Clone JMFS028A04 [sequences]

previous contigF:007362 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AF384037_179414612762e-73186-64413-165+3453Zea mays nucleosome/chromatin assembly factor C (nfc102) mRNA, complete cds.
gb:AF250047_178084722762e-73186-64413-165+3453Zea mays WD-repeat protein RBAP1 (rbap1) mRNA, complete cds.
gb:AY100481_157694432763e-73186-64413-165+3453Zea mays nucleosome/chromatin assembly factor group C (nfc101) mRNA, complete cds.
gb:AX076396_146065042763e-73186-64413-165+3453Sequence 3 from Patent WO0104285.
sp|O22607|MSI4_ARATH52755e-7396-64437-218+3507WD-40 repeat protein MSI4.>pir|G84577|G84577 probable WD-40 repeat protein, MSI4 [imported] - Arabidopsis thaliana>gb:AY
gb:AC005917_153319662748e-73186-64416-168+3457Arabidopsis thaliana chromosome 2 clone F3P11 map CIC06E08, complete sequence.
gb:AF250048_178084872741e-72186-64413-165+3182Zea mays WD-repeat protein RBAP2 (rbap2) gene, partial cds.
gb:AF028711_176236682723e-72186-64416-168+3457Arabidopsis thaliana WD-40 repeat protein MSI4 (MSI4) mRNA, complete cds.
gb:AP002901_182373592662e-70186-64412-164+3453Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456F08.
gb:AJ631221_1812780102655e-70186-6448-160+3458Silene diclinis partial mRNA for putative WD repeat protein.
gb:AJ631218_1812777112655e-70186-6448-160+3458Silene dioica partial mRNA for putative WD repeat protein.>gb:AJ631219_1812778 Silene dioica partial mRNA for putative W
gb:SLA310656_1715246122655e-70186-64417-169+3473Silene latifolia partial wdr1x gene for putative WD-repeat protein exons 1-15.
gb:SLA18519_1715241132655e-70186-64416-168+3472Silene latifolia mRNA for X1 protein.
gb:SLA18517_1715239142632e-69186-64416-168+3472Silene latifolia mRNA for Y1 protein.
gb:AJ631222_1812781152617e-69186-6448-160+3458Silene noctiflora partial mRNA for putative WD repeat protein.
gb:AF250049_1780849162411e-62186-6441-153+3168Zea mays WD-repeat protein RBAP3 (rbap3) mRNA, partial cds.
pir|T09936|T09936172193e-56186-64456-207+3496hypothetical protein T16L4.240 - Arabidopsis thaliana>gb:ATCHRIV71_1546894 Arabidopsis thaliana DNA chromosome 4, contig
gb:BT010610_1640556182141e-54186-64456-198+3487Arabidopsis thaliana At4g29730 gene, complete cds.>gb:AK176425_1818413 Arabidopsis thaliana mRNA for WD-40 repeat-like p
gb:SLA18518_1715240192032e-51273-6441-124+3428Silene latifolia Y1 gene.
gb:SLA310655_1715245201994e-50273-6441-125+3429Silene latifolia partial wdr1y gene for putative WD-repeat protein exons 2-15.
gb:AY082378_1569178211081e-22456-6441-63+3321Silene conica SlX1-like protein mRNA, partial cds.
sp|O22466|MSI1_LYCES22911e-17186-64419-177+3424WD-40 repeat protein MSI1.>pir|T04324|T04324 G1/S transition control protein-binding protein MSI1 - tomato>gb:AF016845_1
gb:AY084036_156929323896e-17489-6441-52+3286Silene latifolia X1 protein gene, partial cds.>gb:AY084037_1569294 Silene latifolia Y1 protein gene, partial cds.>gb:AY0
gb:AF440219_180005024898e-17186-64425-183+3431Zea mays cultivar B73 MSI type nucleosome/chromatin assembly factor C (nfc103) mRNA, complete cds.
sp|O22467|MSI1_ARATH25881e-16186-64419-177+3424WD-40 repeat protein MSI1.>gb:CQ887959_1454884 Sequence 37 from Patent WO2004085644.>gb:AB019228_1514097 Arabidopsis tha
gb:AY084042_156929926872e-16489-6441-52+3286Silene flos-jovis XY1 protein gene, partial cds.
gb:AX076394_146064927872e-16186-64425-183+3431Sequence 1 from Patent WO0104285.
gb:AY084040_156929728859e-16489-6441-52+3286Silene vulgaris XY1 protein gene, partial cds.
gb:BC042283_254810329835e-15186-64418-175+3425Xenopus laevis retinoblastoma binding protein 7, mRNA (cDNA clone MGC:53418 IMAGE:5571746), complete cds.
gb:BC088588_256571830826e-15186-64419-176+3425Xenopus tropicalis hypothetical LOC496866, mRNA (cDNA clone MGC:97809 IMAGE:6991409), complete cds.
gb:HSIEF9306_201437131826e-15186-64419-176+3410H.sapiens IEF 9306 mRNA.
