Clone JMFS043H04 [sequences]

previous contigF:003290 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AB112672_152719011263e-28421-62724-92+11107Cucumis sativus CsARF2 mRNA for auxin response factor 2, complete cds.
gb:AP003726_183251721189e-26427-62746-112+1991Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H10.>gb:AP004324_1840157 Oryza sativa (
gb:AB071296_152275431189e-26427-6278-74+11123Oryza sativa OsARF7a mRNA for auxin response factor 7a, partial cds.
gb:AP004093_183759741141e-24421-62724-92+1908Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1661_C12.>gb:AP004863_1846164 Oryza sativa
gb:AP003728_183256151141e-24421-62724-92+1917Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08.>gb:AP004989_1846778 Oryza sativa (
gb:AB071294_152275261141e-24421-6273-71+1396Oryza sativa OsARF6a mRNA for auxin response factor 6a, partial cds.
gb:AP005294_185003871125e-24427-62737-103+11139Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1679_B08.
gb:AB071295_152275381125e-24421-6273-71+1880Oryza sativa OsARF6b mRNA for auxin response factor 6b, partial cds.
gb:OSJN00095_169482191127e-24421-62725-93+1818Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17, complete sequence.
gb:AB071298_1522756101127e-24421-6272-70+1795Oryza sativa OsARF8 mRNA for auxin response factor 8, partial cds.
gb:AB112671_1527189111111e-23421-62717-84+11081Cucumis sativus CsARF1 mRNA for auxin response factor 1, complete cds.
gb:AB024026_1515710121101e-23421-62716-84+1821Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15O15.
sp|Q9FGV1|ARFH_ARATH131101e-23421-62716-84+1811Auxin response factor 8.>gb:AY669790_1620755 Arabidopsis thaliana clone C105345 ARF8 (At5g37020) mRNA, complete cds.>gb:
gb:AP004622_1842250141103e-23430-62422-86+11113Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12.>gb:AP005509_1853084 Oryza sativa (
gb:AB071297_1522755151103e-23430-6245-69+11096Oryza sativa OsARF7b mRNA for auxin response factor 7b, partial cds.
gb:AY669788_1620753161086e-23421-62719-87+1935Arabidopsis thaliana clone C105343 ARF6 (At1g30330) mRNA, complete cds.
sp|Q9ZTX8|ARFF_ARATH171086e-23421-62717-85+1933Auxin response factor 6.>pir|F86427|F86427 auxin response factor 6 (ARF6) [imported] - Arabidopsis thaliana>gb:AE005172_
gb:AB112673_1527191181081e-22421-62717-85+1916Cucumis sativus CsARF3 mRNA for auxin response factor 3, complete cds.
pir|G86325|G86325191081e-22421-62717-84+11062hypothetical protein T29M8.9 - Arabidopsis thaliana>gb:AE005172_890883 Arabidopsis thaliana chromosome 1, top arm comple
sp|Q8RYC8|ARFS_ARATH201081e-22421-62717-84+11086Auxin response factor 19 (Auxin-responsive protein IAA22).>gb:ATU53672_1557081 Arabidopsis thaliana early auxin-induced
gb:AF186466_1775147211064e-22421-62718-85+11165Arabidopsis thaliana non-phototropic hypocotyl 4 (NPH4) gene, complete cds.
gb:AF042195_1763624221064e-22421-62718-85+11164Arabidopsis thaliana auxin response factor 7 (ARF7) mRNA, complete cds.
gb:AF022368_1761985231064e-22421-62718-85+11165Arabidopsis thaliana BIPOSTO (BIP) mRNA, complete cds.
sp|P93022|ARFG_ARATH241064e-22421-62718-85+11164Auxin response factor 7 (Non-phototropic hypocotyl 4) (BIPOSTO protein) (Auxin-responsive protein IAA21/IAA23/IAA25).>gb
gb:OSJN00127_1695343251041e-21421-62733-101+1954Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01, complete sequence.
gb:AB071292_1522750261041e-21421-62733-101+1955Oryza sativa OsMP mRNA for Arabidopsis Monopteros-like protein, complete cds.
gb:AF467900_1802448271019e-21421-62740-108+1954Prunus persica clone pPn31C7 hypothetical proteins, and hypothetical transcription factor genes, complete cds.
