Clone JMSF009I24 [sequences]

previous contigF:000459 contigR:012230
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AC002337_15304681893e-1751-2391-60+311702e-41200-742562-751-2760Arabidopsis thaliana chromosome 2 clone T8I13 map CIC06C03, complete sequence.>gb:AY057700_1564112 Arabidopsis thaliana
pir|H84913|H849132893e-1751-2391-60+321696e-41221-742562-729-2748probable ATP-dependent RNA helicase [imported] - Arabidopsis thaliana
gb:BC043036_20987763712e-11206-742468-637-2810Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, mRNA (cDNA clone MGC:57931 IMAGE:5698965), complete cds.
gb:AK049311_11687234712e-11206-742468-637-2810Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330021I11 product:RNA HELICASE-RELATED PROTEIN ho
gb:AK007805_11542085712e-11206-74285-254-2427Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810047H21 product:RNA HELICASE-RE
gb:BC078667_19897036703e-11191-742568-741-2919Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, mRNA (cDNA clone IMAGE:6107393), partial cds.
gb:AF083255_18816137703e-11191-742468-641-2709Homo sapiens RNA helicase-related protein mRNA, complete cds.
gb:AB036090_18664198703e-11191-742587-760-2938Homo sapiens mRNA for RNA helicase-related protein, complete cds.
gb:AX877903_14772099703e-11191-74256-229-2407Sequence 12808 from Patent EP1074617.
gb:HSM800178_118575910703e-11191-74214-187-2365Homo sapiens mRNA; cDNA DKFZp586A0419 (from clone DKFZp586A0419).
gb:CR860187_118427411703e-11191-742587-760-2942Pongo pygmaeus mRNA; cDNA DKFZp469C101 (from clone DKFZp469C101).
pir|T08745|T0874512703e-11191-742468-641-2819probable RNA helicase - human>gb:BC015505_1975135 Homo sapiens, RNA helicase-related protein, clone MGC:9119 IMAGE:39056
gb:BC043977_254838813666e-10191-742584-799-2947Xenopus laevis DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, mRNA (cDNA clone MGC:54025 IMAGE:5571594), complete cds.
gb:AE014296_113572914604e-08584-742603-654-2791Drosophila melanogaster chromosome 3L, complete sequence.>gb:AE003547_1214981 Drosophila melanogaster chromosome 3L, sec
pir|T19974|T1997415604e-08320-742599-736-2811hypothetical protein C46F11.4 - Caenorhabditis elegans>gb:CEC46F11_1361288 Caenorhabditis elegans cosmid C46F11, complet
gb:AY058515_129166916497e-05605-742302-346-2680Drosophila melanogaster LD21880 full length cDNA.
gb:AE014298_112573017497e-05605-742846-890-21224Drosophila melanogaster chromosome X, complete sequence.>gb:AE003498_1212739 Drosophila melanogaster chromosome X, secti
gb:BC026492_209537118491e-04605-742302-346-2626Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, mRNA (cDNA clone MGC:31579 IMAGE:4505095), complete cds.
gb:AK129220_206945119491e-04605-742720-764-21044Mus musculus mRNA for mKIAA0801 protein.
gb:BC012304_197353920491e-04605-742708-752-21031Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, mRNA (cDNA clone MGC:9936 IMAGE:3873814), complete cds.
gb:AF106680_188401821491e-04605-742707-751-21031Homo sapiens RNA helicase mRNA, complete cds.
gb:AB018344_186498722491e-04605-742734-778-21058Homo sapiens mRNA for KIAA0801 protein, partial cds.
gb:ATH010470_155190323491e-04605-742119-163-2187Arabidopsis thaliana mRNA for DEAD box RNA helicase, RH20.
gb:AC027034_153978824491e-04605-74287-131-2155Arabidopsis thaliana chromosome 1 BAC F7A10 genomic sequence, complete sequence.
gb:CR860553_118461725491e-04605-742708-752-21032Pongo pygmaeus mRNA; cDNA DKFZp459D167 (from clone DKFZp459D167).
pir|A57514|A5751426491e-04605-742708-752-21032RNA helicase HEL117 - rat>gb:RNU25746_2137064 Rattus norvegicus RNA helicase with arginine-serine-rich domain mRNA, comp
pir|T51345|T5134527491e-04605-742119-163-2187RNA helicase RH20 [imported] - Arabidopsis thaliana (fragment)
pir|B96593|B9659328491e-04605-742433-477-2501probable ethylene-responsive RNA helicase, [imported] - Arabidopsis thaliana>gb:AE005173_893398 Arabidopsis thaliana chr
gb:AE016819_174875629482e-04611-742460-502-2535Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence.
