Clone JMFS150B09 [sequences]

previous contigF:003392 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AB025604_15162531458e-04406-54079-124+1225Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F2O15.>gb:BT004606_1637640 Arabidopsis thaliana At5g59380 gene
gb:AB084168_24637102430.004412-54911-56+1283Xenopus laevis mRNA for methyl-CpG binding protein MBD3, complete cds.
gb:BC071531_25562673420.005412-54911-56+1273Danio rerio methyl-CpG binding domain protein 3a, mRNA (cDNA clone MGC:86913 IMAGE:6905673), complete cds.
gb:AY888006_25476494420.005412-55512-59+1257Gallus gallus methyl-CpG-binding domain protein 2 (MBD2) mRNA, complete cds.
gb:AY398379_25319095420.005412-54911-56+1273Danio rerio clone RK121A1A12 methyl-CpG binding domain protein 3 (MBD3) mRNA, complete cds.
gb:AF072245_20533586420.005412-555158-205+1249Mus musculus testis specific methyl-CpG binding protein MBD2 (Mbd2) mRNA, complete cds.>gb:MM2MBD1_2113737 Mus musculus
gb:AF072243_20533567420.005412-555158-205+1414Mus musculus methyl-CpG binding protein MBD2 (Mbd2) mRNA, complete cds.>gb:BC046607_2099310 Mus musculus methyl-CpG bind
gb:AB061672_24629068420.007412-56111-60+1267Xenopus laevis mRNA for methyl-CpG binding protein MBD2, complete cds.
gb:HSMETHYL2_20187149410.015412-555155-202+1302Homo sapiens methyl-CpG binding protein 2 (MBD2) gene, exon 2 and alternatively spliced testis-specific methyl-CpG bindi
gb:AF072242_188085310410.015412-555155-202+1411Homo sapiens methyl-CpG binding protein MBD2 (MBD2) mRNA, complete cds.>gb:BC032638_1980587 Homo sapiens methyl-CpG bind
gb:AY238336_252138711400.025412-55511-58+1256Danio rerio methyl-CpG binding protein 2 (mbd2) mRNA, complete cds.
gb:AY050816_156232012400.03346-2409-74+1548Arabidopsis thaliana unknown protein (At1g63240) mRNA, complete cds.>gb:AY114080_1578491 Arabidopsis thaliana unknown pr
gb:OSJN00167_169606613390.043379-54063-115+1377Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0040D17, complete sequence.
gb:OSJN00120_169523214390.056379-52886-134+1418Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033G08, complete sequence.
gb:AY238339_131218815390.056412-54011-53+1326Branchiostoma floridae methyl-CpG binding protein 2/3 (Mbd2/3) mRNA, complete cds.
gb:AF170346_247829116390.073421-54913-55+1282Xenopus laevis methyl-CpG binding protein MBD3 (MBD3) mRNA, complete cds.
gb:AF072248_205335917390.073412-54911-56+1285Mus musculus methyl-CpG binding domain-containing protein MBD3 (Mbd3) mRNA, complete cds.>gb:AF120995_2055352 Mus muscul
gb:AC005943_187506018390.073412-54911-56+1291Homo sapiens chromosome 19, cosmid R30538, complete sequence.>gb:AF072247_1880855 Homo sapiens methyl-CpG binding domain
gb:OSJN00209_169673819380.095406-549123-169+1385Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09, complete sequence.
gb:AB015475_151257020380.12379-555170-227+1306Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMN10.>gb:BT014975_1641945 Arabidopsis thaliana At5g59800 gene,
gb:OSJN00120_169523821370.16388-54089-138+1336Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033G08, complete sequence.>gb:OSJN00167_1696059 Oryza sativa g
gb:AF072246_188085422370.21421-5552-46+1146Homo sapiens testis specific methyl-CpG binding protein MBD2 (MBD2) mRNA, partial cds.
gb:OSJN00253_169743623370.21406-54638-81+1505Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08, complete sequence.
gb:AF051768_247074724360.36412-561101-150+1467Xenopus laevis methyl-CpG-binding protein 2 mRNA, complete cds.>gb:AF106951_2473965 Xenopus laevis methyl-CpG-binding pr
gb:GGARBP_257292725360.47412-561101-150+1344Gallus gallus mRNA for attachment region binding protein (ARBP).
gb:AY298900_252576726360.47412-558109-157+1524Danio rerio methyl-cytosine binding protein 2 (mecp2) mRNA, complete cds.
