Clone JMSF018J01 [sequences]

previous contigF:012029 contigR:012029
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
pir|T04804|T0480411516e-36214-5011-96+111572e-37379-6811-101-2106hypothetical protein F10M23.150 - Arabidopsis thaliana>gb:ATCHRIV65_1546562 Arabidopsis thaliana DNA chromosome 4, conti
gb:AP005583_185447421201e-26214-5011-97+121242e-27391-6811-98-2102Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0406E03.>gb:AP005894_1859790 Oryza sativa (
gb:AY346457_16010353757e-13298-49878-144+13765e-13391-59778-146-2148Solanum chacoense SWIb domain-containing protein mRNA, partial cds.
gb:AC005314_15325574742e-12271-50130-106+14759e-13391-62430-107-2109Arabidopsis thaliana chromosome 2 clone T32F12 map ve016, complete sequence.>gb:AC006068_1533370 Arabidopsis thaliana ch
gb:AP004150_18382175694e-11226-49836-127+15721e-11385-66936-131-2131Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04.>gb:AP004886_1846653 Oryza sativa
pir|B86441|B864419688e-11301-50143-109+16705e-11391-59443-110-2112hypothetical protein F5M6.23 - Arabidopsis thaliana>gb:AE005172_892015 Arabidopsis thaliana chromosome 1, top arm comple
gb:AF387000_17948056695e-11298-49877-143+17681e-10397-59777-143-2144Arabidopsis thaliana putative protein (F10M10.60) mRNA, complete cds.
gb:AY085769_15708357695e-11298-49877-143+18681e-10397-59777-143-2144Arabidopsis thaliana clone 17912 mRNA, complete sequence.
pir|T04775|T047758695e-11298-49877-143+19681e-10397-59777-143-2144hypothetical protein F10M10.60 - Arabidopsis thaliana>gb:ATCHRIV81_1547390 Arabidopsis thaliana DNA chromosome 4, contig
gb:AY088064_157308810654e-10199-49840-139+110674e-10391-69640-141-2143Arabidopsis thaliana clone 40813 mRNA, complete sequence.
gb:ATAC009327_154294511654e-10199-49840-139+111674e-10391-69640-141-2143Arabidopsis thaliana chromosome III BAC T12J13 genomic sequence, complete sequence.>gb:BT003701_1636900 Arabidopsis thal
gb:AC084282_173342612657e-10298-49876-142+112666e-10391-59776-144-2144Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete sequence.
gb:AY088135_157315813649e-10301-49875-140+113643e-09397-59475-140-2141Arabidopsis thaliana clone 41621 mRNA, complete sequence.
gb:AY081276_156862214649e-10301-49875-140+114643e-09397-59475-140-2141Arabidopsis thaliana unknown protein (At2g14880) mRNA, complete cds.>gb:BT001167_1635422 Arabidopsis thaliana unknown pr
pir|E84522|E8452215649e-10301-49875-140+115643e-09397-59475-140-2141hypothetical protein At2g14880 [imported] - Arabidopsis thaliana>gb:AC005396_1532633 Arabidopsis thaliana chromosome 2 c
pir|A96532|A9653216633e-09196-438229-306+116636e-09457-699229-306-2386hypothetical protein F13F21.4 [imported] - Arabidopsis thaliana>gb:AE005173_892888 Arabidopsis thaliana chromosome 1, bo
gb:BX842649_82426017626e-09205-49546-138+117621e-08400-69046-138-2140Bdellovibrio bacteriovorus complete genome, strain HD100; segment 4/11.
pir|S67199|S6719919593e-08283-495124-192+118621e-08388-612124-196-2228hypothetical protein YOR295w - yeast (Saccharomyces cerevisiae)>gb:SCYOR295W_1714539 S.cerevisiae chromosome XV reading
gb:AP000735_182058118593e-08196-438229-307+119597e-08457-699229-307-2452Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K13E13.
pir|A81669|A8166920587e-08283-49513-83+120597e-08391-61213-86-286conserved hypothetical protein TC0745 [imported] - Chlamydia muridarum (strain Nigg)>gb:AE002343_45328 Chlamydia muridar
pir|T41263|T4126321563e-07283-438121-172+121568e-07457-612121-172-2233hypothetical protein SPCC285.17 - fission yeast (Schizosaccharomyces pombe)>gb:SPCC285_1721221 S.pombe chromosome III co
gb:BX640420_80743422541e-06292-49523-90+122552e-06400-60323-90-292Bordetella pertussis strain Tohama I, complete genome; segment 10/12.>gb:BX640449_816859 Bordetella bronchiseptica strai
gb:BX640434_81199924542e-06292-49523-90+125543e-06400-60323-90-292Bordetella parapertussis strain 12822, complete genome; segment 12/14.