gb:CQ887961_145488532826e-15186-64419-176+3425Sequence 39 from Patent WO2004085644.>gb:AF097750_2473289 Gallus gallus chromatin assembly factor 1 p48 subunit mRNA, co
sp|Q60972|RBB4_MOUSE33826e-15186-64419-176+3461Chromatin assembly factor 1 subunit C (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit)
sp|Q09028|RBB4_HUMAN34826e-15186-64419-176+3425Chromatin assembly factor 1 subunit C (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit)
gb:BC080146_256157735828e-15186-64418-175+3297Xenopus tropicalis hypothetical protein MGC76124, mRNA (cDNA clone MGC:89776 IMAGE:7027693), complete cds.
gb:BC067546_255472436828e-15186-64418-176+3448Danio rerio retinoblastoma binding protein 4, like, mRNA (cDNA clone MGC:85617 IMAGE:6524543), complete cds.
gb:BC064219_255377237828e-15186-64418-175+3425Xenopus tropicalis hypothetical protein MGC76124, mRNA (cDNA clone MGC:76124 IMAGE:5309101), complete cds.
gb:BC072311_255656238821e-14186-64419-176+3425Xenopus laevis hypothetical protein MGC82618, mRNA (cDNA clone MGC:82618 IMAGE:5047944), complete cds.
gb:BC063984_255368439811e-14186-64419-176+3424Danio rerio retinoblastoma binding protein 4, mRNA (cDNA clone MGC:77854 IMAGE:7002322), complete cds.
gb:BC045315_254915940811e-14186-64419-176+3424Danio rerio retinoblastoma binding protein 4, mRNA (cDNA clone MGC:55349 IMAGE:2601332), complete cds.
gb:AY394940_253168341811e-14186-64419-176+3424Danio rerio clone RK046A1D12 retinoblastoma binding protein 4 mRNA, complete cds.
gb:BC052110_255045942812e-14186-64418-176+3426Danio rerio retinoblastoma binding protein 4, like, mRNA (cDNA clone MGC:56477 IMAGE:5776911), complete cds.
gb:AF374376_118815543802e-14186-64424-179+3426Oikopleura dioica clone BAC clone 001, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces.
gb:CR857269_118151344802e-14186-64419-176+3463Pongo pygmaeus mRNA; cDNA DKFZp469A0122 (from clone DKFZp469A0122).
sp|Q24572|CAF1_DROME45803e-14186-64423-180+3430Chromatin assembly factor 1 P55 subunit (CAF-1 P55 subunit) (dCAF-1) (Nucleosome remodeling factor 55 kDa subunit) (NURF
gb:AE017347_175792046795e-14186-64127-188+3435Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence.
gb:BC077257_255997347781e-13186-64419-176+3425Xenopus laevis retinoblastoma A associated protein, mRNA (cDNA clone MGC:79922 IMAGE:4968802), complete cds.
gb:AL929302_193324948772e-13186-64462-219+3469Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open
gb:AL929302_193324849772e-13186-64413-170+3420Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open
sp|Q60973|RBB7_MOUSE50772e-13186-64418-175+3425Histone acetyltransferase type B subunit 2 (Retinoblastoma binding protein p46) (Retinoblastoma-binding protein 7) (RBBP
sp|Q16576|RBB7_HUMAN51772e-13186-64418-175+3425Histone acetyltransferase type B subunit 2 (Retinoblastoma binding protein P46) (Retinoblastoma-binding protein 7) (RBBP
gb:AF073787_247172152773e-13186-64419-176+3425Xenopus laevis retinoblastoma A associated protein mRNA, complete cds.
gb:AY088045_157306953773e-13186-64416-167+3415Arabidopsis thaliana clone 40637 mRNA, complete sequence.
gb:AK078349_117228254773e-13186-64418-175+3425Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:6530404A07 product:hypothetical
sp|O22468|MSI2_ARATH55773e-13186-64416-167+3415WD-40 repeat protein MSI2.>pir|B84544|B84544 probable WD-40 repeat protein, MSI2 [imported] - Arabidopsis thaliana>gb:AC
gb:CQ887965_145488756773e-13186-63568-222+3222Sequence 43 from Patent WO2004085644.
gb:AF297468_125995557773e-13186-64419-175+3308Schistosoma mansoni strain NMRI chromatin assembly factor 1 small subunit-like protein (RBAP48) mRNA, complete cds.
gb:CR380948_164935358764e-13186-56932-162+3419Candida glabrata strain CBS138 chromosome B complete sequence.
gb:CR860642_118470159766e-13186-64418-175+3426Pongo pygmaeus mRNA; cDNA DKFZp459K2224 (from clone DKFZp459K2224).
gb:AF279275_248401860751e-12186-64418-174+3424Gallus gallus Rbap46 polypeptide mRNA, complete cds.
pir|JC7558|JC755861751e-12186-64418-174+3424chromatin assembly factor-1 p48 subunit homolog, p46 - chicken
pir|T38386|T3838662751e-12186-64422-181+3408hypothetical wd-40 repeat protein - fission yeast (Schizosaccharomyces pombe)>gb:SPAC25H1_1717435 S.pombe chromosome I c
gb:CNS07EGE_137366263742e-12186-64413-157+3384chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora).
