Clone JMFS096B10 [sequences]

previous contigF:011109 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:BVU313093_164319712011e-5012-575131-316+3356Beta vulgaris mRNA for salt tolerance protein 2 (sato2 gene).
gb:AF110226_176876722002e-509-57270-255+3299Nicotiana tabacum nuclear RNA binding protein (RggA) mRNA, partial cds.
gb:AF110228_176876931817e-4512-575126-311+3356Spinacia oleracea nuclear RNA binding protein A (RggA) mRNA, complete cds.
gb:BVU313092_164319641688e-4112-572130-314+3356Beta vulgaris mRNA for salt tolerance protein 1 (sato1 gene).
gb:AF110229_176877051663e-4012-57212-195+3240Spinacia oleracea nuclear RNA binding protein B (RggB) mRNA, partial cds.
pir|T12180|T1218061632e-3912-575140-324+3370probable transcription factor - fava bean>gb:VFPTF1_1727183 V.faba mRNA for putative transciption factor (1556bp).
pir|F71435|F7143571632e-3912-575131-310+3355probable nuclear antigen - Arabidopsis thaliana>gb:ATCHRIV45_1545485 Arabidopsis thaliana DNA chromosome 4, contig fragm
gb:AF110230_176877181625e-3912-57223-206+3247Spinacia oleracea nuclear RNA binding protein C (RggC) mRNA, partial cds.
gb:AC105260_173788491602e-3812-575143-335+3383Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence.>gb:AC136216_1742992 Oryza sativ
gb:AY084828_1569911101595e-3812-575130-309+3354Arabidopsis thaliana clone 118826 mRNA, complete sequence.
gb:AP003022_1824290111588e-3812-575137-329+3378Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11.>gb:AP003330_1828026 Oryza sativa (
gb:AP003292_1827445121555e-379-575141-332+3380Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02.
gb:AY087413_1572444131524e-3612-575118-301+3360Arabidopsis thaliana clone 35156 mRNA, complete sequence.
gb:AY085859_1570923141517e-3612-572130-314+3357Arabidopsis thaliana clone 19104 mRNA, complete sequence.
gb:AB018117_1513849151517e-3612-572130-314+3357Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQL5.>gb:AY140040_1582480 Arabidopsis thaliana putative protein
pir|G71444|G71444161494e-3512-575118-301+3360hypothetical protein - Arabidopsis thaliana>gb:ATCHRIV46_1545554 Arabidopsis thaliana DNA chromosome 4, contig fragment
gb:AC121365_1740192171432e-3312-575157-345+3390Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence.
gb:AY560385_161490318829e-15318-57517-104+3115Tagetes minuta thermoinhibition-associated THB-4 protein mRNA, partial cds.
gb:AC092852_173578519642e-09228-572246-358+3642Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence.
gb:BC067912_255489820503e-0512-368188-302+3406Xenopus tropicalis hypothetical protein MGC69561, mRNA (cDNA clone MGC:69561 IMAGE:5379016), complete cds.
gb:AE014297_114133621497e-056-455127-263+3412Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE014297_1141337 Drosophila melanogaster chromosome 3R, com
gb:AE014297_114133522497e-056-455158-294+3443Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003750_1223328 Drosophila melanogaster chromosome 3R, sec
gb:FRU90880_257218523473e-0412-470142-280+3361Takifugu rubripes isotocin and vasotocin locus.
gb:BC013665_209187924464e-0412-368173-282+3386Mus musculus RIKEN cDNA 1200009K13 gene, mRNA (cDNA clone MGC:18794 IMAGE:4193513), complete cds.>gb:BC030502_2096836 Mu
gb:AK088278_117530425464e-0412-368173-282+3386Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430009L23 product:HYPOT
gb:BC079337_210745826466e-0412-368173-288+3392Rattus norvegicus PAI-1 mRNA-binding protein, mRNA (cDNA clone MGC:94773 IMAGE:7106027), complete cds.
gb:AF388527_206469127466e-0412-368173-288+3392Rattus norvegicus hypothetical RNA binding protein RDA288 mRNA, complete cds.
gb:AP003292_182744628457e-04423-5751-53+3101Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02.
gb:AK010860_115603629457e-0412-368173-288+3392Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2500003B06 product:HYPOTHETICAL RNA BI
gb:BC083399_256322630440.00266-368153-247+3347Danio rerio zgc:103482, mRNA (cDNA clone MGC:103482 IMAGE:7237781), complete cds.
