Clone JMFS044F07 [sequences]

previous contigF:003392 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AB025604_15162531481e-04406-54079-124+1225Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F2O15.>gb:BT004606_1637640 Arabidopsis thaliana At5g59380 gene
gb:AY086606_15716532458e-04391-54028-78+1182Arabidopsis thaliana clone 261609 mRNA, complete sequence.
pir|T45595|T455953458e-04391-54028-78+1182hypothetical protein F12A12.100 - Arabidopsis thaliana>gb:ATF12A12_1548299 Arabidopsis thaliana DNA chromosome 3, BAC cl
gb:AY888006_25476494450.001412-54912-57+1257Gallus gallus methyl-CpG-binding domain protein 2 (MBD2) mRNA, complete cds.
gb:AF072245_20533585450.001412-549158-203+1249Mus musculus testis specific methyl-CpG binding protein MBD2 (Mbd2) mRNA, complete cds.>gb:MM2MBD1_2113737 Mus musculus
gb:AF072243_20533566450.001412-549158-203+1414Mus musculus methyl-CpG binding protein MBD2 (Mbd2) mRNA, complete cds.>gb:BC046607_2099310 Mus musculus methyl-CpG bind
gb:HSMETHYL2_20187147440.003412-546155-199+1302Homo sapiens methyl-CpG binding protein 2 (MBD2) gene, exon 2 and alternatively spliced testis-specific methyl-CpG bindi
gb:AF072242_18808538440.003412-546155-199+1411Homo sapiens methyl-CpG binding protein MBD2 (MBD2) mRNA, complete cds.>gb:BC032638_1980587 Homo sapiens methyl-CpG bind
gb:AB084168_24637109430.004412-56411-61+1283Xenopus laevis mRNA for methyl-CpG binding protein MBD3, complete cds.
gb:AY238336_252138710430.005412-54611-55+1256Danio rerio methyl-CpG binding protein 2 (mbd2) mRNA, complete cds.
gb:BC071531_255626711410.014412-54911-56+1273Danio rerio methyl-CpG binding domain protein 3a, mRNA (cDNA clone MGC:86913 IMAGE:6905673), complete cds.
gb:AY398379_253190912410.014412-54911-56+1273Danio rerio clone RK121A1A12 methyl-CpG binding domain protein 3 (MBD3) mRNA, complete cds.
gb:AB061672_246290613410.019412-56411-61+1267Xenopus laevis mRNA for methyl-CpG binding protein MBD2, complete cds.
gb:AY050816_156232014400.04146-2409-74+1548Arabidopsis thaliana unknown protein (At1g63240) mRNA, complete cds.>gb:AY114080_1578491 Arabidopsis thaliana unknown pr
gb:AF170346_247829115390.054421-56413-60+1282Xenopus laevis methyl-CpG binding protein MBD3 (MBD3) mRNA, complete cds.
gb:AF072246_188085416390.054418-5461-43+1146Homo sapiens testis specific methyl-CpG binding protein MBD2 (MBD2) mRNA, partial cds.
gb:OSJN00167_169606617390.054379-55863-121+1377Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0040D17, complete sequence.
gb:AF072248_205335918390.070412-56411-61+1285Mus musculus methyl-CpG binding domain-containing protein MBD3 (Mbd3) mRNA, complete cds.>gb:AF120995_2055352 Mus muscul
gb:AC005943_187506019390.070412-56411-61+1291Homo sapiens chromosome 19, cosmid R30538, complete sequence.>gb:AF072247_1880855 Homo sapiens methyl-CpG binding domain
gb:OSJN00120_169523220390.070379-55886-144+1418Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033G08, complete sequence.
gb:AY238339_131218821390.092412-54011-53+1326Branchiostoma floridae methyl-CpG binding protein 2/3 (Mbd2/3) mRNA, complete cds.
gb:OSJN00209_169673822380.16406-549123-169+1385Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09, complete sequence.
gb:OSJN00120_169523823370.20388-55889-144+1336Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033G08, complete sequence.>gb:OSJN00167_1696059 Oryza sativa g
gb:OSJN00253_169743624370.35409-570105-157+1505Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08, complete sequence.
gb:BC043835_254829125360.60406-5497-56+1321Xenopus laevis methyl-CpG binding domain protein 1, mRNA (cDNA clone MGC:53260 IMAGE:5569883), complete cds.
sp|Q09685|YA12_SCHPO26360.6067-2163-49+1411Hypothetical protein C13C5.02 in chromosome I.>pir|S58094|S58094 hypothetical WW domain protein SPAC13C5.02 - fission ye
gb:AY298900_252576727350.78412-564109-159+1524Danio rerio methyl-cytosine binding protein 2 (mecp2) mRNA, complete cds.
