Clone JMFS102G06 [sequences]

previous contigF:003709 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
sp|P31542|CLAB_LYCES11261e-5731-3961-118+1923ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplast precursor.>pir|B35905|B35905 endopeptidase
gb:AF043539_176374531191e-51390-614116-190+3891Spinacia oleracea ClpC protease (clpC) mRNA, chloroplast gene encoding chloroplast protein, complete cds.
gb:AB017063_151333451195e-48390-614120-194+3929Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7.>gb:AY102125_1577730 Arabidopsis thaliana AT5g50920/K3K7_
pir|S37557|S37557101192e-40390-61467-141+3874endopeptidase Clp ATP-binding chain A, chloroplast - rape (fragment)
sp|P46523|CLPA_BRANA111192e-40390-61467-141+3874ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor (Fragment).>gb:BNCLPA_1633519 B.napus
gb:OSJN00240_1697237121191e-38390-61483-157+3888Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence.
sp|P31541|CLAA_LYCES21185e-54390-614119-193+3926ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplast precursor.>pir|A35905|A35905 endopeptidase
pir|S71553|S71553131182e-36390-61442-116+3839endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity] - Synechococcus sp. (strain PCC 7942)>gb:SSU16134_19
pir|AH2180|AH2180141183e-36390-61443-117+3839endopeptidase Clp ATP-binding chain [imported] - Nostoc sp. (strain PCC 7120)>gb:BA000019_683988 Nostoc sp. PCC 7120 DN
gb:BX569691_775840151186e-36390-61427-101+3846Synechococcus sp. WH8102 complete genome; segment 3/7.
sp|O78410|CLPC_GUITH171186e-36390-61427-101+3819ATP-dependent Clp protease ATP-binding subunit clpA homolog.>gb:AF041468_1763464 Guillardia theta complete plastid genom
pir|S76330|S76330181188e-36390-61427-101+3821endopeptidase Clp (EC 3.4.21.-) ATP-binding chain C [similarity] - Synechocystis sp. (strain PCC 6803)>gb:BA000022_68957
gb:BA000045_742139191188e-36390-61427-101+3819Gloeobacter violaceus PCC 7421 DNA, complete genome.
pir|T49283|T4928371171e-42390-614140-214+3952AtClpC - Arabidopsis thaliana>gb:AX765872_1474625 Sequence 81 from Patent WO03008440.>gb:ATT21J18_1555142 Arabidopsis th
pir|T52456|T5245681171e-42390-614140-214+3952endopeptidase Clp ATP-binding chain C [imported] - Arabidopsis thaliana>gb:AB022324_1515222 Arabidopsis thaliana mRNA fo
gb:AY056787_156383691171e-42390-614140-214+3558Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, complete cds.
gb:AE017164_395563201171e-35390-61427-101+3856Prochlorococcus marinus subsp. marinus str. CCMP1375 section 4 of 6 of the complete genome.>gb:AE017126_1031232 Prochlor
gb:BA000039_726092211172e-35390-61427-101+3824Thermosynechococcus elongatus BP-1 DNA, complete genome.
sp|P35100|CLPA_PEA41161e-48390-614117-191+3922ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor.>pir|S31164|S31164 endopeptidase Clp
gb:AP008231_580948161166e-36390-61442-116+3839Synechococcus elongatus PCC 6301 DNA, complete genome.
gb:BX572098_798403221163e-35390-61427-101+3859Prochlorococcus marinus MIT9313 complete genome; segment 4/7.
pir|T52292|T5229261156e-46390-614119-193+3928endopeptidase Clp (EC 3.4.21.92) ATP-binding chain C, chloroplast [imported] - Arabidopsis thaliana>gb:AF022909_1762028
gb:BX572092_796714231154e-35390-61427-101+3842Prochlorococcus marinus MED4 complete genome; segment 3/5.
sp|P51332|CLPC_PORPU241148e-35390-61427-101+3821ATP-dependent Clp protease ATP-binding subunit clpA homolog.>pir|S73253|S73253 endopeptidase Clp (EC 3.4.21.-) ATP-bindi
gb:AY673996_1621408251141e-34390-61427-101+3823Gracilaria tenuistipitata var. liui chloroplast, complete genome.
sp|Q9TM05|CLPC_CYACA261031e-31390-61458-132+3854ATP-dependent Clp protease ATP-binding subunit clpA homolog.>gb:AF022186_1761876 Cyanidium caldarium strain RK1 chloropl
gb:AB002583_1508807271032e-31390-61427-101+3821Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D.
gb:BA000045_742143281035e-31390-61427-101+3330Gloeobacter violaceus PCC 7421 DNA, complete genome.
pir|AE2051|AE205130862e-24390-61427-101+3814endopeptidase Clp ATP-binding chain [imported] - Nostoc sp. (strain PCC 7120)>gb:BA000019_682952 Nostoc sp. PCC 7120 DN
pir|T47485|T4748529801e-24390-56027-83+3341clpC-like protein - Arabidopsis thaliana>gb:ATF9K21_1551403 Arabidopsis thaliana DNA chromosome 3, BAC clone F9K21.
sp|P49574|CLPC_ODOSI31793e-22390-61427-101+3885ATP-dependent Clp protease ATP-binding subunit clpA homolog.>pir|S78246|S78246 endopeptidase Clp (EC 3.4.21.-) ATP-bindi
gb:BA000030_70048633754e-19390-61427-101+3842Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
gb:BA000030_70258434754e-19390-61427-101+3841Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
pir|T36384|T3638435754e-19390-61427-101+3841probable ATP-binding proteinase - Streptomyces coelicolor>gb:SCO939116_177046 Streptomyces coelicolor A3(2) complete gen
gb:AE000516_2383132742e-19390-61427-101+3848Mycobacterium tuberculosis CDC1551, complete genome.
gb:AP006618_55680636745e-19390-61427-101+3851Nocardia farcinica IFM 10152 DNA, complete genome.
sp|O06286|CLPC_MYCTU37745e-19390-61427-101+3848Probable ATP-dependent Clp protease ATP-binding subunit.>pir|E70954|E70954 endopeptidase Clp (EC 3.4.21.-) ATP-binding c
gb:AE017228_41116638745e-19390-61427-101+3843Mycobacterium avium subsp. paratuberculosis str. k10, section 2 of 16 of the complete genome.>gb:AE016958_1054570 Mycoba
gb:BX248359_76324839747e-19390-61132-105+3883Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 6/8.
gb:BA000036_72040540731e-18390-61127-100+3925Corynebacterium glutamicum ATCC 13032 DNA, complete genome.>gb:BX927156_834211 Corynebacterium glutamicum ATCC 13032, IS
gb:AX065707_145976741731e-18390-61127-100+3327Sequence 51 from Patent WO0100842.
gb:AP006840_57031948735e-17390-61427-102+3833Symbiobacterium thermophilum DNA, complete genome.
gb:BA000035_71731042722e-18390-61127-100+3927Corynebacterium efficiens YS-314 DNA, complete genome.
sp|P24428|CLPC_MYCLE43722e-18390-61427-101+3848Probable ATP-dependent Clp protease ATP-binding subunit.>pir|C86938|C86938 probable ATP-dependent Clp proteinase [import
gb:MLPUTATP_14877644722e-18390-61427-101+3649Mycobacterium leprae DNA for putative atp operon.
pir|S11163|S1116345722e-18390-61427-101+3649endopeptidase Clp ATP-binding chain C - Mycobacterium leprae (fragment)
gb:AE016822_34105647719e-18390-61427-101+3839Leifsonia xyli subsp. xyli str. CTCB07, complete genome.
gb:AF497482_51655066711e-11444-6147-63+3797Micromonospora echinospora calicheamicin biosynthetic locus, complete sequence.
gb:AE016850_34858946703e-18390-61431-105+3840Tropheryma whipplei str. Twist, section 1 of 3 of the complete genome.>gb:BX251410_764289 Tropheryma whipplei TW08/27, c
gb:AE017283_43006849691e-16390-61427-101+3844Propionibacterium acnes KPA171202, complete genome.
gb:AE014295_31074950655e-16390-61427-101+3869Bifidobacterium longum NCC2705, complete genome.
gb:BA000045_74266367656e-11387-61430-105+3348Gloeobacter violaceus PCC 7421 DNA, complete genome.
gb:MSGA15AGA_15037851632e-15390-60227-97+397M.leprae antigen 15 kDa gene, complete cds.
gb:BX294144_76878358632e-13387-61426-102+3859Pirellula sp. strain 1 complete genome; segment 12/24.
gb:BA000043_73665552609e-15393-61429-101+3810Geobacillus kaustophilus HTA426 DNA, complete genome.
sp|P37571|CLPC_BACSU53609e-15393-61429-101+3810Negative regulator of genetic competence clpC/mecB.>pir|I40508|I40508 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain
gb:CP000001_85071355605e-14393-61429-101+3811Bacillus cereus ZK, complete genome.
gb:CP000027_7907165605e-12390-61430-104+3824Dehalococcoides ethenogenes 195, complete genome.
pir|G83662|G8366254584e-14393-61429-101+3813class III stress response-related ATPase clpC [imported] - Bacillus halodurans (strain C-125)>gb:BA000004_654049 Bacillu
gb:BA000028_69448057581e-13393-61429-101+3809Oceanobacillus iheyensis HTE831 DNA, complete genome.
gb:AE017024_38037759582e-13393-61429-101+3811Bacillus anthracis str. Ames section 1 of 18 of the complete genome.>gb:AE017225_405494 Bacillus anthracis str. Sterne,
gb:AE016998_37514060582e-13393-61429-101+3811Bacillus cereus ATCC 14579 section 1 of 18 of the complete genome.>gb:AE016877_1015390 Bacillus cereus ATCC 14579 comple
gb:LMU40604_14166161582e-12393-61129-100+3825Listeria monocytogenes ClpC ATPase (mec) gene, complete cds.
gb:AE017322_44268262582e-12393-61129-100+3820Listeria monocytogenes str. 4b F2365, section 1 of 10 of the complete genome.>gb:AE017262_1075038 Listeria monocytogenes
pir|AI1465|AI146563582e-12393-61129-100+3820endopeptidase Clp ATP-binding chain C [imported] - Listeria innocua (strain Clip11262)>gb:AL596164_537611 Listeria innoc
pir|AI1103|AI110364582e-12393-61129-100+3820endopeptidase Clp ATP-binding chain C [imported] - Listeria monocytogenes (strain EGD-e)>gb:AL591974_534724 Listeria mon
gb:BA000033_71077269581e-10393-61429-101+3818Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2.
pir|F89819|F8981970581e-10393-61429-101+3818endopeptidase [imported] - Staphylococcus aureus (strain N315)>gb:BA000017_676222 Staphylococcus aureus subsp. aureus Mu
gb:AB083540_1052781581e-07393-61423-95+3175Bacillus cereus clpC gene for stress-related ATPase, partial cds.
gb:AE017333_44604056575e-14393-61429-101+3810Bacillus licheniformis DSM 13, complete genome.>gb:CP000002_855863 Bacillus licheniformis ATCC 14580, complete genome.>g
gb:BA000045_74161771562e-10393-60828-99+3778Gloeobacter violaceus PCC 7421 DNA, complete genome.
gb:AE013175_28989383551e-06336-60211-98+3816Thermoanaerobacter tengcongensis MB4, section 202 of 244 of the complete genome.>gb:AE008691_1111958 Thermoanaerobacter
gb:AP006627_56244868548e-11393-61429-105+3818Bacillus clausii KSM-K16 DNA, complete genome.
gb:CP000029_8078972541e-09393-61429-101+3817Staphylococcus epidermidis RP62A, complete genome.>gb:AE016744_321937 Staphylococcus epidermidis ATCC 12228, section 1 o
pir|C97292|C9729277512e-08390-61428-103+3813ATPases with chaperone activity clpC, two ATP-binding domain CAC3189 [imported] - Clostridium acetobutylicum>gb:AE007814
gb:AE015945_32164488511e-05453-61448-102+3811Clostridium tetani E88, section 10 of 10 of the complete genome.>gb:AE015927_964433 Clostridium tetani E88, complete gen
pir|D75436|D7543689497e-05444-60844-99+3747ATP-dependent Clp proteinase, ATP-binding subunit ClpC - Deinococcus radiodurans (strain R1)>gb:AE001961_41388 Deinococc
gb:AE017301_43581490499e-05444-60843-98+3736Thermus thermophilus HB27 section 1 of 7 of the complete genome.>gb:AP008226_577999 Thermus thermophilus HB8 genomic DNA
pir|H72404|H7240473461e-08390-60827-99+3820endopeptidase Clp, ATP-binding chain - Thermotoga maritima (strain MSB8)>gb:AE001705_38118 Thermotoga maritima MSB8 sec
gb:BX908798_83106776442e-08390-61427-102+3847Parachlamydia-related symbiont UWE25, complete genome.
gb:AE017288_43257592440.002390-61427-102+3846Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, section 2 of 14 of the complete sequence.>
gb:AE011226_27062993440.002390-61427-102+3846Leptospira interrogans serovar lai str. 56601 chromosome I, section 35 of 397 of the complete sequence.>gb:AE010300_1004
gb:AL935254_55090894440.003387-61426-104+3837Lactobacillus plantarum strain WCFS1 complete genome; segment 3/11.
gb:AF401667_50758687438e-06393-60228-101+3709Lactobacillus sakei rrnC operon, partial sequence.
pir|G72079|G7207974422e-08390-61427-102+3845endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity] - Chlamydophila pneumoniae (strain CWL029)>gb:AE0016
sp|Q9Z8A6|CLPC_CHLPN75422e-08390-61427-102+3845Probable ATP-dependent Clp protease ATP-binding subunit.>pir|G81590|G81590 ATP-dependent Clp proteinase, ATP-binding cha
pir|C86545|C8654578425e-08390-61427-102+3845ClpC proteinase [imported] - Chlamydophila pneumoniae (strain J138)>gb:BA000008_663808 Chlamydophila pneumoniae J138 ge
gb:OSJN00288_169800997410.018142-3993-98+1877Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02, complete sequence.
sp|O84288|CLPC_CHLTR79409e-08390-61427-102+3854Probable ATP-dependent Clp protease ATP-binding subunit.>pir|C71533|C71533 endopeptidase Clp (EC 3.4.21.-) ATP-binding c
gb:AE016995_37441880409e-08390-61427-102+3846Chlamydophila caviae GPIC section 2 of 4 of the complete genome.>gb:AE015925_994097 Chlamydophila caviae GPIC complete g
sp|Q9PKA8|CLPC_CHLMU82401e-07390-61443-118+3870Probable ATP-dependent Clp protease ATP-binding subunit.>pir|B81689|B81689 ATP-dependent Clp proteinase, ATP-binding cha
gb:AE016957_36721091402e-04387-60826-104+3831Enterococcus faecalis V583, section 11 of 11 of the complete genome.>gb:AE016830_993698 Enterococcus faecalis V583, comp
gb:AP004777_184491585396e-06307-39971-101+1938Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05.
gb:AY166599_158618186396e-06307-39971-101+1938Oryza sativa (indica cultivar-group) ATP-dependent Clp protease ATP-binding subunit precursor (CLPD1) mRNA, complete cds
gb:BA000045_74022798390.068393-60828-102+3148Gloeobacter violaceus PCC 7421 DNA, complete genome.
pir|T36359|T3635996380.014444-614138-194+3258hypothetical protein SCE9.40 - Streptomyces coelicolor>gb:SCO939116_177106 Streptomyces coelicolor A3(2) complete genome
gb:AE017201_40370699380.15387-60826-99+3822Lactobacillus johnsonii NCC 533, section 2 of 7 of the complete genome.>gb:AE017198_1122193 Lactobacillus johnsonii NCC
pir|B70412|B7041284373e-06313-3961-28+1810endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity] - Aquifex aeolicus>gb:AE000733_26677 Aquifex aeolicu
gb:BA000016_675481100370.20477-61449-102+3814Clostridium perfringens str. 13 DNA, complete genome.
gb:CP000033_88591101370.20387-61126-100+3825Lactobacillus acidophilus NCFM, complete genome.
gb:AY037264_1560158102370.26310-39678-106+1640Arabidopsis thaliana AT5g51070/K3K7_27 mRNA, complete cds.
sp|P42762|ERD1_ARATH103370.26310-39678-106+1945ERD1 protein, chloroplast precursor.>pir|JN0901|JN0901 endopeptidase Clp ATP-binding chain C - Arabidopsis thaliana>gb:A
sp|Q54316|HLYB_TREHY95350.003444-61447-104+3828Hemolysin B.>gb:SHTLYBA_183460 S.hyodysenteriae gene for tlyB hemolysin.
gb:BA000030_702524104350.75444-614104-160+3229Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
gb:AE017237_413492106332.9516-614164-196+3250Mycobacterium avium subsp. paratuberculosis str. k10, section 11 of 16 of the complete genome.>gb:AE016958_1056896 Mycob
pir|H72258|H72258107332.9450-60849-106+3791endopeptidase Clp, ATP-binding chain - Thermotoga maritima (strain MSB8)>gb:AE001792_39290 Thermotoga maritima MSB8 sec
gb:AP006618_561678108333.7543-614172-195+3243Nocardia farcinica IFM 10152 DNA, complete genome.
pir|A83589|A83589109326.4453-61448-103+3850probable ClpA/B proteinase ATP binding subunit PA0459 [imported] - Pseudomonas aeruginosa (strain PAO1)>gb:AE004483_5469
sp|P71964|YQ67_MYCTU110326.4543-614170-193+3252Hypothetical protein Rv2667/MT2741/Mb2686.>pir|G70967|G70967 probable clpX' protein - Mycobacterium tuberculosis (strain
gb:AE012798_285681105280.76390-59927-97+3854Chlorobium tepidum TLS section 19 of 194 of the complete genome.>gb:AE006470_932849 Chlorobium tepidum TLS complete geno