gb:U79557_1726470281003e-20421-62736-104+1890Arabidopsis thaliana IAA24 (IAA24) mRNA, partial cds.
pir|T51807|T51807291003e-20421-62748-116+1902transcription factor monopteros [validated] - Arabidopsis thaliana>gb:AF037229_1763130 Arabidopsis thaliana transcriptio
pir|G86331|G86331301003e-20421-62737-105+1850IAA24 [imported] - Arabidopsis thaliana>gb:AE005172_890947 Arabidopsis thaliana chromosome 1, top arm complete sequence.
sp|P93024|ARFE_ARATH311003e-20421-62748-116+1902Auxin response factor 5 (Transcription factor MONOPTEROS) (Auxin- responsive protein IAA24).>gb:BT002050_1635653 Arabido
gb:AY133723_158154332734e-12439-61822-80+1662Arabidopsis thaliana auxin response factor 1 (At1g59750) mRNA, complete cds.
sp|Q8L7G0|ARFA_ARATH33734e-12439-61822-80+1665Auxin response factor 1.>pir|D96621|D96621 auxin response factor 1 [imported] - Arabidopsis thaliana>gb:AE005173_893658
gb:AP004332_184035034711e-11439-62424-84+1808Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16.
gb:OSJN00292_169807235711e-11439-62420-80+11673Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete sequence.
gb:OSJN00175_169621136711e-11439-62420-80+1669Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20, complete sequence.
gb:AB071293_152275137711e-11439-6247-67+1791Oryza sativa OsARF2 mRNA for auxin response factor 2, partial cds.
gb:AP005808_185821538704e-11439-62426-86+1678Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0038F20.
gb:BT001072_163532739698e-11439-62461-121+1678Arabidopsis thaliana At5g62000/mtg10_20 mRNA, complete cds.>gb:AF378862_1793447 Arabidopsis thaliana AT5g62000/mtg10_20
sp|Q94JM3|ARFB_ARATH40698e-11439-62461-121+1859Auxin response factor 2 (ARF1-binding protein) (ARF1-BP).>gb:AB016880_1513032 Arabidopsis thaliana genomic DNA, chromoso
gb:AY300808_159730941681e-10439-62437-97+1326Mangifera indica auxin response factor-like protein (ARF2) mRNA, complete cds.
gb:AY255705_159312642681e-10439-62437-97+1840Mangifera indica auxin response factor-like protein (ARF1) mRNA, complete cds.
gb:AJ716227_181376743681e-10439-62456-116+1848Brassica napus mRNA for putative auxin response factor (ARF2 gene).
pir|A84904|A8490444681e-10439-62442-103+1622hypothetical protein At2g46530 [imported] - Arabidopsis thaliana>gb:AC006418_1534128 Arabidopsis thaliana chromosome 2 c
sp|Q9ZPY6|ARFK_ARATH45681e-10439-62421-82+1601Auxin response factor 11.
gb:OSA306306_169245446642e-09439-62424-84+1836Oryza sativa subsp. japonica mRNA for auxin response factor 1 (arf1 gene).
pir|T47975|T4797547628e-09439-62425-86+1613auxin response factor-like protein - Arabidopsis thaliana>gb:ATF15G16_1548709 Arabidopsis thaliana DNA chromosome 3, BAC
sp|Q9C5W9|ARFR_ARATH48628e-09439-62425-86+1602Auxin response factor 18.>gb:AY059746_1564603 Arabidopsis thaliana auxin response factor ARF18 (At3g61830) mRNA, complet
gb:AF140228_177152949621e-08439-62440-100+1857Oryza sativa (indica cultivar-group) putative auxin response factor 1 mRNA, partial cds.
gb:ATAC002343_154278450604e-08439-62447-108+1497Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence.
sp|Q9XED8|ARFI_ARATH51604e-08439-62412-73+1638Auxin response factor 9.>pir|T08917|T08917 auxin response factor 9 - Arabidopsis thaliana>gb:ATCHRIV60_1546281 Arabidops
sp|Q9LP07|ARFW_ARATH52572e-07421-60321-80+1222Putative auxin response factor 23.
