Clone JMFS158H09 [sequences]

previous contigF:003709 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
sp|P31542|CLAB_LYCES11262e-2864-4291-118+1923ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplast precursor.>pir|B35905|B35905 endopeptidase
sp|P31541|CLAA_LYCES21161e-2561-4291-120+1926ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplast precursor.>pir|A35905|A35905 endopeptidase
gb:AF043539_176374531092e-2364-4291-117+1891Spinacia oleracea ClpC protease (clpC) mRNA, chloroplast gene encoding chloroplast protein, complete cds.
sp|P35100|CLPA_PEA4992e-2064-4291-118+1922ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor.>pir|S31164|S31164 endopeptidase Clp
gb:AB017063_15133345962e-1970-4296-121+1929Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7.>gb:AY102125_1577730 Arabidopsis thaliana AT5g50920/K3K7_
pir|T52292|T522926932e-1870-4296-120+1928endopeptidase Clp (EC 3.4.21.92) ATP-binding chain C, chloroplast [imported] - Arabidopsis thaliana>gb:AF022909_1762028
gb:AY056787_15638367786e-14172-42956-141+1558Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, complete cds.
pir|T49283|T492838786e-14172-42956-141+1952AtClpC - Arabidopsis thaliana>gb:AX765872_1474625 Sequence 81 from Patent WO03008440.>gb:ATT21J18_1555142 Arabidopsis th
pir|T52456|T524569786e-14172-42956-141+1952endopeptidase Clp ATP-binding chain C [imported] - Arabidopsis thaliana>gb:AB022324_1515222 Arabidopsis thaliana mRNA fo
pir|S37557|S3755710702e-11235-4294-68+1874endopeptidase Clp ATP-binding chain A, chloroplast - rape (fragment)
sp|P46523|CLPA_BRANA11702e-11235-4294-68+1874ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor (Fragment).>gb:BNCLPA_1633519 B.napus
gb:OSJN00240_169723712686e-11178-4291-84+1888Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence.
gb:AP008231_58094813602e-08340-42914-43+1839Synechococcus elongatus PCC 6301 DNA, complete genome.
pir|S71553|S7155314602e-08340-42914-43+1839endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity] - Synechococcus sp. (strain PCC 7942)>gb:SSU16134_19
pir|AH2180|AH218015602e-08343-42916-44+1839endopeptidase Clp ATP-binding chain [imported] - Nostoc sp. (strain PCC 7120)>gb:BA000019_683988 Nostoc sp. PCC 7120 DN
sp|Q9TM05|CLPC_CYACA16594e-08340-42930-59+1854ATP-dependent Clp protease ATP-binding subunit clpA homolog.>gb:AF022186_1761876 Cyanidium caldarium strain RK1 chloropl
gb:AY673996_162140817586e-08346-4291-28+1823Gracilaria tenuistipitata var. liui chloroplast, complete genome.
gb:AB002583_150880718586e-08346-4291-28+1821Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D.
gb:BX572098_79840319586e-08346-4291-28+1859Prochlorococcus marinus MIT9313 complete genome; segment 4/7.
gb:BX572092_79671420586e-08346-4291-28+1842Prochlorococcus marinus MED4 complete genome; segment 3/5.
gb:BX569691_77584021586e-08346-4291-28+1846Synechococcus sp. WH8102 complete genome; segment 3/7.
gb:BA000045_74213922586e-08346-4291-28+1819Gloeobacter violaceus PCC 7421 DNA, complete genome.
gb:BA000039_72609223586e-08346-4291-28+1824Thermosynechococcus elongatus BP-1 DNA, complete genome.
gb:AE017164_39556324586e-08346-4291-28+1856Prochlorococcus marinus subsp. marinus str. CCMP1375 section 4 of 6 of the complete genome.>gb:AE017126_1031232 Prochlor
pir|S76330|S7633025586e-08346-4291-28+1821endopeptidase Clp (EC 3.4.21.-) ATP-binding chain C [similarity] - Synechocystis sp. (strain PCC 6803)>gb:BA000022_68957
sp|P51332|CLPC_PORPU26586e-08346-4291-28+1821ATP-dependent Clp protease ATP-binding subunit clpA homolog.>pir|S73253|S73253 endopeptidase Clp (EC 3.4.21.-) ATP-bindi
sp|O78410|CLPC_GUITH27586e-08346-4291-28+1819ATP-dependent Clp protease ATP-binding subunit clpA homolog.>gb:AF041468_1763464 Guillardia theta complete plastid genom
gb:BA000045_74214328572e-07346-4291-28+1330Gloeobacter violaceus PCC 7421 DNA, complete genome.