gb:AE016994_37423025532e-06274-49511-84+123542e-06391-62111-87-287Chlamydophila caviae GPIC section 1 of 4 of the complete genome.>gb:AE015925_993909 Chlamydophila caviae GPIC complete g
gb:OSJN00091_169473923542e-06265-495153-228+127535e-06400-630153-228-2336Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24, complete sequence.
pir|H71510|H7151026533e-06283-49513-83+126544e-06391-61213-86-286probable swib (ym74) complex protein - Chlamydia trachomatis (serotype D, strain UW3/Cx)>gb:AE001320_34395 Chlamydia tra
gb:BX908798_82988132526e-06256-4958-87+124543e-06388-6398-91-298Parachlamydia-related symbiont UWE25, complete genome.
gb:AE016997_37504230524e-06172-495750-856+129535e-06391-723750-859-2861Chlamydophila caviae GPIC section 4 of 4 of the complete genome.>gb:AE015925_994721 Chlamydophila caviae GPIC complete g
gb:BX908798_82962733526e-06172-495759-864+128535e-06391-723759-867-2867Parachlamydia-related symbiont UWE25, complete genome.
gb:AC090713_173443428524e-06247-411127-181+130528e-06484-648127-181-2303Oryza sativa chromosome 3 BAC OSJNBa0002J24 genomic sequence, complete sequence.
gb:AP003892_183491527524e-06265-495215-290+133521e-05400-630215-290-2406Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02.>gb:AP004190_1838758 Oryza sativa
gb:CR382138_167112229524e-06205-43855-131+131528e-06457-69055-131-2139Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii.
gb:CR382122_165537331526e-06196-4386-86+134521e-05457-6996-86-2124Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis.
sp|Q05024|YM74_YEAST34518e-06196-49596-192+132528e-06385-69996-197-2226Hypothetical 26.5 kDa protein in FUS2-RNH1 intergenic region.>pir|S57600|S57600 hypothetical protein YMR233w - yeast (Sa
gb:AY084955_157003736494e-05283-495309-380+135512e-05391-612309-383-2385Arabidopsis thaliana clone 12272 mRNA, complete sequence.
gb:AY059797_156464137494e-05283-495309-380+136512e-05391-612309-383-2385Arabidopsis thaliana unknown protein (At4g22360) mRNA, complete cds.>gb:AY091266_1574473 Arabidopsis thaliana unknown pr
pir|G86586|G8658638495e-05208-495747-858+137504e-05391-687747-861-2871DNA topoisomerase I-fused to SWI domain [imported] - Chlamydophila pneumoniae (strain J138)>pir|D72038|D72038 DNA topois
gb:AE017343_175552235493e-05289-438177-226+138497e-05457-606177-226-2252Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence.
pir|A71488|A7148840487e-05175-495759-852+139499e-05391-720759-855-2857probable DNA topoisomerase I-fused to SWI domain - Chlamydia trachomatis (serotype D, strain UW3/Cx)>gb:AE001335_34583 C
pir|T04917|T0491739487e-05265-495195-270+143482e-04400-630195-270-2369hypothetical protein T10I14.190 - Arabidopsis thaliana>gb:ATCHRIV57_1546073 Arabidopsis thaliana DNA chromosome 4, conti
gb:U00057_140157041489e-05175-438168-251+141482e-04457-720168-251-2347Caenorhabditis elegans cosmid T24G10, complete sequence.
gb:CR380959_165386444472e-04226-438114-190+140491e-04379-669114-214-2233Candida glabrata strain CBS138 chromosome M complete sequence.
pir|T16937|T1693742489e-05175-438236-319+142482e-04457-720236-319-2415hypothetical protein T24G10.2 - Caenorhabditis elegans
pir|T46204|T4620443471e-04265-50133-112+145473e-04394-63033-112-2205hypothetical protein T8P19.110 - Arabidopsis thaliana>gb:ATT8P19_1556535 Arabidopsis thaliana DNA chromosome 3, BAC clon
pir|H81749|H8174947454e-04181-495761-860+144482e-04391-714761-863-2865DNA topoisomerase I TC0012 [imported] - Chlamydia muridarum (strain Nigg)>gb:AE002270_44610 Chlamydia muridarum Nigg se
gb:AY231844_117713745463e-04244-44148-113+147466e-04454-65148-113-2133Drosophila yakuba clone yak-em_CG1240 mRNA sequence.