sp|Q9ZTX9|ARFD_ARATH53572e-07364-62440-124+1788Auxin response factor 4.>gb:AB011483_1511498 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUF9.>gb:AY080832_
pir|E96503|E9650354573e-07439-6034-57+1330protein F9C16.11 [imported] - Arabidopsis thaliana>gb:AE005173_892589 Arabidopsis thaliana chromosome 1, bottom arm comp
gb:ATU89296_155736955557e-07439-62754-108+1608Arabidopsis thaliana auxin response transcription factor 3 (ARF3) mRNA, complete cds.
pir|T03278|T0327856557e-07439-62754-108+1608gene ETTIN protein - Arabidopsis thaliana>gb:AF007788_1760933 Arabidopsis thaliana ETTIN gene, complete cds.
sp|O23661|ARFC_ARATH57557e-07439-62754-108+1608Auxin response factor 3 (ETTIN protein).>pir|E84750|E84750 hypothetical protein At2g33860 [imported] - Arabidopsis thali
gb:AB112675_152719358551e-06439-54054-87+1733Cucumis sativus CsARF5 mRNA for auxin response factor 5, complete cds.
sp|Q9XID4|ARFL_ARATH59543e-06421-60321-80+1593Putative auxin response factor 12.>gb:AY669792_1620757 Arabidopsis thaliana clone C105347 ARF12 (At1g34310) mRNA, comple
gb:AB071291_152274960535e-06439-62739-95+1718Oryza sativa OsETTIN2 mRNA for Arabidopsis ETTIN-like protein 2, complete cds.
sp|Q9LQE8|ARFN_ARATH61535e-06421-60321-80+1605Putative auxin response factor 14.
gb:AC023913_153925262526e-06421-60333-92+1620Arabidopsis thaliana chromosome 1 BAC F7P12 genomic sequence, complete sequence.
sp|Q9C8N9|ARFU_ARATH63526e-06421-60321-80+1606Putative auxin response factor 21.
gb:AY669795_162076064528e-06421-60321-80+1590Arabidopsis thaliana clone C00610 ARF20 (At1g35240) mRNA, complete cds.
pir|D86473|D8647365528e-06421-60321-80+161569.8K hypothetical protein - Arabidopsis thaliana>gb:AE005172_892290 Arabidopsis thaliana chromosome 1, top arm complete
sp|Q9C7I9|ARFT_ARATH66528e-06421-60321-80+1606Putative auxin response factor 20.
gb:AF099735_176807867521e-05421-6184-62+1701Arabidopsis thaliana auxin response factor 10 (ARF10) mRNA, partial cds.
gb:AY680406_162208168521e-05439-60325-78+1479Arabidopsis thaliana ARF13 (At1g34170) mRNA, complete cds.
gb:AY669793_162075869521e-05439-60325-78+1505Arabidopsis thaliana clone C105348 (B) ARF13 (At1g34170) mRNA, complete cds.
gb:AE005172_89231870521e-05421-60321-80+1570Arabidopsis thaliana chromosome 1, top arm complete sequence.>gb:AC007887_1536320 Genomic sequence for Arabidopsis thali
pir|H86465|H8646571521e-05439-60321-74+1479F12G12.1 protein - Arabidopsis thaliana>gb:AE005172_892220 Arabidopsis thaliana chromosome 1, top arm complete sequence.
sp|Q9LQE3|ARFO_ARATH72521e-05421-60321-80+1593Putative auxin response factor 15.
sp|Q9FX25|ARFM_ARATH73521e-05439-60327-80+1623Putative auxin response factor 13.