gb:AF051768_247074728351.0412-561101-150+1467Xenopus laevis methyl-CpG-binding protein 2 mRNA, complete cds.>gb:AF106951_2473965 Xenopus laevis methyl-CpG-binding pr
gb:AB015475_151257029351.0379-546170-224+1306Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMN10.>gb:BT014975_1641945 Arabidopsis thaliana At5g59800 gene,
gb:AE014297_113918130351.0406-546364-409+11081Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003695_1221174 Drosophila melanogaster chromosome 3R, sec
gb:AE014297_113918031351.0406-546452-497+11169Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003695_1221173 Drosophila melanogaster chromosome 3R, sec
gb:GGARBP_257292732351.3412-561101-150+1344Gallus gallus mRNA for attachment region binding protein (ARBP).
gb:HSRNACPGB_202003533351.3412-56190-139+1476H.sapiens mRNA for methyl CpG binding protein 2.
gb:HSMECP2X_201869834351.3412-561100-149+1486H.sapiens mRNA for methyl-CpG-binding protein 2.
gb:HSMECP2_201869735351.3412-56191-140+1477H.sapiens MeCP-2 gene.
gb:HSM806231_201824536351.3412-561130-179+1516Homo sapiens mRNA; cDNA DKFZp686A24160 (from clone DKFZp686A24160).
gb:AY541280_195633337351.3412-561112-161+1498Homo sapiens methyl CpG binding protein 2 isoform B (MECP2) mRNA, complete cds.
gb:AF295597_189548438351.3412-561100-149+1486Macaca fascicularis methyl-CpG-binding protein 2 (MECP2) mRNA, complete cds.
gb:AY080662_156839439351.3409-558244-293+1425Arabidopsis thaliana unknown protein (At1g22310) mRNA, complete cds.>gb:AY133726_1581546 Arabidopsis thaliana clone U198
gb:AX886192_148164540351.3412-561112-161+1219Sequence 2055 from Patent EP1033401.
pir|A86356|A8635641351.3409-558343-392+1524hypothetical protein [imported] - Arabidopsis thaliana>gb:AE005172_891186 Arabidopsis thaliana chromosome 1, top arm com
pir|S57963|S5796342351.3412-56190-139+1476methyl CpG binding protein 2 - human (fragment)
sp|Q00566|MEC2_RAT43351.3412-561100-149+1492Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2).>pir|A41907|A41907 methyl-CpG-binding protein 2 - rat>gb:RATMECP2A
sp|Q9Z2D6|MEC2_MOUSE44351.3412-561100-149+1484Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2).>gb:AF072251_2053361 Mus musculus methyl-CpG binding protein 2 (Me
sp|P51608|MEC2_HUMAN45351.3412-561100-149+1486Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2).>gb:AF030876_1877681 Homo sapiens chromosome X clone Qc-8D3, RP4-6
gb:AF412121_249268346341.764-216182-229+1965Gallus gallus late domain-interacting protein 1 mRNA, partial cds.
gb:BC082281_210834847341.764-216195-242+1875Mus musculus neural precursor cell expressed, developmentally down-regulated gene 4-like, mRNA (cDNA clone IMAGE:5401533
gb:BC039746_209842048341.764-21671-118+1855Mus musculus neural precursor cell expressed, developmentally down-regulated gene 4-like, mRNA (cDNA clone MGC:49433 IMA
gb:AK122283_206894849341.764-216170-217+1442Mus musculus mRNA for mKIAA0439 protein.
gb:AF277232_206126550341.764-21671-118+1855Mus musculus ubiquitin-protein ligase Nedd4-2 mRNA, complete cds.
gb:AK042621_116635351341.764-21671-118+1835Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730011F13 product:neural precurs
gb:BC080900_256181552342.3412-55819-67+1640Xenopus tropicalis MBD1 protein, mRNA (cDNA clone IMAGE:6977305), partial cds.
gb:HSM802187_201742953342.364-216141-188+1820Homo sapiens mRNA; cDNA DKFZp434P2422 (from clone DKFZp434P2422); partial cds.
gb:BC032597_198056354342.364-216192-239+1911Homo sapiens neural precursor cell expressed, developmentally down-regulated 4-like, mRNA (cDNA clone MGC:44873 IMAGE:55
gb:BC000621_196688755342.364-21692-139+1855Homo sapiens neural precursor cell expressed, developmentally down-regulated 4-like, mRNA (cDNA clone IMAGE:3346045), pa
gb:AY751751_196170756342.364-21626-73+1256Homo sapiens NEDD4-2 minus WW2,3 variant (NEDD4L) mRNA, partial cds, alternatively spliced.
gb:AY312514_194325457342.364-216192-239+1975Homo sapiens NEDD4.2 mRNA, complete cds.
gb:AY112985_193647958342.364-216184-231+1947Homo sapiens ubiquitin ligase NEDD4h (NEDD4L) mRNA, complete cds; alternatively spliced.