gb:CR382123_165615630482e-04614-742429-470-2504Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:AF096248_176780431473e-04614-742403-444-2474Lycopersicon esculentum ethylene-responsive RNA helicase (ER68) mRNA, complete cds.
gb:DDHEL2A_137691832473e-04605-742358-402-2582D.discoideum Hel2A mRNA for RNA helicase.
gb:AC115598_120580633473e-04605-742845-889-21151Dictyostelium discoideum chromosome 2 map 581427-735498 strain AX4, complete sequence.
pir|S53814|S5381434473e-04605-742358-402-2582DEAD box protein - slime mold (Dictyostelium discoideum) (fragment)
gb:AP004225_183894435474e-04587-742274-324-2583Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1156H12.
gb:AP004225_183894336474e-04587-742483-533-2792Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1156H12.
gb:ATH010458_155189137468e-04611-742329-371-2411Arabidopsis thaliana mRNA for DEAD box RNA helicase, RH5.
pir|A86444|A8644438468e-04611-742455-497-2537probable RNA helicase [imported] - Arabidopsis thaliana>gb:AE005172_892038 Arabidopsis thaliana chromosome 1, top arm co
pir|T51739|T5173939468e-04611-742329-371-2411RNA helicase RH5 [imported] - Arabidopsis thaliana (fragment)
gb:AP006529_186224940450.001614-742431-472-2512Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1114D08.
gb:CR380954_165119941450.001611-742465-507-2540Candida glabrata strain CBS138 chromosome H complete sequence.
gb:ATAC011623_154331442450.001590-742768-817-21088Arabidopsis thaliana chromosome III BAC F24P17 genomic sequence, complete sequence.
gb:AB110202_152691543450.001614-742327-368-2408Oryza sativa (japonica cultivar-group) mRNA for RNA helicase, partial cds, clone: pNS-FP40.
sp|P20447|DBP3_YEAST44450.001611-742448-490-2523Probable ATP-dependent RNA helicase DBP3 (Helicase CA3).>pir|S30805|S30805 probable RNA helicase CA3 - yeast (Saccharomy
gb:AE017346_175727245450.001587-742432-482-2527Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence.
gb:AE017346_175727146450.001587-742445-495-2540Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence.
gb:AB008265_151039547450.001590-742472-521-2564Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDC12.
gb:BC067878_198754348440.002602-742556-601-2631Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 53, mRNA (cDNA clone MGC:87571 IMAGE:5295819), complete cds.
gb:AP003244_182612349440.002632-742399-434-2521Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0419B01.
sp|P46942|DB10_NICSY50440.004590-742478-527-2607RNA helicase-like protein DB10.>pir|S42639|S42639 ATP-dependent RNA helicase DB10 - wood tobacco>gb:TOBRDB10_1725530 Tob
gb:AE014296_113505651430.005590-742493-542-2818Drosophila melanogaster chromosome 3L, complete sequence.>gb:AE003560_1215592 Drosophila melanogaster chromosome 3L, sec
gb:SPP68_172197452420.015602-742458-503-2550Schizosaccharomyces pombe p68 gene for p68 protein.
sp|P24782|DBP2_SCHPO53420.015602-742458-503-2550P68-like protein.>pir|T40810|S14048 RNA helicase dbp2 [similarity] - fission yeast (Schizosaccharomyces pombe)>gb:SPBP8B
pir|T22917|T2291754410.020602-742465-510-2561probable ATP-dependent RNA helicase F58E10.3 [similarity] - Caenorhabditis elegans>gb:CEF58E10_1364777 Caenorhabditis el
sp|Q10202|YBX6_SCHPO55400.045614-742505-546-2578Putative ATP-dependent RNA helicase C17D1.06.>pir|T39709|S67386 probable ATP-dependent RNA helicase - fission yeast (Sc
gb:AY437485_132635056400.058602-742435-480-2544Leishmania major Hel61 gene, complete cds.
gb:AE014297_113841957390.100587-742618-673-2703Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003677_1220412 Drosophila melanogaster chromosome 3R, sec
gb:AE014298_112471058390.13602-742580-625-2945Drosophila melanogaster chromosome X, complete sequence.>gb:AE003442_1209892 Drosophila melanogaster chromosome X, secti
gb:AY236870_193996259380.17218-454209-288-2701Homo sapiens MUC19 mRNA, partial cds.