sp|Q9SKN5|ARFJ_ARATH74521e-05421-6184-62+1693Auxin response factor 10.>pir|G84683|G84683 hypothetical protein At2g28350 [imported] - Arabidopsis thaliana>gb:AC006283
pir|C86468|C8646875511e-05421-60321-80+1600probable auxin response factor, 53188-50111 [imported] - Arabidopsis thaliana>gb:AE005172_892239 Arabidopsis thaliana ch
sp|Q9C8N7|ARFV_ARATH76511e-05421-60321-80+1598Putative auxin response factor 22.>gb:AY669796_1620761 Arabidopsis thaliana clone C105354 ARF22 (At1g34390) mRNA, comple
gb:OSJN00156_169581877503e-05427-60014-68+1695Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11, complete sequence.>gb:OSJN00274_1697787 Oryza sativa g
pir|T08984|T0898478504e-05421-60313-66+1653auxin response factor 7 homolog F6G3.110 - Arabidopsis thaliana>gb:ATCHRIV72_1546929 Arabidopsis thaliana DNA chromosome
sp|Q93YR9|ARFP_ARATH79504e-05421-60313-66+1670Auxin response factor 16.>gb:AY059792_1564638 Arabidopsis thaliana putative transcription factor (At4g30080) mRNA, compl
gb:AP001539_182128480497e-05439-62418-79+1699Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0708G02.
gb:AB071300_152275881497e-05439-62414-75+1695Oryza sativa OsARF16 mRNA for auxin response factor 16, partial cds.
gb:AP003766_183322182499e-05424-52518-51+1700Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0009H10.>gb:AP005395_1851035 Oryza sativa (
gb:AB071299_152275783499e-05424-52518-51+1700Oryza sativa OsARF10 mRNA for auxin response factor 10, partial cds.
gb:AC124143_174042384482e-04439-62438-94+1719Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence.
gb:AB071290_152274885482e-04439-62438-94+1712Oryza sativa OsETTIN1 mRNA for Arabidopsis ETTIN-like protein 1, complete cds.
gb:AE016959_102311286472e-04424-61811-75+1698Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence.>gb:AC024594_1539347 Oryza sativa chromosome 10
pir|C86467|C8646787473e-04421-53721-59+1619hypothetical protein F23M19.4 - Arabidopsis thaliana>gb:AE005172_892231 Arabidopsis thaliana chromosome 1, top arm compl
gb:AP003249_182627288473e-04439-53782-114+1731Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05.>gb:AP003268_1826793 Oryza sativa (
gb:OSJN00076_169442589464e-04442-54328-61+1529Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence.
pir|G86476|G8647690464e-04421-53721-59+1767protein F15O4.37 [imported] - Arabidopsis thaliana>gb:AE005172_892323 Arabidopsis thaliana chromosome 1, top arm complet
pir|E86468|E8646891464e-04439-6034-55+1620protein F12K21.26 [imported] - Arabidopsis thaliana>gb:AE005172_892241 Arabidopsis thaliana chromosome 1, top arm comple
gb:AP006168_186122292450.001421-61815-75+1681Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1469H02.
gb:AY056184_156350993440.002424-52514-47+1585Arabidopsis thaliana auxin response factor ARF17 (At1g77850) mRNA, complete cds.
gb:AC012193_153756494440.002424-52514-47+1596Arabidopsis thaliana chromosome 1 BAC T32E8 genomic sequence, complete sequence.
gb:A63701_145010295440.002424-52514-47+1354Sequence 11 from Patent WO9723618.
sp|Q84WU6|ARFQ_ARATH96440.002424-52514-47+1585Auxin response factor 17.>gb:BT002749_1636352 Arabidopsis thaliana clone C104833 auxin response factor ARF17 (At1g77850)
gb:F23M19_167795697430.005439-5254-32+133Arabidopsis thaliana chromosome 1 BAC F23M19 sequence, complete sequence.
gb:AB084669_152438098410.014439-62423-83+1648Nicotiana tabacum NtWAF mRNA for hypothetical protein, complete cds.
gb:AP003835_183401099390.055424-567274-322+1585Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1506_G02.>gb:AP003861_1834442 Oryza sativa
gb:AP003835_1834004100370.27430-53419-54+1752Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1506_G02.>gb:AP003861_1834436 Oryza sativa
gb:AP003835_1834006101351.3430-52816-49+1762Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1506_G02.>gb:AP003861_1834438 Oryza sativa
gb:AL731541_1932528102333.09-13140-79+3167Human DNA sequence from clone RP11-472K8 on chromosome 10 Contains the 3' end of the CDH23 gene for cadherin related 23,
gb:AK074172_1912406103333.09-13140-79+3167Homo sapiens mRNA for FLJ00245 protein.
gb:AP003835_1834005104333.9430-52816-49+1407Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1506_G02.>gb:AP003861_1834437 Oryza sativa