gb:AY112984_193647859342.364-216184-231+1967Homo sapiens ubiquitin ligase NEDD4g (NEDD4L) mRNA, complete cds; alternatively spliced.
gb:AF210730_189017160342.364-21671-118+1854Homo sapiens NEDD4La (NEDD4La) mRNA, complete cds.>gb:AF385931_1900073 Homo sapiens ubiquitin ligase NEDD4Lb (NEDD4L) mR
gb:AB071179_187120161342.364-216192-239+1955Homo sapiens NEDL3 mRNA for NEDD4-like ubiquitin ligase 3, complete cds.
gb:AB007899_186402562342.364-216232-279+1995Homo sapiens KIAA0439 mRNA, partial cds.
gb:CR858697_118285363342.364-216196-243+1959Pongo pygmaeus mRNA; cDNA DKFZp459F237 (from clone DKFZp459F237).
pir|T46412|T4641264342.364-216141-188+1820ubiquitin-protein ligase (EC 6.3.2.19) NEDD4 - human (fragment)
gb:AB097677_1271265333.9194-514222-333+2623Staphylococcus aureus DNA, typeIVd cassette chromosome mec, partial sequence.
gb:XLAJ85_258266866335.070-207191-233+1971Xenopus laevis mRNA for Nedd4 protein.
gb:BC074133_255765167335.070-207191-233+1971Xenopus laevis Nedd4 protein, mRNA (cDNA clone MGC:81849 IMAGE:7008311), complete cds.
gb:BC069837_210612868335.0412-54911-56+1588Mus musculus methyl-CpG binding domain protein 1, mRNA (cDNA clone MGC:76676 IMAGE:30435760), complete cds.
gb:AF072240_205335569335.0412-54911-56+1636Mus musculus methyl-CpG binding protein MBD1 (Mbd1) mRNA, complete cds.>gb:AF120978_2055351 Mus musculus domesticus meth
gb:AE017341_175389170335.055-16855-90+1847Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence.
gb:AK004624_115246471335.0412-54911-56+1588Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200007A08 product:methyl-CpG binding domai
gb:BC075469_255857272326.670-207191-233+1970Xenopus tropicalis neural precursor cell expressed, developmentally down-regulated 4-like, mRNA (cDNA clone MGC:89277 IM
gb:AB084169_246371173326.6412-56411-80+1302Xenopus laevis mRNA for methyl-CpG binding protein MBD3 long form, complete cds.>gb:BC077740_2560396 Xenopus laevis meth
gb:BC024812_209473374326.6412-54073-115+1554Mus musculus methyl-CpG binding domain protein 4, mRNA (cDNA clone MGC:36060 IMAGE:5356016), complete cds.
gb:AF072249_205336075326.6412-54073-115+1554Mus musculus methyl-CpG binding protein MBD4 (Mbd4) mRNA, complete cds.>gb:AF120996_2055353 Mus musculus domesticus meth
gb:AF527618_180840876326.6415-54632-74+1400Zea mays methyl binding domain protein MBD109 (mbd109) mRNA, complete cds.
gb:AB084782_1086977326.688-234149-192+1738Paenibacillus koleovorans dssA gene for sheath polysaccharide-degrading enzyme, complete cds.
gb:AF170347_247829278328.6412-56411-81+1303Xenopus laevis methyl-CpG binding protein MBD3 long form (MBD3) mRNA, complete cds.
gb:BC081932_210817479328.6412-54911-56+1533Rattus norvegicus methyl-CpG binding domain protein 1 (predicted), mRNA (cDNA clone MGC:93958 IMAGE:7114194), complete c
gb:BC011752_197318480328.6412-54386-129+1574Homo sapiens methyl-CpG binding domain protein 4, mRNA (cDNA clone MGC:19710 IMAGE:3534047), complete cds.>gb:CR450305_1
gb:AF532602_190617281328.6412-54386-129+1540Homo sapiens methyl-CpG binding domain protein 4 variant mRNA, complete cds; alternatively spliced.
gb:AF072250_188085682328.6412-54386-129+1580Homo sapiens methyl-CpG binding protein MBD4 (MBD4) mRNA, complete cds.>gb:AF114784_1884472 Homo sapiens methyl-CpG bind
gb:AE016817_174715183328.6379-501305-345+1623Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence.
gb:CR857219_118146684328.6412-54386-129+1573Pongo pygmaeus mRNA; cDNA DKFZp469B1421 (from clone DKFZp469B1421).
pir|S59074|S5907485328.6130-22816-48-251protochlorophyllide reductase (EC 1.3.1.33) - Phormidium foveolarum (fragment)
pir|AI2023|AI202386328.697-228193-234-2329protochlorophyllide oxido-reductase [imported] - Nostoc sp. (strain PCC 7120)>gb:BA000019_682732 Nostoc sp. PCC 7120 DN