Clone JMFS090D01 [sequences]

previous contigF:003392 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AP003875_18346711896e-1775-266337-400+3422Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_C05.>gb:AP003919_1835227 Oryza sativa
gb:OSJN00253_16974362842e-1518-59916-234+3505Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08, complete sequence.
gb:OSJN00255_16974963741e-1257-29620-108+3438Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence.
gb:AB030709_15185344734e-1287-2633-61+3353Triticum aestivum gene for AHM2, partial cds.
gb:OSJN00209_16967385729e-1251-590111-251+3385Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09, complete sequence.
gb:AB025603_15162446657e-10318-5962-93+3746Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F17P19.
gb:AY136403_15819047659e-10348-59610-93+3746Arabidopsis thaliana unknown protein (At5g52230) mRNA, complete cds.>gb:BT000226_1634504 Arabidopsis thaliana unknown pr
gb:OSJN00167_16960668643e-0993-5818-197+3377Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0040D17, complete sequence.
gb:AY863050_16309849643e-0963-26320-86+3292Zea mays methyl-binding domain protein MBD113 mRNA, complete cds.
gb:OSJN00120_169523210602e-0869-58130-220+3418Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033G08, complete sequence.
gb:OSJN00120_169523811598e-0830-58112-220+3336Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033G08, complete sequence.>gb:OSJN00167_1696059 Oryza sativa g
gb:AY086606_157165312496e-0593-28435-99+3182Arabidopsis thaliana clone 261609 mRNA, complete sequence.
pir|T45595|T4559513496e-0593-28435-99+3182hypothetical protein F12A12.100 - Arabidopsis thaliana>gb:ATF12A12_1548299 Arabidopsis thaliana DNA chromosome 3, BAC cl
gb:HSMECP2X_201869814420.008186-58110-149+3486H.sapiens mRNA for methyl-CpG-binding protein 2.
gb:HSMECP2_201869715420.008186-5811-140+3477H.sapiens MeCP-2 gene.
gb:HSM806231_201824516420.008186-58140-179+3516Homo sapiens mRNA; cDNA DKFZp686A24160 (from clone DKFZp686A24160).
gb:AY541280_195633317420.008186-58122-161+3498Homo sapiens methyl CpG binding protein 2 isoform B (MECP2) mRNA, complete cds.
sp|P51608|MEC2_HUMAN18420.008186-58110-149+3486Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2).>gb:AF030876_1877681 Homo sapiens chromosome X clone Qc-8D3, RP4-6
gb:AF051768_247074719420.010249-58133-150+3467Xenopus laevis methyl-CpG-binding protein 2 mRNA, complete cds.>gb:AF106951_2473965 Xenopus laevis methyl-CpG-binding pr
gb:AF295597_189548420420.010240-58129-149+3486Macaca fascicularis methyl-CpG-binding protein 2 (MECP2) mRNA, complete cds.
sp|Q00566|MEC2_RAT21420.010240-58129-149+3492Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2).>pir|A41907|A41907 methyl-CpG-binding protein 2 - rat>gb:RATMECP2A
gb:AX886192_148164522410.013192-58124-161+3219Sequence 2055 from Patent EP1033401.
sp|Q9Z2D6|MEC2_MOUSE23400.023252-58133-149+3484Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2).>gb:AF072251_2053361 Mus musculus methyl-CpG binding protein 2 (Me
gb:HSRNACPGB_202003524400.030186-5811-139+3476H.sapiens mRNA for methyl CpG binding protein 2.
pir|S57963|S5796325400.030186-5811-139+3476methyl CpG binding protein 2 - human (fragment)
gb:AB025604_151625326400.03993-24281-131+3225Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F2O15.>gb:BT004606_1637640 Arabidopsis thaliana At5g59380 gene
gb:AY888006_254764927380.1193-40112-117+3257Gallus gallus methyl-CpG-binding domain protein 2 (MBD2) mRNA, complete cds.
gb:AB084168_246371028380.15429-5639-53+3283Xenopus laevis mRNA for methyl-CpG binding protein MBD3, complete cds.
gb:BC066079_210570829380.15192-479413-500+3919Mus musculus RIKEN cDNA 6330407J23 gene, mRNA (cDNA clone MGC:91342 IMAGE:30355520), complete cds.