gb:AE014296_113441846463e-04286-441173-224+148468e-04454-609173-224-2244Drosophila melanogaster chromosome 3L, complete sequence.>gb:AE003476_1211717 Drosophila melanogaster chromosome 3L, sec
gb:AE016815_174622048440.001220-438108-178+146466e-04388-675108-199-2220Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence.
pir|F86562|F8656249430.002283-49514-84+149440.002391-61214-87-287SWIB (YM74) complex protein [imported] - Chlamydophila pneumoniae (strain J138)>pir|F72061|F72061 swib (ym74) complex pr
gb:AB007650_151024450410.011289-438321-370+151420.011388-606321-392-2534Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA22.>gb:AY065106_1566260 Arabidopsis thaliana unknown protein
gb:AC116984_120738858390.032169-495208-307+150430.007385-726208-312-2456Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.
gb:AF000265_123055251400.014247-477210-291+153410.019400-648210-295-2449Caenorhabditis elegans cosmid C18E3, complete sequence.
pir|T15185|T1518552400.014247-477286-367+154410.019400-648286-371-2525hypothetical protein C18E3.2 - Caenorhabditis elegans
pir|G84540|G8454053400.014361-498176-220+155410.019391-534176-222-2383hypothetical protein At2g16480 [imported] - Arabidopsis thaliana>gb:AC007047_1535065 Arabidopsis thaliana chromosome 2 c
gb:CR380953_165094357390.032211-441106-180+152420.015388-684106-200-2241Candida glabrata strain CBS138 chromosome G complete sequence.
pir|T50184|T5018455400.024175-438177-257+161400.056457-720177-257-2425mammalian swi/snf complex 60 kda subunit homolog [imported] - fission yeast (Schizosaccharomyces pombe)>gb:SPAC23G3_1717
gb:CR382130_166336554400.024289-495182-249+163390.073400-606182-249-2385Yarrowia lipolytica chromosome D of strain CLIB99 of Yarrowia lipolytica.
gb:AF071503_123881265380.093289-501298-369+156410.025355-606298-377-2515Drosophila melanogaster brahma associated protein 60 kDa mRNA, complete cds.
gb:AE014298_112546066380.093289-501298-369+157410.025355-606298-377-2515Drosophila melanogaster chromosome X, complete sequence.>gb:AE003491_1212469 Drosophila melanogaster chromosome X, secti
gb:BC049347_255020256390.032289-486292-356+162390.073409-606292-356-2510Danio rerio SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, mRNA (cDN
gb:AK119040_181698561380.093298-495255-319+159400.056388-597255-323-2458Arabidopsis thaliana At3g01890 mRNA for unknown protein, complete cds, clone: RAFL21-36-K20.
gb:ATAC010797_154316462380.093298-495255-319+160400.056388-597255-323-2442Arabidopsis thaliana chromosome III BAC F28J7 genomic sequence, complete sequence.>gb:ATAC011664_1543363 Arabidopsis tha
gb:CR382399_137494264380.093262-495255-328+158400.043400-633255-328-2830Plasmodium falciparum chromosome 6, complete sequence; segment 2/5.
gb:AF370586_179236959390.042301-498300-370+164390.095397-594300-370-2824Arabidopsis thaliana Unknown protein (At2g18090; T27K22.4) mRNA, complete cds.
pir|B84560|B8456060390.042301-498278-348+166390.095397-594278-348-2802hypothetical protein At2g18090 [imported] - Arabidopsis thaliana>gb:AC006201_1533585 Arabidopsis thaliana chromosome 2 c
gb:AB005234_150934463380.093208-495249-336+167380.16400-687249-336-2571Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK5.
gb:OSJN00176_169622073370.16250-495289-362+165390.095388-645289-366-2512Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D21, complete sequence.
pir|T45743|T4574376370.16310-495285-348+168380.21400-585285-348-21247hypothetical protein F24M12.160 - Arabidopsis thaliana>gb:ATF24M12_1549951 Arabidopsis thaliana DNA chromosome 3, BAC cl
gb:MUSD15KZL_212565167370.16289-486294-358+169370.36409-606294-358-2461Mus musculus D15Kzl mRNA, 3' end.