gb:BC059961_255274131440.00212-359195-300+3404Xenopus laevis hypothetical protein MGC68500, mRNA (cDNA clone MGC:68500 IMAGE:4030568), complete cds.
gb:BC046574_254963332440.0026-368173-288+3392Xenopus laevis hypothetical protein MGC53445, mRNA (cDNA clone MGC:53445 IMAGE:5571963), complete cds.
gb:BC046876_254977533440.00312-368175-283+3391Danio rerio zgc:55489, mRNA (cDNA clone MGC:55489 IMAGE:2640661), complete cds.>gb:BC068350_2555038 Danio rerio zgc:5548
gb:HSM807283_118783434420.00812-368173-283+3387Homo sapiens mRNA; cDNA DKFZp686P17171 (from clone DKFZp686P17171).
pir|T12456|T1245635420.00812-368173-283+3387hypothetical protein DKFZp564M2423.1 - human>gb:HSM800628_1185885 Homo sapiens mRNA; cDNA DKFZp564M2423 (from clone DKFZ
pir|D88042|D8804236420.01124-179163-217+3378protein F56D12.5 [imported] - Caenorhabditis elegans>gb:AF016672_1232685 Caenorhabditis elegans cosmid F56D12, complete
gb:AY032853_193453937410.01412-36889-205+3309Homo sapiens CGI-55 mRNA, partial cds.
gb:AL590559_192970038410.01412-368173-289+3393Human DNA sequence from clone RP11-393N21 on chromosome 1 Contains the 5' end of the gene for PAI-1 mRNA-binding protein
gb:AF151813_188629939410.01412-368173-289+3393Homo sapiens CGI-55 protein mRNA, complete cds.
gb:BC070578_255555740410.01812-398169-288+3379Xenopus laevis hypothetical protein MGC81067, mRNA (cDNA clone MGC:81067 IMAGE:6316528), complete cds.
gb:AE014134_112924441410.01845-458211-341+3490Drosophila melanogaster chromosome 2L, complete sequence.>gb:AE014134_1129245 Drosophila melanogaster chromosome 2L, com
gb:CR380952_165059942400.04169-23617-65+386Candida glabrata strain CBS138 chromosome F complete sequence.
gb:AY672709_134550943390.05393-458163-266+3331Strongyloides ratti ALT-1 mRNA, complete cds.>gb:AY672710_1345510 Strongyloides ratti ALT-1 gene, complete cds.
gb:BC002488_196815444390.09112-368173-298+3402Homo sapiens PAI-1 mRNA-binding protein, mRNA (cDNA clone MGC:1357 IMAGE:3051198), complete cds.
gb:AL590559_192969945390.09112-368173-298+3402Human DNA sequence from clone RP11-393N21 on chromosome 1 Contains the 5' end of the gene for PAI-1 mRNA-binding protein
gb:AC092263_173526546390.091235-516160-243-3383Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence.
pir|T02367|T0236747380.123-461166-320+31684hypothetical protein T8F5.22 - Arabidopsis thaliana>gb:AE005173_894197 Arabidopsis thaliana chromosome 1, bottom arm com
gb:AL590559_192970148380.1612-368173-304+3408Human DNA sequence from clone RP11-393N21 on chromosome 1 Contains the 5' end of the gene for PAI-1 mRNA-binding protein
gb:CQ783786_145262949380.1612-368173-304+3408Sequence 3926 from Patent EP1396543.>gb:AK074970_1912810 Homo sapiens cDNA FLJ90489 fis, clone NT2RP3003473.
gb:AK045190_116730150370.2612-164173-231+3235Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130045C05 product:HYPOTHETI
gb:AK004678_115250351370.2612-164173-231+3407Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200009K13 product:HYPOTHETICAL RNA BINDING
gb:AE016819_174934052360.45111-16432-49+386Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence.
gb:YSCECT1_172884453360.59105-16430-49+365Yeast DNA for CTP: phosphoethanolamine cytidylyltransferase and ORFs, complete cds.