gb:HSRNACPGB_202003527360.47412-56190-139+1476H.sapiens mRNA for methyl CpG binding protein 2.
gb:HSMECP2X_201869828360.47412-561100-149+1486H.sapiens mRNA for methyl-CpG-binding protein 2.
gb:HSMECP2_201869729360.47412-56191-140+1477H.sapiens MeCP-2 gene.
gb:HSM806231_201824530360.47412-561130-179+1516Homo sapiens mRNA; cDNA DKFZp686A24160 (from clone DKFZp686A24160).
gb:AY541280_195633331360.47412-561112-161+1498Homo sapiens methyl CpG binding protein 2 isoform B (MECP2) mRNA, complete cds.
gb:AF295597_189548432360.47412-561100-149+1486Macaca fascicularis methyl-CpG-binding protein 2 (MECP2) mRNA, complete cds.
gb:AX886192_148164533360.47412-561112-161+1219Sequence 2055 from Patent EP1033401.
pir|S57963|S5796334360.47412-56190-139+1476methyl CpG binding protein 2 - human (fragment)
sp|Q09685|YA12_SCHPO35360.4767-2163-49+1411Hypothetical protein C13C5.02 in chromosome I.>pir|S58094|S58094 hypothetical WW domain protein SPAC13C5.02 - fission ye
sp|Q00566|MEC2_RAT36360.47412-561100-149+1492Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2).>pir|A41907|A41907 methyl-CpG-binding protein 2 - rat>gb:RATMECP2A
sp|Q9Z2D6|MEC2_MOUSE37360.47412-561100-149+1484Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2).>gb:AF072251_2053361 Mus musculus methyl-CpG binding protein 2 (Me
sp|P51608|MEC2_HUMAN38360.47412-561100-149+1486Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2).>gb:AF030876_1877681 Homo sapiens chromosome X clone Qc-8D3, RP4-6
gb:AY080662_156839439350.62409-558244-293+1425Arabidopsis thaliana unknown protein (At1g22310) mRNA, complete cds.>gb:AY133726_1581546 Arabidopsis thaliana clone U198
pir|A86356|A8635640350.62409-558343-392+1524hypothetical protein [imported] - Arabidopsis thaliana>gb:AE005172_891186 Arabidopsis thaliana chromosome 1, top arm com
gb:AF412121_249268341341.464-216182-229+1965Gallus gallus late domain-interacting protein 1 mRNA, partial cds.
gb:BC082281_210834842341.464-216195-242+1875Mus musculus neural precursor cell expressed, developmentally down-regulated gene 4-like, mRNA (cDNA clone IMAGE:5401533
gb:BC039746_209842043341.464-21671-118+1855Mus musculus neural precursor cell expressed, developmentally down-regulated gene 4-like, mRNA (cDNA clone MGC:49433 IMA
gb:AK122283_206894844341.464-216170-217+1442Mus musculus mRNA for mKIAA0439 protein.
gb:AF277232_206126545341.464-21671-118+1855Mus musculus ubiquitin-protein ligase Nedd4-2 mRNA, complete cds.
gb:AF527618_180840846341.4415-54632-74+1400Zea mays methyl binding domain protein MBD109 (mbd109) mRNA, complete cds.
gb:AK042621_116635347341.464-21671-118+1835Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730011F13 product:neural precurs
gb:HSM802187_201742948341.864-216141-188+1820Homo sapiens mRNA; cDNA DKFZp434P2422 (from clone DKFZp434P2422); partial cds.
gb:BC032597_198056349341.864-216192-239+1911Homo sapiens neural precursor cell expressed, developmentally down-regulated 4-like, mRNA (cDNA clone MGC:44873 IMAGE:55
gb:BC000621_196688750341.864-21692-139+1855Homo sapiens neural precursor cell expressed, developmentally down-regulated 4-like, mRNA (cDNA clone IMAGE:3346045), pa
gb:AY751751_196170751341.864-21626-73+1256Homo sapiens NEDD4-2 minus WW2,3 variant (NEDD4L) mRNA, partial cds, alternatively spliced.
gb:AY312514_194325452341.864-216192-239+1975Homo sapiens NEDD4.2 mRNA, complete cds.
gb:AY112985_193647953341.864-216184-231+1947Homo sapiens ubiquitin ligase NEDD4h (NEDD4L) mRNA, complete cds; alternatively spliced.
gb:AY112984_193647854341.864-216184-231+1967Homo sapiens ubiquitin ligase NEDD4g (NEDD4L) mRNA, complete cds; alternatively spliced.
