Clone JMFS124F04 [sequences]

previous contigF:003709 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
sp|P31542|CLAB_LYCES11532e-36104-5651-150+2923ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplast precursor.>pir|B35905|B35905 endopeptidase
sp|P31541|CLAA_LYCES21425e-33101-5651-152+2926ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplast precursor.>pir|A35905|A35905 endopeptidase
gb:AF043539_176374531332e-30104-5651-149+2891Spinacia oleracea ClpC protease (clpC) mRNA, chloroplast gene encoding chloroplast protein, complete cds.
sp|P35100|CLPA_PEA41254e-28104-5651-150+2922ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor.>pir|S31164|S31164 endopeptidase Clp
gb:AB017063_151333451217e-27110-5656-153+2929Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7.>gb:AY102125_1577730 Arabidopsis thaliana AT5g50920/K3K7_
pir|T52292|T5229261186e-26110-5656-152+2928endopeptidase Clp (EC 3.4.21.92) ATP-binding chain C, chloroplast [imported] - Arabidopsis thaliana>gb:AF022909_1762028
gb:AY056787_156383671032e-21212-56556-173+2558Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, complete cds.
pir|T49283|T4928381032e-21212-56556-173+2952AtClpC - Arabidopsis thaliana>gb:AX765872_1474625 Sequence 81 from Patent WO03008440.>gb:ATT21J18_1555142 Arabidopsis th
pir|T52456|T5245691032e-21212-56556-173+2952endopeptidase Clp ATP-binding chain C [imported] - Arabidopsis thaliana>gb:AB022324_1515222 Arabidopsis thaliana mRNA fo
pir|S37557|S3755710963e-19275-5654-100+2874endopeptidase Clp ATP-binding chain A, chloroplast - rape (fragment)
sp|P46523|CLPA_BRANA11963e-19275-5654-100+2874ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor (Fragment).>gb:BNCLPA_1633519 B.napus
gb:OSJN00240_169723712912e-17218-5651-116+2888Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence.
gb:AP008231_58094813833e-15380-56514-75+2839Synechococcus elongatus PCC 6301 DNA, complete genome.
pir|S71553|S7155314833e-15380-56514-75+2839endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity] - Synechococcus sp. (strain PCC 7942)>gb:SSU16134_19
pir|AH2180|AH218015833e-15383-56516-76+2839endopeptidase Clp ATP-binding chain [imported] - Nostoc sp. (strain PCC 7120)>gb:BA000019_683988 Nostoc sp. PCC 7120 DN
gb:BX569691_77584016811e-14386-5651-60+2846Synechococcus sp. WH8102 complete genome; segment 3/7.
gb:BA000045_74213917811e-14386-5651-60+2819Gloeobacter violaceus PCC 7421 DNA, complete genome.
pir|S76330|S7633018811e-14386-5651-60+2821endopeptidase Clp (EC 3.4.21.-) ATP-binding chain C [similarity] - Synechocystis sp. (strain PCC 6803)>gb:BA000022_68957
sp|O78410|CLPC_GUITH19811e-14386-5651-60+2819ATP-dependent Clp protease ATP-binding subunit clpA homolog.>gb:AF041468_1763464 Guillardia theta complete plastid genom
gb:BA000039_72609220802e-14386-5651-60+2824Thermosynechococcus elongatus BP-1 DNA, complete genome.
gb:AE017164_39556321802e-14386-5651-60+2856Prochlorococcus marinus subsp. marinus str. CCMP1375 section 4 of 6 of the complete genome.>gb:AE017126_1031232 Prochlor
gb:BX572098_79840322795e-14386-5651-60+2859Prochlorococcus marinus MIT9313 complete genome; segment 4/7.
gb:BX572092_79671423795e-14386-5651-60+2842Prochlorococcus marinus MED4 complete genome; segment 3/5.
sp|Q9TM05|CLPC_CYACA24797e-14380-56530-91+2854ATP-dependent Clp protease ATP-binding subunit clpA homolog.>gb:AF022186_1761876 Cyanidium caldarium strain RK1 chloropl
gb:AY673996_162140825771e-13386-5651-60+2823Gracilaria tenuistipitata var. liui chloroplast, complete genome.