gb:AC003680_153119454360.5966-275341-396+3764Arabidopsis thaliana chromosome 2 BAC F17K2 genomic sequence, complete sequence.>gb:AY039997_1560500 Arabidopsis thalian
pir|T00875|T0087555360.5966-275341-396+3759hypothetical protein At2g45620 [imported] - Arabidopsis thaliana
pir|S12201|S1220156360.59105-16430-49+384ATP synthase regulatory factor, 15K - yeast (Saccharomyces cerevisiae)>gb:AY558270_1614497 Saccharomyces cerevisiae clon
sp|P16965|STF2_YEAST57360.59105-16429-48+383ATPase stabilizing factor 15 kDa protein.
gb:AE016818_174826158350.779-24565-137+3665Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence.
gb:HS1LATA_243707059351.0274-47459-113-3305Herpes simplex virus type one (HSV-1) latency associated transcript (LAT).
gb:AP005678_185584660351.012-161121-170+3177Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_F08.>gb:AP005704_1856384 Oryza sativa
gb:AE017351_175953461351.09-458289-445+31049Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence.
gb:AY054208_156303062351.012-257166-238+3350Arabidopsis thaliana At1g76010/T4O12_22 mRNA, complete cds.>gb:AY124847_1580212 Arabidopsis thaliana At1g76010/T4O12_22
pir|F96788|F9678863351.012-257185-257+3369protein T4O12.22 [imported] - Arabidopsis thaliana>gb:AE005173_895135 Arabidopsis thaliana chromosome 1, bottom arm comp
gb:AF232689_221891764351.327-194339-390+3667Rat cytomegalovirus Maastricht, complete genome.
gb:NCB9B11_169039465351.312-269613-694+3717Neurospora crassa DNA linkage group II BAC clone B9B11.
sp|P17588|LRP1_HHV1F66351.3274-47427-81-3340Latency-related protein 1.>pir|A33337|WMBEL1 latency-related protein 1 - human herpesvirus 1 (strain F)>gb:HS1LATRA_2437
gb:HS1LSSDS_243707467341.7274-47427-81-3272Herpes simplex virus type 1 latency-associated transcript mRNA.
gb:CR382130_166286268341.76-275759-845+3913Yarrowia lipolytica chromosome D of strain CLIB99 of Yarrowia lipolytica.
gb:AF066072_123781269341.7268-48910-77-3135Dictyostelium discoideum SP85 (pspB) gene, partial cds.
gb:BC068016_255498570342.2262-459345-408-3711Danio rerio zgc:76890, mRNA (cDNA clone MGC:76890 IMAGE:6520167), complete cds.
gb:AP002855_182320371342.2268-456401-463-3539Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08.
gb:AF318582_178561672342.2268-456292-354-3430Oryza sativa putative transcription factor OsGLK2 (Glk2) mRNA, partial cds.
gb:AF066073_123781373342.2298-48910-65-3139Dictyostelium discoideum SP85 (pspB) gene, partial cds.
gb:BC067982_255496674332.936-18571-129+3458Xenopus tropicalis hypothetical protein MGC69337, mRNA (cDNA clone MGC:69337 IMAGE:5309034), complete cds.
gb:BC048225_255003875332.936-15269-113+3455Xenopus laevis programmed cell death 4, mRNA (cDNA clone MGC:53295 IMAGE:5570381), complete cds.
gb:AF410847_225207276332.912-209131-196+3495Ovine herpesvirus 2 latency associated antigen (orf73) gene, complete cds.
gb:AF232689_221889577332.939-26063-144+3218Rat cytomegalovirus Maastricht, complete genome.
pir|S53404|S5340478332.9105-28130-81+386ATP synthase regulatory factor homolog YLR327c - yeast (Saccharomyces cerevisiae)>gb:YSCL8543_1729595 Saccharomyces cer
sp|Q06177|STFL_YEAST79332.9105-28129-80+385STF2-like protein YLR327c.
gb:ATMAJ23_155371580333.89-458136-297+3407Arabidopsis thaliana DNA chromosome 5, P1 clone MAJ23 (ESSA project).>gb:BT015827_1642445 Arabidopsis thaliana At5g10660
gb:SDMA3APOP_139738581333.878-17392-124+3463Suberites domuncula mRNA for apoptosis gene MA3.
gb:AP003205_182512582335.027-281245-331+3349Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1146B04.
gb:AE016820_175002783335.03-2814258-4347+34899Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence.
gb:AY064109_129370384335.09-359167-278+3419Aedes aegypti clone i29Mc4 putative mRNA binding protein (mRNABP) mRNA, complete cds.