gb:AF210730_189017155341.864-21671-118+1854Homo sapiens NEDD4La (NEDD4La) mRNA, complete cds.>gb:AF385931_1900073 Homo sapiens ubiquitin ligase NEDD4Lb (NEDD4L) mR
gb:AB071179_187120156341.864-216192-239+1955Homo sapiens NEDL3 mRNA for NEDD4-like ubiquitin ligase 3, complete cds.
gb:AB007899_186402557341.864-216232-279+1995Homo sapiens KIAA0439 mRNA, partial cds.
gb:CR858697_118285358341.864-216196-243+1959Pongo pygmaeus mRNA; cDNA DKFZp459F237 (from clone DKFZp459F237).
pir|T46412|T4641259341.864-216141-188+1820ubiquitin-protein ligase (EC 6.3.2.19) NEDD4 - human (fragment)
gb:BC043835_254829160333.1406-5557-58+1321Xenopus laevis methyl-CpG binding domain protein 1, mRNA (cDNA clone MGC:53260 IMAGE:5569883), complete cds.
gb:BC024812_209473361333.1412-54073-115+1554Mus musculus methyl-CpG binding domain protein 4, mRNA (cDNA clone MGC:36060 IMAGE:5356016), complete cds.
gb:AF072249_205336062333.1412-54073-115+1554Mus musculus methyl-CpG binding protein MBD4 (Mbd4) mRNA, complete cds.>gb:AF120996_2055353 Mus musculus domesticus meth
gb:AB097677_1271263333.1194-514222-333+2623Staphylococcus aureus DNA, typeIVd cassette chromosome mec, partial sequence.
gb:XLAJ85_258266864334.070-207191-233+1971Xenopus laevis mRNA for Nedd4 protein.
gb:BC074133_255765165334.070-207191-233+1971Xenopus laevis Nedd4 protein, mRNA (cDNA clone MGC:81849 IMAGE:7008311), complete cds.
gb:BC011752_197318466334.0412-54386-129+1574Homo sapiens methyl-CpG binding domain protein 4, mRNA (cDNA clone MGC:19710 IMAGE:3534047), complete cds.>gb:CR450305_1
gb:AF532602_190617267334.0412-54386-129+1540Homo sapiens methyl-CpG binding domain protein 4 variant mRNA, complete cds; alternatively spliced.
gb:AF072250_188085668334.0412-54386-129+1580Homo sapiens methyl-CpG binding protein MBD4 (MBD4) mRNA, complete cds.>gb:AF114784_1884472 Homo sapiens methyl-CpG bind
gb:AE017341_175389169334.055-16855-90+1847Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence.
gb:CR857219_118146670334.0412-54386-129+1573Pongo pygmaeus mRNA; cDNA DKFZp469B1421 (from clone DKFZp469B1421).
gb:BC075469_255857271325.270-207191-233+1970Xenopus tropicalis neural precursor cell expressed, developmentally down-regulated 4-like, mRNA (cDNA clone MGC:89277 IM
gb:AE016817_174715172325.2379-501305-345+1623Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence.
gb:AB084782_1086973325.288-234149-192+1738Paenibacillus koleovorans dssA gene for sheath polysaccharide-degrading enzyme, complete cds.
gb:AL844847_250459274326.8406-555272-323+1673Zebrafish DNA sequence from clone DKEY-13A21 in linkage group 11 Contains three novel genes, the opn1lw1 gene for opsin
gb:AB084169_246371175326.8412-54911-75+1302Xenopus laevis mRNA for methyl-CpG binding protein MBD3 long form, complete cds.>gb:BC077740_2560396 Xenopus laevis meth
gb:AP004376_184095376326.8406-546200-246+1885Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0481F05.
gb:AE014297_113918177326.8406-546364-409+11081Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003695_1221174 Drosophila melanogaster chromosome 3R, sec
gb:AE014297_113918078326.8406-546452-497+11169Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003695_1221173 Drosophila melanogaster chromosome 3R, sec
pir|S59074|S5907479326.8130-22816-48-151protochlorophyllide reductase (EC 1.3.1.33) - Phormidium foveolarum (fragment)
pir|AI2023|AI202380326.897-228193-234-1329protochlorophyllide oxido-reductase [imported] - Nostoc sp. (strain PCC 7120)>gb:BA000019_682732 Nostoc sp. PCC 7120 DN
gb:AF170347_247829281328.9412-54911-76+1303Xenopus laevis methyl-CpG binding protein MBD3 long form (MBD3) mRNA, complete cds.