Clone JMFS073F05 [sequences]

previous contigF:003477 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:BT003850_163697812116e-54175-61537-185+1209Arabidopsis thaliana clone RAFL15-48-D07 (R20842) putative VAMP protein SEC22 (At3g11660) mRNA, complete cds.
gb:ATAC009918_154309722111e-53175-61537-185+1209Arabidopsis thaliana chromosome III BAC T19F11 genomic sequence, complete sequence.>gb:AY088586_1573603 Arabidopsis thal
pir|B84775|B8477532025e-51175-61540-186+1210probable harpin-induced protein [imported] - Arabidopsis thaliana>gb:AC007017_1534957 Arabidopsis thaliana chromosome 2
pir|T08452|T0845241918e-48175-61538-184+1208hypothetical protein F22O6.150 - Arabidopsis thaliana>gb:ATF22O6_1549704 Arabidopsis thaliana DNA chromosome 3, BAC clon
pir|T49138|T4913851872e-46175-60339-181+1206hypothetical protein T10D17.10 - Arabidopsis thaliana>gb:ATT10D17_1554213 Arabidopsis thaliana DNA chromosome 3, BAC clo
gb:AB006700_150990261856e-46175-61839-188+1207Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHF15.>gb:BT010935_1640881 Arabidopsis thaliana At5g06330 gene,
pir|C84775|C8477571725e-42181-61543-187+1211probable harpin-induced protein [imported] - Arabidopsis thaliana>gb:AC007017_1534956 Arabidopsis thaliana chromosome 2
pir|A85098|A8509881717e-42175-61541-187+1211hypothetical protein AT4g09590 [imported] - Arabidopsis thaliana>gb:ATCHRIV27_1544673 Arabidopsis thaliana DNA chromosom
gb:ATT6G21_155633291663e-40175-60343-185+1210Arabidopsis thaliana DNA chromosome 5, BAC clone T6G21 (ESSA project).
gb:AB017066_1513388101402e-32175-61246-193+1213Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MGN6.>gb:BT010854_1640800 Arabidopsis thaliana At5g53730 mRNA,
gb:AP004753_1844431111394e-32175-60339-180+1224Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05.>gb:AP005609_1854844 Oryza sativa (
gb:AP004654_1842725121388e-32115-61520-199+1227Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07.
gb:OSJN00010_1693230131371e-31175-60338-179+1220Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence.>gb:OSJN00036_1693688 Oryza sativa gen
gb:OSJN00092_1694769141272e-28175-61543-192+1220Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence.
pir|T01376|T01376151101e-23175-60938-182+1202hypothetical protein F3D13.5 - Arabidopsis thaliana>gb:F3D13_1678222 Arabidopsis thaliana BAC F3D13.
pir|D85018|D85018161101e-23175-60963-207+1227probable hypoersensitive response protein [imported] - Arabidopsis thaliana>gb:ATCHRIV3_1544827 Arabidopsis thaliana DNA
pir|D84775|D8477517798e-14175-59160-199+1227hypothetical protein At2g35980 [imported] - Arabidopsis thaliana>gb:AB047812_1520672 Arabidopsis thaliana YLS9 mRNA for
gb:AB091429_152504218764e-13175-61264-210+1229Nicotiana tabacum mRNA for hin1, complete cds.>gb:AF212183_1777426 Nicotiana tabacum harpin inducing protein (hin1) gene
pir|T03265|T0326519764e-13175-61256-202+1221hin1 protein - common tobacco>gb:NTHIN1_1691580 N.tabacum mRNA for hin1 gene.
gb:AB162221_152862220765e-13175-60664-208+1228Capsicum chinense HIN1-Cc mRNA for hin1 like protein, complete cds.
gb:AB127581_152833721742e-12175-60664-208+1229Nicotiana tabacum hin9 mRNA for harpin inducing protein 9, complete cds.
gb:AB127582_152833822733e-12175-60664-208+1229Nicotiana tabacum hin18 mRNA for harpin inducing protein 18, complete cds.
gb:AB005243_150953423711e-11175-59148-185+1207Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRN17.
gb:AY155669_158538424695e-11175-60662-206+1225Solanum tuberosum hin1-like protein mRNA, complete cds.