sp|P51332|CLPC_PORPU26771e-13386-5651-60+2821ATP-dependent Clp protease ATP-binding subunit clpA homolog.>pir|S73253|S73253 endopeptidase Clp (EC 3.4.21.-) ATP-bindi
pir|T47485|T4748527756e-13386-5651-60+2341clpC-like protein - Arabidopsis thaliana>gb:ATF9K21_1551403 Arabidopsis thaliana DNA chromosome 3, BAC clone F9K21.
gb:AB002583_150880728734e-12386-5651-60+2821Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D.
gb:BA000045_74214329702e-11386-5651-60+2330Gloeobacter violaceus PCC 7421 DNA, complete genome.
pir|AE2051|AE205130703e-11386-5651-60+2814endopeptidase Clp ATP-binding chain [imported] - Nostoc sp. (strain PCC 7120)>gb:BA000019_682952 Nostoc sp. PCC 7120 DN
sp|P49574|CLPC_ODOSI31594e-08386-5651-60+2885ATP-dependent Clp protease ATP-binding subunit clpA homolog.>pir|S78246|S78246 endopeptidase Clp (EC 3.4.21.-) ATP-bindi
gb:BX248359_76324832565e-07386-5656-65+2883Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 6/8.
gb:AX065707_145976733556e-07386-5651-60+2327Sequence 51 from Patent WO0100842.
gb:BA000036_72040534556e-07386-5651-60+2925Corynebacterium glutamicum ATCC 13032 DNA, complete genome.>gb:BX927156_834211 Corynebacterium glutamicum ATCC 13032, IS
gb:BA000035_71731035556e-07386-5651-60+2927Corynebacterium efficiens YS-314 DNA, complete genome.
gb:AE000516_2383136556e-07386-5651-60+2848Mycobacterium tuberculosis CDC1551, complete genome.
gb:BA000030_70258437551e-06386-5651-60+2841Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
gb:BA000030_70048638551e-06386-5651-60+2842Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
pir|T36384|T3638439551e-06386-5651-60+2841probable ATP-binding proteinase - Streptomyces coelicolor>gb:SCO939116_177046 Streptomyces coelicolor A3(2) complete gen
gb:AP006618_55680640541e-06386-5651-60+2851Nocardia farcinica IFM 10152 DNA, complete genome.
gb:AE017228_41116641541e-06386-5651-60+2843Mycobacterium avium subsp. paratuberculosis str. k10, section 2 of 16 of the complete genome.>gb:AE016958_1054570 Mycoba
sp|O06286|CLPC_MYCTU42541e-06386-5651-60+2848Probable ATP-dependent Clp protease ATP-binding subunit.>pir|E70954|E70954 endopeptidase Clp (EC 3.4.21.-) ATP-binding c
gb:AE016850_34858943542e-06386-5655-64+2840Tropheryma whipplei str. Twist, section 1 of 3 of the complete genome.>gb:BX251410_764289 Tropheryma whipplei TW08/27, c
gb:MLPUTATP_14877644533e-06386-5651-60+2649Mycobacterium leprae DNA for putative atp operon.
pir|S11163|S1116345533e-06386-5651-60+2649endopeptidase Clp ATP-binding chain C - Mycobacterium leprae (fragment)
sp|P24428|CLPC_MYCLE46533e-06386-5651-60+2848Probable ATP-dependent Clp protease ATP-binding subunit.>pir|C86938|C86938 probable ATP-dependent Clp proteinase [import
gb:AE016822_34105647534e-06386-5651-60+2839Leifsonia xyli subsp. xyli str. CTCB07, complete genome.
gb:MSGA15AGA_15037848534e-06386-5651-60+297M.leprae antigen 15 kDa gene, complete cds.
gb:AP006840_57031949511e-05386-5651-60+2833Symbiobacterium thermophilum DNA, complete genome.
gb:AE014295_31074950511e-05386-5651-60+2869Bifidobacterium longum NCC2705, complete genome.