pir|AE2051|AE205129533e-06346-4291-28+1814endopeptidase Clp ATP-binding chain [imported] - Nostoc sp. (strain PCC 7120)>gb:BA000019_682952 Nostoc sp. PCC 7120 DN
sp|P49574|CLPC_ODOSI30523e-06346-4291-28+1885ATP-dependent Clp protease ATP-binding subunit clpA homolog.>pir|S78246|S78246 endopeptidase Clp (EC 3.4.21.-) ATP-bindi
pir|T47485|T4748531524e-06346-4261-27+1341clpC-like protein - Arabidopsis thaliana>gb:ATF9K21_1551403 Arabidopsis thaliana DNA chromosome 3, BAC clone F9K21.
gb:AE016850_34858932454e-04346-4295-32+1840Tropheryma whipplei str. Twist, section 1 of 3 of the complete genome.>gb:BX251410_764289 Tropheryma whipplei TW08/27, c
gb:AE000516_2383133455e-04346-4291-28+1848Mycobacterium tuberculosis CDC1551, complete genome.
gb:AX065707_145976734440.001346-4291-28+1327Sequence 51 from Patent WO0100842.
gb:BA000036_72040535440.001346-4291-28+1925Corynebacterium glutamicum ATCC 13032 DNA, complete genome.>gb:BX927156_834211 Corynebacterium glutamicum ATCC 13032, IS
gb:BA000035_71731036440.001346-4291-28+1927Corynebacterium efficiens YS-314 DNA, complete genome.
gb:BX248359_76324837440.001346-4296-33+1883Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 6/8.
gb:BA000030_70258438440.001346-4291-28+1841Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
gb:BA000030_70048639440.001346-4291-28+1842Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
gb:AP006618_55680640440.001346-4291-28+1851Nocardia farcinica IFM 10152 DNA, complete genome.
gb:AE017228_41116641440.001346-4291-28+1843Mycobacterium avium subsp. paratuberculosis str. k10, section 2 of 16 of the complete genome.>gb:AE016958_1054570 Mycoba
gb:MSGA15AGA_15037842440.001346-4291-28+197M.leprae antigen 15 kDa gene, complete cds.
gb:MLPUTATP_14877643440.001346-4291-28+1649Mycobacterium leprae DNA for putative atp operon.
pir|T36384|T3638444440.001346-4291-28+1841probable ATP-binding proteinase - Streptomyces coelicolor>gb:SCO939116_177046 Streptomyces coelicolor A3(2) complete gen
pir|S11163|S1116345440.001346-4291-28+1649endopeptidase Clp ATP-binding chain C - Mycobacterium leprae (fragment)
sp|O06286|CLPC_MYCTU46440.001346-4291-28+1848Probable ATP-dependent Clp protease ATP-binding subunit.>pir|E70954|E70954 endopeptidase Clp (EC 3.4.21.-) ATP-binding c
sp|P24428|CLPC_MYCLE47440.001346-4291-28+1848Probable ATP-dependent Clp protease ATP-binding subunit.>pir|C86938|C86938 probable ATP-dependent Clp proteinase [import
gb:AE014295_31074948440.002346-4291-28+1869Bifidobacterium longum NCC2705, complete genome.
gb:AE016822_34105649430.003346-4291-28+1839Leifsonia xyli subsp. xyli str. CTCB07, complete genome.
gb:AE017333_44604050420.005346-4232-27+1810Bacillus licheniformis DSM 13, complete genome.>gb:CP000002_855863 Bacillus licheniformis ATCC 14580, complete genome.>g
sp|P37571|CLPC_BACSU51420.005346-4232-27+1810Negative regulator of genetic competence clpC/mecB.>pir|I40508|I40508 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain
gb:BA000043_73665552420.006346-4232-27+1810Geobacillus kaustophilus HTA426 DNA, complete genome.
gb:AE017283_43006853420.006346-4291-28+1844Propionibacterium acnes KPA171202, complete genome.
pir|G83662|G8366254420.006346-4232-27+1813class III stress response-related ATPase clpC [imported] - Bacillus halodurans (strain C-125)>gb:BA000004_654049 Bacillu
gb:BA000028_69448055400.013346-4232-27+1809Oceanobacillus iheyensis HTE831 DNA, complete genome.
gb:OSJN00288_169800956400.017175-4293-97+1877Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02, complete sequence.
gb:AE013175_28989357400.017343-4292-30+1816Thermoanaerobacter tengcongensis MB4, section 202 of 244 of the complete genome.>gb:AE008691_1111958 Thermoanaerobacter
gb:CP000001_85071358400.023346-4232-27+1811Bacillus cereus ZK, complete genome.
gb:AP006840_57031959400.023346-4291-28+1833Symbiobacterium thermophilum DNA, complete genome.
gb:AE017024_38037760400.023346-4232-27+1811Bacillus anthracis str. Ames section 1 of 18 of the complete genome.>gb:AE017225_405494 Bacillus anthracis str. Sterne,
gb:AE016998_37514061400.023346-4232-27+1811Bacillus cereus ATCC 14579 section 1 of 18 of the complete genome.>gb:AE016877_1015390 Bacillus cereus ATCC 14579 comple
gb:AP004777_184491562390.050340-42971-100+1938Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05.