gb:AY485992_160853825681e-10175-45064-155+1187Solanum tuberosum hin1-like protein mRNA, partial cds.
gb:AP005873_185942626657e-10175-61852-187+1214Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05.>gb:AP006851_1863108 Oryza sativa (
pir|D96587|D9658727633e-09181-59178-213+1239hypothetical protein F20D21.35 [imported] - Arabidopsis thaliana>gb:AE005173_893352 Arabidopsis thaliana chromosome 1, b
gb:AP005314_185044428634e-09175-59143-185+1218Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01.>gb:AP005567_1854166 Oryza sativa (
gb:AF370332_179221529621e-08175-60659-203+1223Arabidopsis thaliana putative harpin-induced protein (At5g06320) mRNA, partial cds.
gb:AB006700_150990130621e-08175-60667-211+1231Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHF15.>gb:BT000871_1635126 Arabidopsis thaliana clone C104930 p
gb:AY086125_157118231604e-08175-60388-230+1252Arabidopsis thaliana clone 21639 mRNA, complete sequence.
gb:AE005173_89422032595e-08175-60388-238+1260Arabidopsis thaliana chromosome 1, bottom arm complete sequence.>gb:AC007234_1535634 Genomic sequence for Arabidopsis th
gb:AP004674_184316633581e-07175-59140-177+1200Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05.
gb:AF264698_178187134581e-07175-54974-194+1240Arabidopsis thaliana NDR1/HIN1-Like protein 2 (NHL2) mRNA, complete cds.
gb:OSJN00083_169458735573e-07175-40892-169+1255Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence.
gb:AY448010S6_160659536573e-07175-55241-165+1181Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig SR6.
gb:OSJN00092_169476837565e-07175-60645-187+1205Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence.
gb:ATAC009918_154309638565e-07175-54974-194+1240Arabidopsis thaliana chromosome III BAC T19F11 genomic sequence, complete sequence.
gb:AF083702_176693339557e-07175-60667-210+1230Arabidopsis thaliana clone sps228 unknown mRNA.>gb:AF264699_1781872 Arabidopsis thaliana NDR1/HIN1-like protein 3 (NHL3)
pir|T02662|T0266240559e-07175-60645-187+1205hin1 protein homolog - rice>gb:AF039532_1763374 Oryza sativa harpin induced gene 1 homolog (Hin1) mRNA, complete cds.
gb:AB016877_151299641551e-06175-59184-230+1256Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MLF18.
pir|F85065|F8506542512e-05175-59165-202+1226hypothetical protein AT4g05220 [imported] - Arabidopsis thaliana>gb:ATCHRIV15_1544366 Arabidopsis thaliana DNA chromosom
gb:AB083029_152414243504e-05175-60936-185+1203Glycine max mRNA for syringolide-induced protein B13-1-9, complete cds.
pir|H84768|H8476844497e-05175-60673-217+1238hypothetical protein At2g35460 [imported] - Arabidopsis thaliana>gb:AC005314_1532573 Arabidopsis thaliana chromosome 2 c
pir|E84668|E8466845481e-04175-59197-235+1260hypothetical protein At2g27080 [imported] - Arabidopsis thaliana>gb:AC005623_1532856 Arabidopsis thaliana chromosome 2 c
gb:AP004637_184239546481e-04118-59159-216+1242Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0703C03.>gb:AP005493_1852820 Oryza sativa (
gb:AC136520_174324847473e-04175-59187-225+1291Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence.
gb:AP003413_182909748466e-04175-600102-239+1291Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1151A10.
gb:AP004139_183816349450.001175-60937-182+1197Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07.>gb:AP005108_1847988 Oryza sativa
gb:AC136519_174324050450.001175-59187-227+1293Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007C23, complete sequence.
gb:AY577290_161597451450.001175-59171-208+1234Petunia integrifolia subsp. inflata clone Pi071603a unknown pollen protein mRNA, complete cds.