gb:MMU66620_212314168370.16289-486258-322+170370.36409-606258-322-2475Mus musculus SWI/SNF complex 60 KDa subunit (BAF60a) mRNA, complete cds.
gb:BC079839_210766369370.16289-486290-354+171370.36409-606290-354-2508Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, mRNA (cD
gb:BC026783_209554670370.16289-486279-343+172370.36409-606279-343-2497Mus musculus, clone IMAGE:4481097, mRNA, partial cds.
gb:BC009368_197194471370.16289-486297-361+173370.36409-606297-361-2515Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, mRNA (cD
gb:AF109733_188420072370.16289-486235-299+174370.36409-606235-299-2453Homo sapiens SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin D1 (SMARCD1) mRNA, complete cds.
gb:AK075611_117090474370.16289-48687-151+175370.36409-60687-151-2305Mus musculus adult male brain cDNA, RIKEN full-length enriched library, clone:0710008A09 product:SWI/SNF related, matrix
pir|A30222|A3022275370.16289-486294-358+176370.36409-606294-358-2461hypothetical D15Kz1 protein - mouse (fragment)
sp|Q61466|SCD1_MOUSE77370.16289-486258-322+177370.36409-606258-322-2476SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily D member 1 (SWI/SNF complex 60 kDa
sp|Q96GM5|SCD1_HUMAN78370.16289-486258-322+178370.36409-606258-322-2476SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily D member 1 (SWI/SNF complex 60 kDa
gb:BC081086_256199479370.21289-486286-350+179370.47409-606286-350-2504Xenopus laevis similar to SWI/SNF related, mRNA (cDNA clone IMAGE:3402691), partial cds.
gb:BC077955_256060180370.21289-486295-359+180370.47409-606295-359-2513Xenopus laevis similar to SWI/SNF related, mRNA (cDNA clone IMAGE:5516170), partial cds.
gb:BC074701_255819481370.21289-486290-354+181370.47409-606290-354-2508Xenopus tropicalis MGC69403 protein, mRNA (cDNA clone MGC:69403 IMAGE:5335418), complete cds.
gb:BC045009_254896782370.21289-486263-327+182370.47409-606263-327-2481Xenopus laevis similar to SWI/SNF related, mRNA (cDNA clone IMAGE:5542448), partial cds.
gb:HSU66617_202558683370.21289-486258-322+187370.47409-606258-322-2435Human SWI/SNF complex 60 KDa subunit (BAF60a) mRNA, alternatively spliced, complete cds.
gb:BC005732_209011985360.35289-486238-302+183370.47388-606238-311-2456Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, mRNA (cD
gb:AB003505_204323786360.35289-486313-377+184370.47388-606313-386-2531Rattus norvegicus gene for BAF60b, complete cds.>gb:BC062063_2104838 Rattus norvegicus SWI/SNF related, matrix associate
gb:AB003504_204323687360.35289-486251-315+185370.47388-606251-324-2469Rattus norvegicus mRNA for BAF60b, partial cds.
gb:HSU66618_202558788360.35289-486257-321+186370.47388-606257-330-2475Human SWI/SNF complex 60 KDa subunit (BAF60b) mRNA, complete cds.
pir|JC6508|JC650889360.35289-486313-377+188370.47388-606313-386-2531brahma related gene associated factor BAF60 b protein - rat
gb:BC081255_256215184360.35289-438247-296+189360.62388-606247-320-2465Xenopus laevis MGC86299 protein, mRNA (cDNA clone MGC:86299 IMAGE:3403550), complete cds.
pir|T27696|T2769699350.60301-486231-291+191360.80385-594231-299-2446hypothetical protein ZK1128.5 - Caenorhabditis elegans>gb:CEZK1128_1371455 Caenorhabditis elegans cosmid ZK1128, complet
gb:BT007694_215062690350.60289-438252-301+192351.4457-606252-301-2471Synthetic construct Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d
gb:BC085349_210921091350.60289-438252-301+193351.4457-606252-301-2470Rattus norvegicus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 (pre
gb:BC060525_210401392350.60289-438265-314+194351.4457-606265-314-2483Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, mRNA (cD
gb:BC013122_209170693350.60289-438163-212+195351.4457-606163-212-2381Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, mRNA (cD
gb:HSU66619_202558894350.60289-438251-300+196351.4457-606251-300-2469Human SWI/SNF complex 60 KDa subunit (BAF60c) mRNA, complete cds.