gb:AY064107_129370185335.09-359167-278+3419Aedes aegypti clone i29Rc5 putative mRNA binding protein (mRNABP) mRNA, complete cds.
gb:HUMMUCCF_203497286326.569-15257-84-1294Homo sapiens mucin (mucin) mRNA, partial cds.
gb:CR382133_166657887326.5105-17930-54+392Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii.
gb:AY137777_130304988326.512-260114-196+3260Plasmodium vivax isolate PvSK1 circumsporozoite protein (csp) gene, partial cds.
gb:AY033620_128837189326.566-359184-278+3419Aedes aegypti strain RED putative RNA-binding protein (RNABP) mRNA, complete cds.
gb:AF215741_125165890326.512-260112-194+3277Plasmodium vivax isolate SK-B circumsporozoite protein (CSP) gene, partial cds.
pir|A37232|A3723291326.569-15257-84-1294mucin, tracheal (AMN-22) - human (fragment)
gb:SHE410493_245148592328.512-275155-245+3501Saimiriine herpesvirus 2 complete L-DNA sequence, strain C488.
gb:AF539999_227333093328.56-12824-65+376Mamestra configurata nucleopolyhedrovirus A 90/4, complete genome.>gb:MBU59461_2441920 Mamestra configurata nucleopolyhe
gb:HUMMUC2A_203496494328.569-155536-564-1573Human mucin-2 gene, partial cds.
gb:AP006058_186064895328.527-281106-192+3210Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0066B16.>gb:AP006058_1860649 Oryza sat
gb:AP001306_182108396328.5268-38749-87-31480Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MKA23.
gb:CR382129_166177697328.56-275647-737+31114Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica.
gb:CR382129_166169398328.578-26683-155+3269Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica.
gb:CR382129_166156599328.5105-20923-54+393Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica.
gb:PVI295636_1396139100328.512-260152-234+3368Plasmodium vivax partial CSP gene for circumsporozoite protein.
gb:PVI278612_1396126101328.512-260154-236+3370Plasmodium vivax partial CSP gene for circumsporozoite protein, strain KPVCSP96-42.
gb:PVI278611_1396125102328.512-260177-259+3393Plasmodium vivax partial csp gene for circumsporozoite protein, strain KPVCSP96-25.
gb:AF316579_1261805103328.512-260101-183+3317Plasmodium vivax strain KNIH CSP99-056 circumsporozoite protein gene, partial cds.>gb:AF316583_1261809 Plasmodium vivax
gb:AF236849_1253744104328.512-26091-173+3302Plasmodium vivax isolate SK974601 circumsporozoite protein (csp) gene, partial cds.
gb:AF236848_1253743105328.512-26091-173+3302Plasmodium vivax isolate SK98007 circumsporozoite protein (csp) gene, partial cds.
gb:AF164605_1246694106328.512-260154-236+3370Plasmodium vivax isolate KCSP97-1 circumsporozoite protein gene, partial cds.
gb:AF164603_1246692107328.512-260154-236+3370Plasmodium vivax isolate KCSP96-11 circumsporozoite protein gene, partial cds.
gb:AC117075_1207757108328.5307-489195-255-3532Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence.>gb:AF066071_1237811 Dictyosteli
gb:AE017340_456876109328.5150-413144-237+3716Idiomarina loihiensis L2TR, complete genome.
gb:AE016922_358373110328.521-281228-318+3413Chromobacterium violaceum ATCC 12472 section 13 of 16 of the complete genome.>gb:AE016825_1043527 Chromobacterium violac
pir|A49963|A43932111328.569-1551878-1906-13020mucin 2 precursor, intestinal - human (fragments)
pir|A71441|A71441112328.578-425328-448+3527probable myosin heavy chain - Arabidopsis thaliana>gb:ATCHRIV46_1545523 Arabidopsis thaliana DNA chromosome 4, contig fr
pir|A85068|A85068113328.524-203398-462+3504U3 snoRNP-associated-like protein [imported] - Arabidopsis thaliana>gb:ATCHRIV15_1544385 Arabidopsis thaliana DNA chromo
sp|Q61496|DDX4_MOUSE114328.512-230158-245+3702DEAD-box protein 4 (VASA homolog) (Mvh).>gb:AK014844_1158159 Mus musculus adult male testis cDNA, RIKEN full-length enri