gb:AY166599_158618163390.050340-42971-100+1938Oryza sativa (indica cultivar-group) ATP-dependent Clp protease ATP-binding subunit precursor (CLPD1) mRNA, complete cds
gb:AE016995_37441864380.066346-4291-28+1846Chlamydophila caviae GPIC section 2 of 4 of the complete genome.>gb:AE015925_994097 Chlamydophila caviae GPIC complete g
pir|G72079|G7207965380.066346-4291-28+1845endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity] - Chlamydophila pneumoniae (strain CWL029)>gb:AE0016
sp|O84288|CLPC_CHLTR66380.066346-4291-28+1854Probable ATP-dependent Clp protease ATP-binding subunit.>pir|C71533|C71533 endopeptidase Clp (EC 3.4.21.-) ATP-binding c
sp|Q9Z8A6|CLPC_CHLPN67380.066346-4291-28+1845Probable ATP-dependent Clp protease ATP-binding subunit.>pir|G81590|G81590 ATP-dependent Clp proteinase, ATP-binding cha
sp|Q9PKA8|CLPC_CHLMU68380.066346-42917-44+1870Probable ATP-dependent Clp protease ATP-binding subunit.>pir|B81689|B81689 ATP-dependent Clp proteinase, ATP-binding cha
pir|H72404|H7240469380.086346-4291-28+1820endopeptidase Clp, ATP-binding chain - Thermotoga maritima (strain MSB8)>gb:AE001705_38118 Thermotoga maritima MSB8 sec
pir|B70412|B7041270380.086346-4291-28+1810endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity] - Aquifex aeolicus>gb:AE000733_26677 Aquifex aeolicu
gb:AY037264_156015871370.11343-42978-106+1640Arabidopsis thaliana AT5g51070/K3K7_27 mRNA, complete cds.
sp|P42762|ERD1_ARATH72370.11343-42978-106+1945ERD1 protein, chloroplast precursor.>pir|JN0901|JN0901 endopeptidase Clp ATP-binding chain C - Arabidopsis thaliana>gb:A
gb:BX908798_83106773370.15346-4291-28+1847Parachlamydia-related symbiont UWE25, complete genome.
pir|C86545|C8654574370.15346-4291-28+1845ClpC proteinase [imported] - Chlamydophila pneumoniae (strain J138)>gb:BA000008_663808 Chlamydophila pneumoniae J138 ge
gb:BX294144_76878375370.19346-4291-28+1859Pirellula sp. strain 1 complete genome; segment 12/24.
gb:AE017322_44268276360.33346-4232-27+1820Listeria monocytogenes str. 4b F2365, section 1 of 10 of the complete genome.>gb:AE017262_1075038 Listeria monocytogenes
gb:LMU40604_14166177360.33346-4232-27+1825Listeria monocytogenes ClpC ATPase (mec) gene, complete cds.
pir|AI1465|AI146578360.33346-4232-27+1820endopeptidase Clp ATP-binding chain C [imported] - Listeria innocua (strain Clip11262)>gb:AL596164_537611 Listeria innoc
pir|AI1103|AI110379360.33346-4232-27+1820endopeptidase Clp ATP-binding chain C [imported] - Listeria monocytogenes (strain EGD-e)>gb:AL591974_534724 Listeria mon
gb:AP006627_56244880350.73346-4232-27+1818Bacillus clausii KSM-K16 DNA, complete genome.
gb:CP000027_7907181350.73349-4295-31+1824Dehalococcoides ethenogenes 195, complete genome.
gb:BA000045_74161782323.6346-4291-28+1778Gloeobacter violaceus PCC 7421 DNA, complete genome.
pir|C97292|C9729283324.7346-4292-29+1813ATPases with chaperone activity clpC, two ATP-binding domain CAC3189 [imported] - Clostridium acetobutylicum>gb:AE007814
gb:BA000033_71077284326.1358-42980-103+1818Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2.
gb:CP000029_8078985326.1358-42980-103+1817Staphylococcus epidermidis RP62A, complete genome.>gb:AE016744_321937 Staphylococcus epidermidis ATCC 12228, section 1 o
gb:AB083540_1052786326.1358-42974-97+1175Bacillus cereus clpC gene for stress-related ATPase, partial cds.
pir|F89819|F8981987326.1358-42980-103+1818endopeptidase [imported] - Staphylococcus aureus (strain N315)>gb:BA000017_676222 Staphylococcus aureus subsp. aureus Mu
gb:CR380955_165153788318.0117-302326-373+3443Candida glabrata strain CBS138 chromosome I complete sequence.
gb:AP006618_56155089318.0346-4141-23+1189Nocardia farcinica IFM 10152 DNA, complete genome.