gb:AF204951_2214225101341.0193-501374-476+190360.62379-702374-481-2518Ectocarpus siliculosus virus, complete genome.
gb:AY450431_195080195350.60289-438252-301+197351.4457-606252-301-2470Homo sapiens 60kDa BRG-1/Brm associated factor subunit c isoform 1 (SMARCD3) mRNA, complete cds.>gb:BC002628_1968271 Hom
gb:AY450430_195080096350.60289-438265-314+198351.4457-606265-314-2483Homo sapiens 60kDa BRG-1/Brm associated factor subunit c isoform 2 (SMARCD3) mRNA, complete cds.
gb:AK019374_116003197350.60289-4386-55+199351.4457-6066-55-2224Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010003D15 product:SWI/SNF related, mat
gb:AK005094_115281898350.60289-438163-212+1100351.4457-606163-212-2381Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500001J14 product:SWI/SNF related, m
gb:BC064862_2553903100341.0355-456420-453+1101342.3439-540420-453-2588Xenopus tropicalis hypothetical protein MGC76058, mRNA (cDNA clone MGC:76058 IMAGE:5307463), complete cds.
gb:AC005486_1874948102341.3289-423252-296+1103343.1472-606252-296-2300Homo sapiens PAC clone RP5-1070G24 from 7, complete sequence.
gb:AE014188_968158103341.3268-462238-306+1104343.1433-627238-306-2425Plasmodium falciparum 3D7 chromosome 12, complete sequence.>gb:AE014850_1229550 Plasmodium falciparum 3D7 chromosome 12,
gb:AP005966_1860372104332.3253-462539-607+1105335.2433-642539-607-2837Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1047H05.
gb:BT010262_1357553105333.0247-45972-142+1107336.8436-64872-142-2239Drosophila melanogaster RE28434 full insert cDNA.
gb:AE014296_1136614106333.0247-459334-404+1108336.8436-648334-404-2598Drosophila melanogaster chromosome 3L, complete sequence.>gb:AE003526_1214035 Drosophila melanogaster chromosome 3L, sec
gb:AB018110_1513762108323.9355-49856-106+1106335.2397-54056-106-2581Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19M13.
gb:AB115081_13988102342.3197-523375-478+2661Xanthomonas oryzae pv. oryzae hrp gene cluster, complete cds.>gb:AE013598_293775 Xanthomonas oryzae pv. oryzae KACC10331
gb:AE014185_937866107333.0151-408249-344+1702Plasmodium falciparum 3D7 chromosome 10 complete sequence.>gb:AE014833_1228600 Plasmodium falciparum 3D7 chromosome 10 s
gb:AE016959_1020602109325.1139-471720-837+11190Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence.>gb:AC069324_1540832 Oryza sativa chromosome 10
gb:AE014188_968040110325.1154-41770-171+1799Plasmodium falciparum 3D7 chromosome 12, complete sequence.>gb:AE014847_1229432 Plasmodium falciparum 3D7 chromosome 12,
gb:AF384969_1794544111326.6253-414113-166+1628Arabidopsis thaliana somatic embryogenesis receptor-like kinase 2 (SERK2) mRNA, complete cds.
gb:CR382126_1658593112326.6256-402386-436+1441Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:AF247769_1255263113326.6139-441358-452+1785Drosophila melanogaster Toll-3 mRNA, partial cds.
gb:AE014297_1138329114326.6139-441284-378+1711Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003672_1220233 Drosophila melanogaster chromosome 3R, sec
gb:AP006627_563906115326.6193-31210-49+1219Bacillus clausii KSM-K16 DNA, complete genome.
pir|D86466|D86466116326.6253-414113-166+162869.4K hypothetical protein F23M19.11 - Arabidopsis thaliana>gb:AE005172_892224 Arabidopsis thaliana chromosome 1, top ar
gb:BC087701_2110170117318.7355-465402-438+1570Rattus norvegicus cDNA clone MGC:105736 IMAGE:7314085, complete cds.
gb:AE014296_1136612118318.7247-402385-436+11146Drosophila melanogaster chromosome 3L, complete sequence.>gb:AE003526_1214033 Drosophila melanogaster chromosome 3L, sec