gb:AP005066_184747752440.002175-59174-225+1250Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05.>gb:AP005841_1858887 Oryza sativa (
gb:BT002004_163560753430.004118-58514-171+1219Arabidopsis thaliana non-race specific disease resistance protein (NDR1) (At3g20600) mRNA, complete cds.>gb:BT006267_163
gb:AY735684_162572654430.004175-591118-256+1281Arabidopsis thaliana hypothetical protein AT5G21130 mRNA, complete cds.>gb:AC140977_1744077 Arabidopsis thaliana chromos
gb:AP005829_185862555430.005118-59127-184+1210Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1008E06.
pir|D96643|D9664356430.005175-61263-205+1224hypothetical protein T13M11.12 [imported] - Arabidopsis thaliana>gb:AE005173_893846 Arabidopsis thaliana chromosome 1, b
gb:AP003270_182685157420.006175-59460-202+1224Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12.>gb:AP003611_1831349 Oryza sativa (
gb:AY059166_156452958420.006184-42066-151+1231Arabidopsis thaliana At2g01080/F23H14.5 mRNA, complete cds.>gb:AF378858_1793443 Arabidopsis thaliana At2g01080/F23H14.5
gb:AC006837_153462559420.006184-42066-151+1231Arabidopsis thaliana chromosome 2 BAC F23H14 genomic sequence, complete sequence.
gb:AB020744_151459060420.006175-59139-176+1198Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9E15.>gb:AY800650_1628598 Arabidopsis thaliana clone H0000001
pir|D84420|D8442061420.006184-42066-151+1220hypothetical protein At2g01080 [imported] - Arabidopsis thaliana
gb:AY775036_118001162420.008277-5915-109+1134Nicotiana tabacum Avr9/Cf-9 rapidly elicited protein 76 (ACRE76) mRNA, partial cds.
pir|T08453|T0845363420.008175-333128-179+1300hypothetical protein F22O6.160 - Arabidopsis thaliana>gb:ATF22O6_1549703 Arabidopsis thaliana DNA chromosome 3, BAC clon
gb:AF325013_178646764410.018175-59185-229+1265Arabidopsis thaliana At1g17620 (At1g17620/F11A6_23) mRNA, complete cds.
gb:AC022492_153906165410.018175-59184-228+1264Genomic sequence for Arabidopsis thaliana BAC F1L3 from chromosome I, complete sequence.>gb:AY052685_1562845 Arabidopsis
gb:AP000410_182002466400.024115-41413-120+1255Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K10D20.
gb:AB026295_151694867380.12175-603153-302+1322Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10.
pir|H84670|H8467068380.12175-61578-213+1231hypothetical protein At2g27270 [imported] - Arabidopsis thaliana>gb:AC006233_1533784 Arabidopsis thaliana chromosome 2 c
gb:AP005605_185474769370.20181-591151-286+1311Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1449_C01.>gb:AP005847_1859015 Oryza sativa
gb:AC092557_173547670370.20175-61540-189+1212Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence.
gb:AC084110_173334771370.20205-4119-76+1416Arabidopsis thaliana chromosome 1 BAC F27G20 genomic sequence, complete sequence.
pir|C86447|C8644772370.20205-4119-76+1448F5D14.3 protein - Arabidopsis thaliana>gb:AE005172_892064 Arabidopsis thaliana chromosome 1, top arm complete sequence.>
gb:AB020746_151462973370.26238-603159-281+1298Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MOB24.
gb:AY085665_157073374360.58175-36674-141+1235Arabidopsis thaliana clone 1678 mRNA, complete sequence.
pir|T47579|T4757975360.58175-36674-141+1235hypothetical protein F24B22.160 - Arabidopsis thaliana>gb:ATF24B22_1549829 Arabidopsis thaliana DNA chromosome 3, BAC cl
gb:BT012175_164138276342.2184-41465-141+1219Arabidopsis thaliana At4g26490 gene, complete cds.