gb:AK093065_191385760380.17218-454106-185-2280Homo sapiens cDNA FLJ35746 fis, clone TESTI2004399, moderately similar to APOMUCIN.
gb:AP003416_182918061380.17602-742490-535-2571Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05.>gb:AP003436_1829360 Oryza sativa (
gb:TBU86382_139949162380.17602-742460-505-2546Trypanosoma brucei mitochondrial DEAD box protein (mHel61) mRNA, nuclear gene encoding mitochondrial protein, complete c
gb:CR382133_166685963380.22611-742441-483-2536Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii.
gb:AE017342_175485364370.29602-742745-790-21072Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence.
gb:BX842635_164409865370.29605-742900-944-21194Neurospora crassa DNA linkage group I BAC contig B12J7.
gb:AY466159_160803266370.29602-742484-529-2566Zea mays DEAD box RNA helicase (DRH1) mRNA, complete cds.
gb:CNS07EGF_137388467370.38605-742420-465-2495chromosome VIII of strain GB-M1 of Encephalitozoon cuniculi (Microspora).
gb:SCCXIV38K_170742668370.50611-742450-492-2547S.cerevisiae 37,800 bp segment of chromosome XIV.
gb:AF110007_124194369370.50599-742483-529-2618Molgula oculata p68 RNA helicase (bobcat) and transcription factor (manx) genes, complete cds.>gb:AF110009_1241946 Molgu
gb:AF045641_123626370370.50614-742641-683-2970Caenorhabditis elegans cosmid F53H1, complete sequence.
gb:AF045641_123626271370.50614-742641-683-2747Caenorhabditis elegans cosmid F53H1, complete sequence.
sp|P24783|DBP2_YEAST72370.50611-742449-491-2546P68-like protein.>pir|S13757|S13757 RNA helicase DBP2 - yeast (Saccharomyces cerevisiae)>gb:SCP68_1709032 S.cerevisiae p
gb:CR380958_165323773360.65611-742446-488-2544Candida glabrata strain CBS138 chromosome L complete sequence.
gb:CR548612_137532474360.65608-742840-883-21157Paramecium tetraurelia macronuclear largest chromosome, complete sequence.
gb:AF110008_124194575360.84599-742485-531-2619Molgula occulta p68 RNA helicase (bobcat) gene, complete cds.
gb:AC116986_120747776360.84596-742529-576-2668Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.
gb:BC047981_254997177351.1584-742426-477-2607Xenopus laevis similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA helicase, 68kDa), mRNA (cDNA clone MGC:537
gb:BC082849_256292578351.4584-742428-479-2608Xenopus laevis p68 RNA helicase, mRNA (cDNA clone MGC:81559 IMAGE:6862986), complete cds.
gb:BC063223_255349579351.4584-742428-479-2609Xenopus tropicalis hypothetical protein MGC76265, mRNA (cDNA clone MGC:76265 IMAGE:5379210), complete cds.
gb:CR382131_166459980351.4605-742452-496-2552Yarrowia lipolytica chromosome E of strain CLIB99 of Yarrowia lipolytica.
gb:CR382129_166152781351.4620-742753-792-2974Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica.
gb:AF218580_248065282351.9584-742428-479-2608Xenopus laevis p68 RNA helicase mRNA, complete cds.
pir|JC7831|JC783183351.9602-730554-600-2630cancer-associated CAGE protein - human>gb:AY039237_1934831 Homo sapiens DEAD-box protein CAGE (CAGE) mRNA, complete cds.
gb:BC080992_256190284342.5605-742418-462-2610Xenopus laevis hypothetical protein LOC398649, mRNA (cDNA clone MGC:80019 IMAGE:3401294), complete cds.
gb:BC014442_197460985343.2185-490343-442-2462Homo sapiens hypothetical nuclear factor SBBI22, mRNA (cDNA clone MGC:22964 IMAGE:4866321), complete cds.
gb:AY700082_134693886343.2602-742463-513-2516Plasmodium falciparum DEAD box DNA helicase gene, complete cds.