gb:HSJ403A15_201611330380.15192-479415-502+3947Human DNA sequence from clone RP3-403A15 on chromosome 6q22.31-23.1 Contains the 3' end of a novel gene, the gene KIAA04
gb:AK018139_115945931380.15192-479101-188+3633Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330407J23 product:hypothetica
gb:BC024812_209473332370.196-22146-115+3554Mus musculus methyl-CpG binding domain protein 4, mRNA (cDNA clone MGC:36060 IMAGE:5356016), complete cds.
gb:AF072249_205336033370.196-22146-115+3554Mus musculus methyl-CpG binding protein MBD4 (Mbd4) mRNA, complete cds.>gb:AF120996_2055353 Mus musculus domesticus meth
gb:GGARBP_257292734370.25327-58174-150+3344Gallus gallus mRNA for attachment region binding protein (ARBP).
gb:AY298900_252576735370.25327-56682-152+3524Danio rerio methyl-cytosine binding protein 2 (mecp2) mRNA, complete cds.
gb:AP005907_185988836370.2596-275178-239+3254Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1151D08.
gb:NCB9G16_169043537370.25135-425168-260+3325Neurospora crassa DNA linkage group II BAC clone B9G16.
gb:CP000019_87017438370.33213-521174-288+3323Haemophilus somnus 129PT plasmid pHS129, complete sequence.
gb:BA000026_69350839360.56156-443649-742+3801Mycoplasma penetrans HF-2 DNA, complete genome.
gb:AB061672_246290640350.7478-3866-111+3267Xenopus laevis mRNA for methyl-CpG binding protein MBD2, complete cds.
gb:HSMETHYL2_201871441350.74402-581141-204+3302Homo sapiens methyl-CpG binding protein 2 (MBD2) gene, exon 2 and alternatively spliced testis-specific methyl-CpG bindi
gb:AF072242_188085342350.74402-581141-204+3411Homo sapiens methyl-CpG binding protein MBD2 (MBD2) mRNA, complete cds.>gb:BC032638_1980587 Homo sapiens methyl-CpG bind
gb:BC071531_255626743350.9693-40111-115+3273Danio rerio methyl-CpG binding domain protein 3a, mRNA (cDNA clone MGC:86913 IMAGE:6905673), complete cds.
gb:AB015475_151257044350.9693-221182-222+3306Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMN10.>gb:BT014975_1641945 Arabidopsis thaliana At5g59800 gene,
gb:AF072245_205335845351.3402-563144-200+3249Mus musculus testis specific methyl-CpG binding protein MBD2 (Mbd2) mRNA, complete cds.>gb:MM2MBD1_2113737 Mus musculus
gb:AF072243_205335646351.3402-563144-200+3414Mus musculus methyl-CpG binding protein MBD2 (Mbd2) mRNA, complete cds.>gb:BC046607_2099310 Mus musculus methyl-CpG bind
gb:AY398379_253190947341.693-40111-115+3273Danio rerio clone RK121A1A12 methyl-CpG binding domain protein 3 (MBD3) mRNA, complete cds.
gb:BC065234_198676948341.6165-470167-258+3798Homo sapiens KIAA0423, mRNA (cDNA clone IMAGE:6161345), partial cds.
gb:AB007883_186400949341.6165-4701145-1236+31723Homo sapiens KIAA0423 mRNA, partial cds.
gb:CR382133_166627650341.6117-26324-71+3452Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii.
gb:CR749557_118112751341.6165-4701086-1177+31504Homo sapiens mRNA; cDNA DKFZp686D12126 (from clone DKFZp686D12126).
pir|T00057|T0005752341.6165-4701118-1209+31696hypothetical protein KIAA0423 - human (fragment)
gb:AE014297_113918153342.157-440358-485+31081Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003695_1221174 Drosophila melanogaster chromosome 3R, sec
gb:AE014297_113918054342.157-440446-573+31169Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003695_1221173 Drosophila melanogaster chromosome 3R, sec
sp|Q58817|RFCS_METJA55342.1186-380376-448+31847Replication factor C small subunit (RFC small subunit) (Clamp loader small subunit) [Contains: Mja RFC-1 intein; Mja RFC
gb:AY238336_252138756332.893-40111-117+3256Danio rerio methyl-CpG binding protein 2 (mbd2) mRNA, complete cds.
gb:AF483827_127572157332.8129-380167-245+3515Dictyostelium discoideum PteN mRNA, complete cds.
gb:AF467431_127370058332.8129-380167-245+3533Dictyostelium discoideum Pten 3-phosphoinositide phosphatase alpha (ptenA) mRNA, complete cds.
