>gb:BA000002_652003 Aeropyrum pernix K1 DNA, complete genome.
gb:BC084352_256373367327.4357-506208-256+31029Xenopus laevis hypothetical LOC495149, mRNA (cDNA clone IMAGE:5078020), partial cds.
gb:BC079819_256134968327.4225-485827-914+3980Xenopus laevis cDNA clone MGC:86486 IMAGE:5512398, complete cds.
gb:AF339477_223761069327.4153-299486-534+31245Babanki virus strain DakAry 251 nonstructural protein 4 gene, partial cds; and structural polyprotein precursor, gene, c
gb:AK129358_206958970327.4276-572209-302+3566Mus musculus mRNA for mKIAA1430 protein.
gb:BC043347_198338871327.4363-57833-111+3886Homo sapiens general transcription factor IIIC, polypeptide 3, 102kDa, mRNA (cDNA clone MGC:49899 IMAGE:5498609), comple
gb:AF465407_190346572327.4363-57833-111+3413Homo sapiens transcription factor IIIC102 short isoform mRNA, complete cds.
gb:AB035727_186640673327.4261-5632252-2347+32506Homo sapiens CACNA1A mRNA for alpha1A-voltage-dependent calcium channel, complete cds, isolate:TMDN-CNT-001.
gb:AK020894_116055374327.4276-572184-277+3288Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930026P06 product:hypothetical protein, full
gb:AK020776_116051675327.4276-572184-277+3318Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430106I12 product:hypothetical protei
gb:AK016776_115888076327.4276-572184-277+3541Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933411K20 product:hypothetical protein,
gb:CP000009_86332877327.4219-392124-187+3187Gluconobacter oxydans 621H, complete genome.
gb:BA000039_72761178327.4273-548357-448+3463Thermosynechococcus elongatus BP-1 DNA, complete genome.
sp|Q60542|TCF8_MESAU79327.4372-572930-996+31043Transcription factor 8 (Zinc finger protein BZP).>pir|A56037|A56037 DNA-binding protein BZP - golden hamster>gb:HAMBZPBP
sp|Q9Y5Q9|T3C3_HUMAN80327.4363-57833-111+3886General transcription factor 3C polypeptide 3 (Transcription factor IIIC-gamma subunit) (TF3C-gamma) (TFIIIC 102 kDa sub
sp|Q8DHW6|SYC_SYNEL81327.4273-548380-471+3486Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA ligase) (CysRS).
gb:XLXFOF_258361882329.6225-485214-301+3354X.laevis XFO 9-3 mRNA for zinc finger protein.
gb:SVU62465_245446783329.6153-29942-90+3113Sindbis virus E2 structural protein (E2) gene, partial cds.
gb:RNU37142_213721584329.6255-569481-591+3883Rattus norvegicus brevican core protein mRNA, complete cds.
gb:BC048937_209988285329.6300-440427-470+3522Mus musculus cDNA sequence BC048937, mRNA (cDNA clone MGC:56984 IMAGE:6396012), complete cds.
gb:AF035263_205175686329.6363-581305-373+3411Mus musculus BAF57 (Baf57) gene, complete cds.>gb:BC047141_2099461 Mus musculus SWI/SNF related, matrix associated, acti
gb:MFTGN47_203906387329.6369-578266-335+3445M.fascicularis mRNA for TGN47 protein.
gb:HUMZIFI_203824088329.6222-452529-605+3622Homo sapiens zinc finger protein mRNA, 3' end.
gb:HSU79666_202627789329.6261-4762253-2318+32505Homo sapiens alpha1A-voltage-dependent calcium channel mRNA, splice form BI-1-Vi-GGCAG, complete cds.
gb:AF004884_187591990329.6261-4762258-2323+32510Homo sapiens neuronal calcium channel alpha 1A subunit isoform A-1 mRNA, complete cds.
gb:CR382127_165991591329.6360-56641-110+3705Yarrowia lipolytica chromosome A of strain CLIB99 of Yarrowia lipolytica.
gb:AX885767_148122092329.6363-57833-111+3129Sequence 1630 from Patent EP1033401.
gb:AY141885_142572593329.6228-569113-221+3334Noctilio albiventris dentin matrix protein 1 (DMP1) gene, partial cds.
gb:AY275181_131516994329.6267-572692-793+3945Caenorhabditis elegans soluble guanylyl cyclase GCY-33 (gcy-33) mRNA, complete cds.>gb:CEC52E4_1361524 Caenorhabditis el
gb:AE017228_41102995329.6402-581145-203+3277Mycobacterium avium subsp. paratuberculosis str. k10, section 2 of 16 of the complete genome.>gb:AE016958_1054433 Mycoba
gb:CR378678_9782696329.696-362330-431+3669Photobacterium profundum SS9 chromosome 2; segment 4/7.
pir|S65086|S6508697329.6225-485214-301+3353finger protein XFO 9-3 - African clawed frog (fragment)
pir|T20156|T2015698329.6267-572694-795+3947hypothetical protein F57F5.2 - Caenorhabditis elegans
pir|A54415|A5441599329.6306-551104-181+3381transcription factor HBP-1a(c14) - wheat>gb:WHTHBP1AC_1727659 Triticum aestivum mRNA for transcription factor HBP-1a(c14
pir|T30841|T30841100329.6162-581892-1043+31231serine-repeat antigen 4 - Plasmodium vivax>gb:PVU51723_1396238 Plasmodium vivax Serine Repeat Antigen (SERA)-Related gen
sp|O00555|CCAA_HUMAN101329.6261-4762253-2318+32505Voltage-dependent P/Q-type calcium channel alpha-1A subunit (Voltage- gated calcium channel alpha subunit Cav2.1) (Calci