pir|T05055|T0505577342.2184-41446-122+1200hypothetical protein M3E9.80 - Arabidopsis thaliana>gb:ATCHRIV65_1546530 Arabidopsis thaliana DNA chromosome 4, contig f
gb:AP002537_182250378332.9175-38782-149+1288Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0001B06.>gb:AP003417_1829191 Oryza sativa (
pir|H69086|H6908679332.9412-60090-166-1561ABC transporter - Methanobacterium thermoautotrophicum (strain Delta H)>gb:AE000923_29314 Methanobacterium thermoautotr
pir|S24213|S2421380332.9301-51645-118+1308reaction center protein chain M - Rhodobacter sphaeroides>gb:RSPUFM_168221 R.sphaeroides Y pufM gene for polypeptide M o
pir|T50761|T5076181332.9301-51645-118+1308reaction center protein chain M [imported] - Rhodobacter sphaeroides>gb:AF195122_487209 Rhodobacter sphaeroides photosyn
pir|A03456|WNRFMS82332.9301-51645-118+1308reaction center protein chain M - Rhodobacter sphaeroides>gb:RCARCM_162566 R.sphaeroides reaction center protein m subun
sp|P02953|RCEM_RHOSH83332.9301-51644-117+1307Reaction center protein M chain (Photosynthetic reaction center M subunit).
gb:SME591791_18656884333.8355-59793-173-1364Sinorhizobium meliloti 1021 complete chromosome; segment 10/12.
gb:AP003247_182620985334.9175-420134-226+1312Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02.>gb:AP003570_1831012 Oryza sativa (
gb:AK048638_116845286334.9442-582233-282-1973Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130091B14 product:protocadherin 8, ful
gb:AB062783_869087334.9301-51645-118+1292Rhodobacter azotoformans pufL, pufM genes for photoreaction center L subunit, photoreaction center M subunit, partial cd
gb:XLA318531_258255488326.4414-53089-127-2543Xenopus laevis mRNA for papillary renal cell carcinoma protein (prcc gene).
gb:BC036025_198180289326.4412-582233-293-11070Homo sapiens protocadherin 8, transcript variant 1, mRNA (cDNA clone MGC:33061 IMAGE:5278690), complete cds.
gb:AY013873_193429290326.4412-582233-293-1973Homo sapiens protocadherin ARCADLIN (PCDH8) mRNA, complete cds, alternatively spliced.
gb:AL139085_192022991326.4412-582233-293-1973Human DNA sequence from clone RP11-431O22 on chromosome 13 Contains the 5' end of the gene for chondromodulin I precurso
gb:AP003545_183069792326.4343-6064-91-1132Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0613F06.
gb:AF360140_179109693326.4400-56792-147+1408Arabidopsis thaliana putative pectate lyase (At4g24780) mRNA, complete cds.
gb:ATU83621_155733194326.4400-56720-75+1226Arabidopsis thaliana putative pectate lyase (A10) gene, partial cds.
pir|T05556|T0555695326.4400-56790-145+1404pectate lyase (EC 4.2.2.2) F22K18.20 - Arabidopsis thaliana>gb:ATCHRIV62_1546361 Arabidopsis thaliana DNA chromosome 4,
sp|Q9C5M8|PL18_ARATH96326.4400-56792-147+1408Probable pectate lyase 18 precursor (EC 4.2.2.2) (Pectate lyase A10).>gb:BT020489_1642883 Arabidopsis thaliana At4g24780
sp|O95206|PCH8_HUMAN97326.4412-582233-293-11070Protocadherin 8 precursor (Arcadlin).>gb:AF061573_1879901 Homo sapiens protocadherin (PCDH8) mRNA, complete cds.>gb:AL13
gb:BC053008_210138098328.4442-582233-282-11070Mus musculus protocadherin 8, mRNA (cDNA clone MGC:62192 IMAGE:5698009), complete cds.
gb:AF231125_206004399328.4442-582234-283-11071Mus musculus paraxial protocadherin (Papc) mRNA, complete cds.
gb:AB026154_2044404100328.4442-582233-282-1972Rattus norvegicus mRNA for arcadlin, complete cds.
gb:AP004728_1843870101328.4346-57353-127-1147Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0583E12.
gb:BX572099_798705102328.4207-368121-176-2613Prochlorococcus marinus MIT9313 complete genome; segment 5/7.
gb:REU80928_163422103328.4409-522243-280-1823Rhizobium etli strain CFN42 symbiotic plasmid p42d, complete sequence.
pir|A95938|A95938104328.4364-600298-387-1415probable glycosyltransferase protein redB [imported] - Sinorhizobium meliloti (strain 1021) magaplasmid pSymB>gb:RME5919