sp|P53227|YG1T_YEAST59332.8255-458122-196+3271Hypothetical 31.0 kDa protein in BUD9-RME1 intergenic region.>pir|S64333|S64333 hypothetical protein YGR042w - yeast (Sa
gb:BC060619_210409760333.733-359348-460+3745Mus musculus TPX2, microtubule-associated protein homolog (Xenopus laevis), mRNA (cDNA clone MGC:79188 IMAGE:6812536), c
gb:AC116551_120636261333.7267-410946-993+31033Dictyostelium discoideum chromosome 2 map complement(581327-427576) strain AX4, complete sequence.
gb:AK011311_115632362333.733-359298-410+3695Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610005B21 product:similar to RES
gb:AF170346_247829163334.8444-56313-52+3282Xenopus laevis methyl-CpG binding protein MBD3 (MBD3) mRNA, complete cds.
gb:D80009_199491964334.8219-365789-834+31285Homo sapiens KIAA0187 mRNA, partial cds.
gb:BC043345_198338665334.8219-365786-831+31282Homo sapiens BMS1-like, ribosome assembly protein (yeast), mRNA (cDNA clone MGC:49890 IMAGE:6062924), complete cds.
gb:AY238339_131218866334.8435-58111-60+3326Branchiostoma floridae methyl-CpG binding protein 2/3 (Mbd2/3) mRNA, complete cds.
gb:CR861422_118541767334.8219-365787-832+31283Pongo pygmaeus mRNA; cDNA DKFZp459P022 (from clone DKFZp459P022).
gb:EFAJ3161_13517868334.8147-356155-216+3240Enterococcus faecalis plasmid pS86, rep86 and mob86 genes.>gb:ENERPA_135625 Enterococcus faecalis replication protein DN
pir|T04274|T0427469334.86-365589-695+31067hypothetical protein F20B18.300 - Arabidopsis thaliana>gb:ATCHRIV64_1546500 Arabidopsis thaliana DNA chromosome 4, conti
sp|Q14692|BMS1_HUMAN70334.8219-365786-831+31282Ribosome biogenesis protein BMS1 homolog.>gb:HSY214H10_2028542 Human DNA sequence from clone XX-Y214H10 on chromosome 10
gb:BC074695_255818971326.2429-5849-61+3301Xenopus tropicalis methyl-CpG binding domain protein 3, mRNA (cDNA clone MGC:69548 IMAGE:5336695), complete cds.
gb:AL591589_250400372326.215-43164-209+3517Zebrafish DNA sequence from clone BUSM1-198M22 in linkage group 2 Contains a novel gene similar to PAK2 (p21 (CDKN1A)-ac
pir|PN0009|PN000973326.2168-512590-709+3784neurofilament triplet M protein - Pacific electric ray (fragment)
gb:XLU85969_258354574328.2198-470713-805+3897Xenopus laevis middle molecular weight neurofilament protein NF-M(1) mRNA, complete cds.
gb:BC074454_255795675328.2198-470698-790+3843Xenopus laevis middle molecular weight neurofilament protein NF-M(1), mRNA (cDNA clone MGC:84735 IMAGE:6949051), complet
gb:AY534259_208636676328.2416-493138-163-1509Rattus norvegicus XK-related protein 5 mRNA, complete cds.
gb:AF072248_205335977328.293-22111-53+3285Mus musculus methyl-CpG binding domain-containing protein MBD3 (Mbd3) mRNA, complete cds.>gb:AF120995_2055352 Mus muscul
gb:AC005943_187506078328.293-22111-53+3291Homo sapiens chromosome 19, cosmid R30538, complete sequence.>gb:AF072247_1880855 Homo sapiens methyl-CpG binding domain
gb:AY497556_150142179328.2258-392532-588+3775Aeromonas phage 65 DNA replication gene cluster, partial sequence.
gb:PFMAL13_119150580328.2159-4311376-1458+31498Plasmodium falciparum 3D7 chromosome 13, *** SEQUENCING IN PROGRESS ***, 33 ordered pieces.
gb:AF374376_118815081328.2258-416396-448+3765Oikopleura dioica clone BAC clone 001, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces.
gb:AE014187_93915882328.2485-604847-887+21281Plasmodium falciparum 3D7 chromosome 14 complete sequence.>gb:AE014827_1228234 Plasmodium falciparum 3D7 chromosome 14 s
pir|T19593|T1959383328.2303-512256-324-3405hypothetical protein C31A11.3 - Caenorhabditis elegans>gb:CEC31A11_1360822 Caenorhabditis elegans cosmid C31A11, complet