gb:AE017283_43006851502e-05386-5651-60+2844Propionibacterium acnes KPA171202, complete genome.
gb:AE013175_28989352497e-05383-5652-62+2816Thermoanaerobacter tengcongensis MB4, section 202 of 244 of the complete genome.>gb:AE008691_1111958 Thermoanaerobacter
gb:AE017333_44604053481e-04386-5502-56+2810Bacillus licheniformis DSM 13, complete genome.>gb:CP000002_855863 Bacillus licheniformis ATCC 14580, complete genome.>g
gb:BA000028_69448054472e-04386-5532-57+2809Oceanobacillus iheyensis HTE831 DNA, complete genome.
sp|P37571|CLPC_BACSU55472e-04386-5472-55+2810Negative regulator of genetic competence clpC/mecB.>pir|I40508|I40508 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain
pir|G83662|G8366256472e-04386-5472-55+2813class III stress response-related ATPase clpC [imported] - Bacillus halodurans (strain C-125)>gb:BA000004_654049 Bacillu
gb:BA000043_73665557464e-04386-5472-55+2810Geobacillus kaustophilus HTA426 DNA, complete genome.
pir|G72079|G7207958465e-04386-5651-60+2845endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity] - Chlamydophila pneumoniae (strain CWL029)>gb:AE0016
sp|Q9Z8A6|CLPC_CHLPN59465e-04386-5651-60+2845Probable ATP-dependent Clp protease ATP-binding subunit.>pir|G81590|G81590 ATP-dependent Clp proteinase, ATP-binding cha
gb:BX294144_76878360450.001386-5651-60+2859Pirellula sp. strain 1 complete genome; segment 12/24.
pir|C86545|C8654561450.001386-5651-60+2845ClpC proteinase [imported] - Chlamydophila pneumoniae (strain J138)>gb:BA000008_663808 Chlamydophila pneumoniae J138 ge
gb:AE016995_37441862440.001386-5651-60+2846Chlamydophila caviae GPIC section 2 of 4 of the complete genome.>gb:AE015925_994097 Chlamydophila caviae GPIC complete g
sp|O84288|CLPC_CHLTR63440.001386-5651-60+2854Probable ATP-dependent Clp protease ATP-binding subunit.>pir|C71533|C71533 endopeptidase Clp (EC 3.4.21.-) ATP-binding c
sp|Q9PKA8|CLPC_CHLMU64440.001386-56517-76+2870Probable ATP-dependent Clp protease ATP-binding subunit.>pir|B81689|B81689 ATP-dependent Clp proteinase, ATP-binding cha
gb:CP000001_85071365440.002386-5502-56+2811Bacillus cereus ZK, complete genome.
gb:AE017024_38037766440.002386-5502-56+2811Bacillus anthracis str. Ames section 1 of 18 of the complete genome.>gb:AE017225_405494 Bacillus anthracis str. Sterne,
gb:AE016998_37514067440.002386-5502-56+2811Bacillus cereus ATCC 14579 section 1 of 18 of the complete genome.>gb:AE016877_1015390 Bacillus cereus ATCC 14579 comple
gb:CP000027_7907168430.003389-5655-63+2824Dehalococcoides ethenogenes 195, complete genome.
gb:AE017322_44268269430.004395-56579-135+2820Listeria monocytogenes str. 4b F2365, section 1 of 10 of the complete genome.>gb:AE017262_1075038 Listeria monocytogenes
gb:LMU40604_14166170430.004395-56579-135+2825Listeria monocytogenes ClpC ATPase (mec) gene, complete cds.
pir|AI1465|AI146571430.004395-56579-135+2820endopeptidase Clp ATP-binding chain C [imported] - Listeria innocua (strain Clip11262)>gb:AL596164_537611 Listeria innoc
pir|AI1103|AI110372430.004395-56579-135+2820endopeptidase Clp ATP-binding chain C [imported] - Listeria monocytogenes (strain EGD-e)>gb:AL591974_534724 Listeria mon
gb:BA000045_74161773420.005386-5651-60+2778Gloeobacter violaceus PCC 7421 DNA, complete genome.