gb:AE014296_113460387343.2215-4759-90-21823Drosophila melanogaster chromosome 3L, complete sequence.>gb:AE003479_1211902 Drosophila melanogaster chromosome 3L, sec
gb:AE014298_112579088343.2218-4843198-3285-25146Drosophila melanogaster chromosome X, complete sequence.>gb:AE003500_1212799 Drosophila melanogaster chromosome X, secti
gb:AE014188_96806989343.2602-742689-739-2742Plasmodium falciparum 3D7 chromosome 12, complete sequence.>gb:AE014848_1229461 Plasmodium falciparum 3D7 chromosome 12,
sp|Q8MSX1|ENC_DROME90343.2215-4759-90-21818Encore protein.>gb:AE014296_1134604 Drosophila melanogaster chromosome 3L, complete sequence.>gb:AE003479_1211903 Drosop
gb:AE016827_3432673331.387-212331-370+3384Mannheimia succiniciproducens MBEL55E, complete genome.
gb:AF399010_126817291334.2605-739433-478-2554Giardia intestinalis strain WB1267 DEAD-box RNA helicase gene, complete cds.
gb:BC067585_255476292335.5590-742432-481-2496Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, mRNA (cDNA clone MGC:85704 IMAGE:6963939), complete cds.
gb:BT009872_215126093335.5605-742428-472-2651Synthetic construct Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 17, 72kDa mRNA, partial cds.
gb:BC027758_209609294335.5605-74246-90-2270Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, transcript variant 3, mRNA (cDNA clone IMAGE:5345465), complete
gb:CR456432_199272395335.5605-742428-472-2652Homo sapiens DDX17 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.DDX17).
gb:AY369802_194818196335.5605-74219-63-2241Pan troglodytes DEAD box polypeptide 17 (DDx17) mRNA, partial cds.>gb:AY369803_1948182 Macaca mulatta DEAD box polypepti
gb:AB064993_186965397335.5185-490343-442-2462Macaca fascicularis mRNA for hypothetical nuclear factor SBBI22, complete cds.
gb:HSM803020_118687098335.5605-742430-474-2652Homo sapiens mRNA; cDNA DKFZp761H2016 (from clone DKFZp761H2016).
gb:CR857669_118188799335.5605-74225-69-2247Pongo pygmaeus mRNA; cDNA DKFZp469I2317 (from clone DKFZp469I2317).
gb:AL646081_549173100335.5254-48763-138-2667Ralstonia solanacearum GMI1000 megaplasmid, complete sequence; segment 6/11.
pir|B97108|B97108101335.5590-730329-374-2406collagenase family protease [imported] - Clostridium acetobutylicum>gb:AE007678_229014 Clostridium acetobutylicum ATCC 8
sp|Q92841|DD17_HUMAN102335.5605-742428-472-2650Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17).>pir|S72367|S72367 ATP-dependent RNA he
gb:AY091050_1574278103337.2593-712479-522-2522Arabidopsis thaliana putative ATP-dependent RNA helicase (At2g28600) mRNA, partial cds.
gb:AY543688_1334476104337.2614-74225-66-266Balanus glandula helicase mRNA, partial cds.
gb:CR858161_1182348105337.2185-490343-442-2462Pongo pygmaeus mRNA; cDNA DKFZp468P1223 (from clone DKFZp468P1223).
gb:AE014185_937785106337.2596-742571-619-2680Plasmodium falciparum 3D7 chromosome 10 complete sequence.>gb:AE014832_1228519 Plasmodium falciparum 3D7 chromosome 10 s
gb:AE016822_341120107337.2620-742342-381-2399Leifsonia xyli subsp. xyli str. CTCB07, complete genome.
pir|H84686|H84686108337.2593-712459-502-2502probable ATP-dependent RNA helicase [imported] - Arabidopsis thaliana>gb:AC007171_1535470 Arabidopsis thaliana chromosom
gb:AC019018_15385024322.9141-22433-62+3996Arabidopsis thaliana chromosome 1 BAC F14G24 genomic sequence, complete sequence.
gb:SCO939129_1804745323.8127-237297-334-3597Streptomyces coelicolor A3(2) complete genome; segment 26/29.
gb:AY391418_2531554109329.3590-742432-481-2518Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (DDX5) mRNA, complete cds.
gb:AF242524_1892552110329.3188-490343-440-2444Homo sapiens hypothetical nuclear factor SBBI22 mRNA, complete cds.
gb:CR382129_1661481111329.3212-4841062-1155-22174Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica.
gb:CR382126_1658389112329.3614-742505-546-2627Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:DDU66524_1377385113329.3218-47848-133-2285Dictyostelium discoideum ORFveg158 mRNA, partial cds.
sp|P43742|DNAA_HAEIN114329.3257-46391-168-2454Chromosomal replication initiator protein dnaA.>pir|B64107|B64107 replication initiation protein dnaA - Haemophilus infl
gb:CR382134_16673896316.542-1821-46-1392Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii.