Clone JMFS097F10 [sequences]

previous contigF:003709 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
sp|P31542|CLAB_LYCES12324e-6032-6191-192+2923ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplast precursor.>pir|B35905|B35905 endopeptidase
sp|P31541|CLAA_LYCES22202e-5629-6191-194+2926ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplast precursor.>pir|A35905|A35905 endopeptidase
gb:AF043539_176374532125e-5432-6191-191+2891Spinacia oleracea ClpC protease (clpC) mRNA, chloroplast gene encoding chloroplast protein, complete cds.
sp|P35100|CLPA_PEA42049e-5232-6191-192+2922ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor.>pir|S31164|S31164 endopeptidase Clp
gb:AB017063_151333452002e-5038-6196-195+2929Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7.>gb:AY102125_1577730 Arabidopsis thaliana AT5g50920/K3K7_
pir|T52292|T5229261932e-4838-6196-194+2928endopeptidase Clp (EC 3.4.21.92) ATP-binding chain C, chloroplast [imported] - Arabidopsis thaliana>gb:AF022909_1762028
gb:AY056787_156383671825e-45140-61956-215+2558Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, complete cds.
pir|T49283|T4928381825e-45140-61956-215+2952AtClpC - Arabidopsis thaliana>gb:AX765872_1474625 Sequence 81 from Patent WO03008440.>gb:ATT21J18_1555142 Arabidopsis th
pir|T52456|T5245691825e-45140-61956-215+2952endopeptidase Clp ATP-binding chain C [imported] - Arabidopsis thaliana>gb:AB022324_1515222 Arabidopsis thaliana mRNA fo
pir|S37557|S37557101748e-43203-6194-142+2874endopeptidase Clp ATP-binding chain A, chloroplast - rape (fragment)
sp|P46523|CLPA_BRANA111748e-43203-6194-142+2874ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor (Fragment).>gb:BNCLPA_1633519 B.napus
gb:OSJN00240_1697237121694e-41146-6191-158+2888Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence.
pir|S71553|S71553131619e-39308-61914-117+2839endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity] - Synechococcus sp. (strain PCC 7942)>gb:SSU16134_19
pir|AH2180|AH2180141601e-38311-61916-118+2839endopeptidase Clp ATP-binding chain [imported] - Nostoc sp. (strain PCC 7120)>gb:BA000019_683988 Nostoc sp. PCC 7120 DN
gb:BX569691_775840151593e-38314-6191-102+2846Synechococcus sp. WH8102 complete genome; segment 3/7.
gb:AP008231_580948161593e-38308-61914-117+2839Synechococcus elongatus PCC 6301 DNA, complete genome.
sp|O78410|CLPC_GUITH171593e-38314-6191-102+2819ATP-dependent Clp protease ATP-binding subunit clpA homolog.>gb:AF041468_1763464 Guillardia theta complete plastid genom
gb:BA000045_742139181593e-38314-6191-102+2819Gloeobacter violaceus PCC 7421 DNA, complete genome.
pir|S76330|S76330191593e-38314-6191-102+2821endopeptidase Clp (EC 3.4.21.-) ATP-binding chain C [similarity] - Synechocystis sp. (strain PCC 6803)>gb:BA000022_68957
gb:AE017164_395563201586e-38314-6191-102+2856Prochlorococcus marinus subsp. marinus str. CCMP1375 section 4 of 6 of the complete genome.>gb:AE017126_1031232 Prochlor
gb:BA000039_726092211588e-38314-6191-102+2824Thermosynechococcus elongatus BP-1 DNA, complete genome.
gb:BX572098_798403221571e-37314-6191-102+2859Prochlorococcus marinus MIT9313 complete genome; segment 4/7.
gb:BX572092_796714231572e-37314-6191-102+2842Prochlorococcus marinus MED4 complete genome; segment 3/5.
sp|P51332|CLPC_PORPU241554e-37314-6191-102+2821ATP-dependent Clp protease ATP-binding subunit clpA homolog.>pir|S73253|S73253 endopeptidase Clp (EC 3.4.21.-) ATP-bindi
gb:AY673996_1621408251555e-37314-6191-102+2823Gracilaria tenuistipitata var. liui chloroplast, complete genome.
sp|Q9TM05|CLPC_CYACA261463e-34308-61930-133+2854ATP-dependent Clp protease ATP-binding subunit clpA homolog.>gb:AF022186_1761876 Cyanidium caldarium strain RK1 chloropl
gb:AB002583_1508807271449e-34314-6191-102+2821Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D.
gb:BA000045_742143281411e-32314-6191-102+2330Gloeobacter violaceus PCC 7421 DNA, complete genome.
pir|AE2051|AE2051301224e-27314-6191-102+2814endopeptidase Clp ATP-binding chain [imported] - Nostoc sp. (strain PCC 7120)>gb:BA000019_682952 Nostoc sp. PCC 7120 DN
pir|T47485|T47485291182e-27314-5621-83+2341clpC-like protein - Arabidopsis thaliana>gb:ATF9K21_1551403 Arabidopsis thaliana DNA chromosome 3, BAC clone F9K21.
sp|P49574|CLPC_ODOSI311132e-24314-6191-102+2885ATP-dependent Clp protease ATP-binding subunit clpA homolog.>pir|S78246|S78246 endopeptidase Clp (EC 3.4.21.-) ATP-bindi
gb:AE000516_23831321055e-22314-6191-102+2848Mycobacterium tuberculosis CDC1551, complete genome.
gb:BA000030_702584331058e-22314-6191-102+2841Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
gb:BA000030_700486341058e-22314-6191-102+2842Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
pir|T36384|T36384351058e-22314-6191-102+2841probable ATP-binding proteinase - Streptomyces coelicolor>gb:SCO939116_177046 Streptomyces coelicolor A3(2) complete gen
gb:AP006618_556806361041e-21314-6191-102+2851Nocardia farcinica IFM 10152 DNA, complete genome.
gb:AE017228_411166371041e-21314-6191-102+2843Mycobacterium avium subsp. paratuberculosis str. k10, section 2 of 16 of the complete genome.>gb:AE016958_1054570 Mycoba
sp|O06286|CLPC_MYCTU381041e-21314-6191-102+2848Probable ATP-dependent Clp protease ATP-binding subunit.>pir|E70954|E70954 endopeptidase Clp (EC 3.4.21.-) ATP-binding c
gb:BX248359_763248391041e-21314-6196-107+2883Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 6/8.
gb:AX065707_1459767401032e-21314-6191-102+2327Sequence 51 from Patent WO0100842.
gb:BA000036_720405411032e-21314-6191-102+2925Corynebacterium glutamicum ATCC 13032 DNA, complete genome.>gb:BX927156_834211 Corynebacterium glutamicum ATCC 13032, IS
gb:BA000035_717310421033e-21314-6191-102+2927Corynebacterium efficiens YS-314 DNA, complete genome.
gb:MLPUTATP_148776431024e-21314-6191-102+2649Mycobacterium leprae DNA for putative atp operon.
pir|S11163|S11163441024e-21314-6191-102+2649endopeptidase Clp ATP-binding chain C - Mycobacterium leprae (fragment)
sp|P24428|CLPC_MYCLE451024e-21314-6191-102+2848Probable ATP-dependent Clp protease ATP-binding subunit.>pir|C86938|C86938 probable ATP-dependent Clp proteinase [import
gb:AE016850_348589461025e-21314-6195-106+2840Tropheryma whipplei str. Twist, section 1 of 3 of the complete genome.>gb:BX251410_764289 Tropheryma whipplei TW08/27, c
gb:AE016822_341056471002e-20314-6191-102+2839Leifsonia xyli subsp. xyli str. CTCB07, complete genome.
gb:AP006840_57031948994e-20314-6191-103+2833Symbiobacterium thermophilum DNA, complete genome.
gb:AE017283_43006849973e-19314-6191-102+2844Propionibacterium acnes KPA171202, complete genome.
gb:AE014295_31074950951e-18314-6191-102+2869Bifidobacterium longum NCC2705, complete genome.
gb:BA000043_73665551912e-17314-6192-102+2810Geobacillus kaustophilus HTA426 DNA, complete genome.
gb:MSGA15AGA_15037852912e-17314-6041-97+297M.leprae antigen 15 kDa gene, complete cds.
sp|P37571|CLPC_BACSU53912e-17314-6192-102+2810Negative regulator of genetic competence clpC/mecB.>pir|I40508|I40508 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain
gb:BA000028_69448054881e-16314-6192-102+2809Oceanobacillus iheyensis HTE831 DNA, complete genome.
pir|G83662|G8366255881e-16314-6192-102+2813class III stress response-related ATPase clpC [imported] - Bacillus halodurans (strain C-125)>gb:BA000004_654049 Bacillu
gb:CP000001_85071356881e-16314-6192-102+2811Bacillus cereus ZK, complete genome.
gb:AE017333_44604057881e-16314-6192-102+2810Bacillus licheniformis DSM 13, complete genome.>gb:CP000002_855863 Bacillus licheniformis ATCC 14580, complete genome.>g
gb:BX294144_76878358864e-16314-6191-103+2859Pirellula sp. strain 1 complete genome; segment 12/24.
gb:AE017024_38037759864e-16314-6192-102+2811Bacillus anthracis str. Ames section 1 of 18 of the complete genome.>gb:AE017225_405494 Bacillus anthracis str. Sterne,
gb:AE016998_37514060864e-16314-6192-102+2811Bacillus cereus ATCC 14579 section 1 of 18 of the complete genome.>gb:AE016877_1015390 Bacillus cereus ATCC 14579 comple
gb:AE017322_44268261827e-15314-6192-102+2820Listeria monocytogenes str. 4b F2365, section 1 of 10 of the complete genome.>gb:AE017262_1075038 Listeria monocytogenes
gb:LMU40604_14166162827e-15314-6192-102+2825Listeria monocytogenes ClpC ATPase (mec) gene, complete cds.
gb:CP000027_7907163827e-15317-6195-105+2824Dehalococcoides ethenogenes 195, complete genome.
pir|AI1465|AI146564827e-15314-6192-102+2820endopeptidase Clp ATP-binding chain C [imported] - Listeria innocua (strain Clip11262)>gb:AL596164_537611 Listeria innoc
pir|AI1103|AI110365827e-15314-6192-102+2820endopeptidase Clp ATP-binding chain C [imported] - Listeria monocytogenes (strain EGD-e)>gb:AL591974_534724 Listeria mon
gb:BA000045_74266366772e-13326-6199-106+2348Gloeobacter violaceus PCC 7421 DNA, complete genome.
gb:AE013175_28989367772e-13311-6192-103+2816Thermoanaerobacter tengcongensis MB4, section 202 of 244 of the complete genome.>gb:AE008691_1111958 Thermoanaerobacter
gb:AP006627_56244868772e-13314-6192-106+2818Bacillus clausii KSM-K16 DNA, complete genome.
gb:BA000033_71077269751e-12314-6192-102+2818Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2.
pir|F89819|F8981970751e-12314-6192-102+2818endopeptidase [imported] - Staphylococcus aureus (strain N315)>gb:BA000017_676222 Staphylococcus aureus subsp. aureus Mu
gb:AF497482_51655071727e-12446-6197-64+2797Micromonospora echinospora calicheamicin biosynthetic locus, complete sequence.
gb:CP000029_8078972711e-11314-6192-102+2817Staphylococcus epidermidis RP62A, complete genome.>gb:AE016744_321937 Staphylococcus epidermidis ATCC 12228, section 1 o
gb:BA000045_74161773712e-11314-6101-99+2778Gloeobacter violaceus PCC 7421 DNA, complete genome.
gb:BX908798_83106774702e-11314-6191-103+2847Parachlamydia-related symbiont UWE25, complete genome.
pir|G72079|G7207975702e-11314-6191-103+2845endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity] - Chlamydophila pneumoniae (strain CWL029)>gb:AE0016
sp|Q9Z8A6|CLPC_CHLPN76702e-11314-6191-103+2845Probable ATP-dependent Clp protease ATP-binding subunit.>pir|G81590|G81590 ATP-dependent Clp proteinase, ATP-binding cha
pir|H72404|H7240477695e-11314-6101-99+2820endopeptidase Clp, ATP-binding chain - Thermotoga maritima (strain MSB8)>gb:AE001705_38118 Thermotoga maritima MSB8 sec
pir|C86545|C8654578695e-11314-6191-103+2845ClpC proteinase [imported] - Chlamydophila pneumoniae (strain J138)>gb:BA000008_663808 Chlamydophila pneumoniae J138 ge
pir|C97292|C9729279696e-11314-6192-104+2813ATPases with chaperone activity clpC, two ATP-binding domain CAC3189 [imported] - Clostridium acetobutylicum>gb:AE007814
gb:AE016995_37441880698e-11314-6191-103+2846Chlamydophila caviae GPIC section 2 of 4 of the complete genome.>gb:AE015925_994097 Chlamydophila caviae GPIC complete g
sp|O84288|CLPC_CHLTR81698e-11314-6191-103+2854Probable ATP-dependent Clp protease ATP-binding subunit.>pir|C71533|C71533 endopeptidase Clp (EC 3.4.21.-) ATP-binding c
sp|Q9PKA8|CLPC_CHLMU82681e-10314-61917-119+2870Probable ATP-dependent Clp protease ATP-binding subunit.>pir|B81689|B81689 ATP-dependent Clp proteinase, ATP-binding cha
gb:AE015945_32164483681e-10314-6192-103+2811Clostridium tetani E88, section 10 of 10 of the complete genome.>gb:AE015927_964433 Clostridium tetani E88, complete gen
gb:AB083540_1052784621e-08377-61917-96+2175Bacillus cereus clpC gene for stress-related ATPase, partial cds.
pir|D75436|D7543685621e-08314-6101-99+2747ATP-dependent Clp proteinase, ATP-binding subunit ClpC - Deinococcus radiodurans (strain R1)>gb:AE001961_41388 Deinococc
gb:AE017288_43257586602e-08326-6194-103+2846Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, section 2 of 14 of the complete sequence.>
gb:AE011226_27062987602e-08326-6194-103+2846Leptospira interrogans serovar lai str. 56601 chromosome I, section 35 of 397 of the complete sequence.>gb:AE010300_1004
gb:AE017301_43581488596e-08323-6103-98+2736Thermus thermophilus HB27 section 1 of 7 of the complete genome.>gb:AP008226_577999 Thermus thermophilus HB8 genomic DNA
gb:AF401667_50758689581e-07326-6045-101+2709Lactobacillus sakei rrnC operon, partial sequence.
pir|B70412|B7041290581e-07314-6191-99+2810endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity] - Aquifex aeolicus>gb:AE000733_26677 Aquifex aeolicu
sp|Q54316|HLYB_TREHY91564e-07314-6191-105+2828Hemolysin B.>gb:SHTLYBA_183460 S.hyodysenteriae gene for tlyB hemolysin.
gb:AE016957_36721092565e-07314-6101-104+2831Enterococcus faecalis V583, section 11 of 11 of the complete genome.>gb:AE016830_993698 Enterococcus faecalis V583, comp
gb:AP004777_184491593557e-07308-61971-181+2938Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05.
gb:AY166599_158618194557e-07308-61971-181+2938Oryza sativa (indica cultivar-group) ATP-dependent Clp protease ATP-binding subunit precursor (CLPD1) mRNA, complete cds
gb:AL935254_55090895542e-06326-6165-104+2837Lactobacillus plantarum strain WCFS1 complete genome; segment 3/11.
gb:OSJN00288_169800996528e-06143-6193-174+2877Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02, complete sequence.
gb:BA000030_70252497503e-05317-61961-161+2229Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
gb:AP006618_56167898495e-05317-61993-196+2243Nocardia farcinica IFM 10152 DNA, complete genome.
pir|T36359|T3635999495e-05317-61995-195+2258hypothetical protein SCE9.40 - Streptomyces coelicolor>gb:SCO939116_177106 Streptomyces coelicolor A3(2) complete genome
gb:BA000045_740227100499e-05314-6101-102+2148Gloeobacter violaceus PCC 7421 DNA, complete genome.
pir|H72258|H72258101466e-04320-6105-106+2791endopeptidase Clp, ATP-binding chain - Thermotoga maritima (strain MSB8)>gb:AE001792_39290 Thermotoga maritima MSB8 sec
gb:AE017237_413492102457e-04317-61995-197+2250Mycobacterium avium subsp. paratuberculosis str. k10, section 11 of 16 of the complete genome.>gb:AE016958_1056896 Mycob
gb:AE017201_403706103450.001314-6101-99+2822Lactobacillus johnsonii NCC 533, section 2 of 7 of the complete genome.>gb:AE017198_1122193 Lactobacillus johnsonii NCC
gb:CP000033_88591104430.005314-6131-100+2825Lactobacillus acidophilus NCFM, complete genome.
gb:AE012798_285681105420.008326-6015-97+2854Chlorobium tepidum TLS section 19 of 194 of the complete genome.>gb:AE006470_932849 Chlorobium tepidum TLS complete geno
sp|P71964|YQ67_MYCTU106390.053317-61996-194+2252Hypothetical protein Rv2667/MT2741/Mb2686.>pir|G70967|G70967 probable clpX' protein - Mycobacterium tuberculosis (strain
gb:AY037264_1560158107390.069311-61978-190+2640Arabidopsis thaliana AT5g51070/K3K7_27 mRNA, complete cds.
gb:AY224707_599174108390.069356-5172-55+2166Bacillus cereus strain 391-98 ClpC (clpC) gene, partial cds.
gb:AY224705_599172109390.069356-5172-55+2166Bacillus weihenstephanensis strain WSBC 10311 ClpC (clpC) gene, partial cds.>gb:AY224706_599173 Bacillus weihenstephanen
gb:AY224703_599170110390.069356-5172-55+2166Bacillus weihenstephanensis strain WSBC 10206 ClpC (clpC) gene, partial cds.
gb:AY224698_599165111390.069356-5172-55+2166Bacillus cereus strain BGSC 6A5 ClpC (clpC) gene, partial cds.>gb:AY224699_599166 Bacillus thuringiensis serovar canaden
gb:AY224696_599163112390.069356-5172-55+2166Bacillus thuringiensis serovar israelensis strain ATCC 35646 ClpC (clpC) gene, partial cds.>gb:AY224697_599164 Bacillus
sp|P42762|ERD1_ARATH113390.069311-61978-190+2945ERD1 protein, chloroplast precursor.>pir|JN0901|JN0901 endopeptidase Clp ATP-binding chain C - Arabidopsis thaliana>gb:A
gb:BA000016_675481114380.12320-6164-102+2814Clostridium perfringens str. 13 DNA, complete genome.
gb:CR522870_100755115380.15320-5354-82+2868Desulfotalea psychrophila LSv54 chromosome.
gb:AB070947_9325116370.34317-61690-188+2234Streptomyces avermitilis polyketide-9 biosynthetic gene cluster.>gb:BA000030_700272 Streptomyces avermitilis MA-4680 gen
pir|A83589|A83589117350.76320-6195-104+2850probable ClpA/B proteinase ATP binding subunit PA0459 [imported] - Pseudomonas aeruginosa (strain PAO1)>gb:AE004483_5469
gb:BA000030_705128118350.99323-6195-108+2879Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
gb:AF027500_470374119334.9326-51715-78+2631Aquifex pyrophilus alanyl-tRNA synthetase (alaS) gene, complete cds; and ATP-dependent Clp protease regulatory subunit (