gb:AP006627_56244874420.005398-56584-139+2818Bacillus clausii KSM-K16 DNA, complete genome.
gb:AB083540_1052775420.005398-56574-129+2175Bacillus cereus clpC gene for stress-related ATPase, partial cds.
pir|H72404|H7240476420.007386-5651-60+2820endopeptidase Clp, ATP-binding chain - Thermotoga maritima (strain MSB8)>gb:AE001705_38118 Thermotoga maritima MSB8 sec
gb:BX908798_83106777420.009386-5651-60+2847Parachlamydia-related symbiont UWE25, complete genome.
gb:OSJN00288_169800978400.026215-4693-97+2877Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02, complete sequence.
gb:AP004777_184491579390.057380-56571-130+2938Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05.
gb:AY166599_158618180390.057380-56571-130+2938Oryza sativa (indica cultivar-group) ATP-dependent Clp protease ATP-binding subunit precursor (CLPD1) mRNA, complete cds
gb:BA000033_71077281380.098398-56580-135+2818Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2.
gb:CP000029_8078982380.098398-56580-135+2817Staphylococcus epidermidis RP62A, complete genome.>gb:AE016744_321937 Staphylococcus epidermidis ATCC 12228, section 1 o
pir|F89819|F8981983380.098398-56580-135+2818endopeptidase [imported] - Staphylococcus aureus (strain N315)>gb:BA000017_676222 Staphylococcus aureus subsp. aureus Mu
pir|B70412|B7041284380.13386-4691-28+2810endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity] - Aquifex aeolicus>gb:AE000733_26677 Aquifex aeolicu
gb:AY037264_156015885370.17383-46978-106+2640Arabidopsis thaliana AT5g51070/K3K7_27 mRNA, complete cds.
pir|C97292|C9729286370.17386-5652-61+2813ATPases with chaperone activity clpC, two ATP-binding domain CAC3189 [imported] - Clostridium acetobutylicum>gb:AE007814
sp|P42762|ERD1_ARATH87370.17383-46978-106+2945ERD1 protein, chloroplast precursor.>pir|JN0901|JN0901 endopeptidase Clp ATP-binding chain C - Arabidopsis thaliana>gb:A
gb:BA000045_74266388360.37398-5659-64+2348Gloeobacter violaceus PCC 7421 DNA, complete genome.
gb:AF497482_51655089351.1398-56542-97+2797Micromonospora echinospora calicheamicin biosynthetic locus, complete sequence.
gb:AE017288_43257590351.1398-5654-60+2846Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, section 2 of 14 of the complete sequence.>
gb:AE011226_27062991351.1398-5654-60+2846Leptospira interrogans serovar lai str. 56601 chromosome I, section 35 of 397 of the complete sequence.>gb:AE010300_1004
gb:AY224707_59917492341.4428-5652-47+2166Bacillus cereus strain 391-98 ClpC (clpC) gene, partial cds.
gb:AY224705_59917293341.4428-5652-47+2166Bacillus weihenstephanensis strain WSBC 10311 ClpC (clpC) gene, partial cds.>gb:AY224706_599173 Bacillus weihenstephanen
gb:AY224703_59917094341.4428-5652-47+2166Bacillus weihenstephanensis strain WSBC 10206 ClpC (clpC) gene, partial cds.
gb:AY224698_59916595341.4428-5652-47+2166Bacillus cereus strain BGSC 6A5 ClpC (clpC) gene, partial cds.>gb:AY224699_599166 Bacillus thuringiensis serovar canaden
gb:AY224696_59916396341.4428-5652-47+2166Bacillus thuringiensis serovar israelensis strain ATCC 35646 ClpC (clpC) gene, partial cds.>gb:AY224697_599164 Bacillus
gb:AE012798_28568197332.4398-5535-56+2854Chlorobium tepidum TLS section 19 of 194 of the complete genome.>gb:AE006470_932849 Chlorobium tepidum TLS complete geno
gb:AE016957_36721098327.0386-5651-60+2831Enterococcus faecalis V583, section 11 of 11 of the complete genome.>gb:AE016830_993698 Enterococcus faecalis V583, comp