gb:CR382124_165637164728e-12186-61715-164+3408Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:AP006149_186095965711e-11138-6441-161+3410Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11.
pir|T23391|T2339166704e-11186-56916-149+3417hypothetical protein K07A1.12 - Caenorhabditis elegans>gb:AF116530_1242527 Caenorhabditis elegans synthetic multivulva p
gb:AF016848_176151667699e-11186-64417-168+3424Arabidopsis thaliana WD-40 repeat protein (MSI3) mRNA, complete cds.
sp|O22469|MSI3_ARATH68699e-11186-64417-168+3424WD-40 repeat protein MSI3.>pir|T05775|T05775 G1/S transition control protein-binding protein MSI3 - Arabidopsis thaliana
gb:AY093418_157534869672e-10186-5662-124+3382Zea mays nucleosome/chromatin assembly factor 104 (nfc104) mRNA, complete cds.
gb:BT002870_163646170666e-10186-64417-168+3424Arabidopsis thaliana clone RAFL14-87-D13 (R20340) putative WD-40 repeat protein (MSI3) (At4g35050) mRNA, complete cds.
sp|P90917|RBA1_CAEEL71658e-10201-64417-170+3412Trp-Asp repeats containing protein RBA-1.>pir|T23385|T23385 hypothetical protein K07A1.11 - Caenorhabditis elegans>gb:CE
pir|T41054|T4105472628e-09186-64428-181+3430probable chromosome assembly factor, beta transducin - fission yeast (Schizosaccharomyces pombe)>gb:SPCC1672_1720982 S.p
sp|P39984|HAT2_YEAST73597e-08186-56612-146+3401Histone acetyltransferase type B subunit 2 (EC 2.3.1.48).>pir|S50533|S50533 hypothetical protein YEL056w - yeast (Saccha
gb:CR382125_165827774573e-07186-59022-166+3417Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:AE016818_174789975574e-07186-61723-177+3417Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence.
sp|P90916|RBA2_CAEEL76551e-06243-5693-117+3385Trp-Asp repeats containing protein RBA-2.
gb:PFMAL1P2_139436277551e-06189-59946-188+3446Plasmodium falciparum DNA from MAL1P2.
sp|P13712|MSI1_YEAST78542e-06186-56921-158+3422Chromatin assembly factor 1 P50 subunit (CAF-1 P50 subunit) (MSI1 protein) (IRA1 multicopy suppressor).>pir|S07865|BVBYM
gb:AE016816_174670879543e-06186-56946-169+3423Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence.
gb:BC015123_197496280527e-06318-6445-116+3365Homo sapiens, Similar to retinoblastoma-binding protein 4, clone IMAGE:3686783, mRNA, partial cds.
gb:AC147427_174470381521e-05444-644304-368+3615Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence.
gb:CR380959_165387882503e-05189-56924-160+3419Candida glabrata strain CBS138 chromosome M complete sequence.
gb:CR382128_166090083504e-05186-58429-168+3409Yarrowia lipolytica chromosome B of strain CLIB99 of Yarrowia lipolytica.
gb:AL929302_193325284496e-05471-64440-95+3285Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open
gb:CR382138_167103485496e-05192-56946-204+3472Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii.
gb:CR382139_167274886482e-04186-59929-174+3460Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii.
gb:CR382138_167184287482e-04186-57223-150+3415Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii.
gb:PFMAL13_119134288450.001186-64439-202+3582Plasmodium falciparum 3D7 chromosome 13, *** SEQUENCING IN PROGRESS ***, 33 ordered pieces.
pir|A84578|A8457889440.002405-587135-194+3469probable WD-40 repeat protein [imported] - Arabidopsis thaliana>gb:AC005917_1533198 Arabidopsis thaliana chromosome 2 cl
gb:AF470350_180288190430.005435-605169-224+3489Tortula ruralis WD40 mRNA, complete cds.
sp|O14021|PRW1_SCHPO91410.020186-57828-162+3431RbAp48-related WD40-repeat protein prw1.>pir|T38471|T38471 probable chromatin assembly factor - fission yeast (Schizosa
gb:AX973062_148837192400.034186-29019-53+355Sequence 3865 from Patent EP1104808.
gb:AC132492_174122093390.099318-56685-166+3268Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence.>gb:AC135418_1742219 Oryza sativa
gb:AY167751_158630794390.099429-6449-77+3124Capsella rubella putative WD-40 repeat protein (MSI2) gene, partial cds, alternatively spliced.>gb:AY167752_1586308 Caps
gb:AY167751_158630695370.22372-6448-87+3134Capsella rubella putative WD-40 repeat protein (MSI2) gene, partial cds, alternatively spliced.>gb:AY167753_1586309 Caps
gb:BC086398_210958596360.6419-17742-105+1346Rattus norvegicus CSX-associated LIM, mRNA (cDNA clone MGC:105665 IMAGE:7303205), complete cds.
gb:AP004155_183831497342.4530-64056-92-2204Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_D12.
gb:CR380954_165109098342.4477-623386-434+3513Candida glabrata strain CBS138 chromosome H complete sequence.
gb:MMGT10_211510899333.219-17742-105+1194M.musculus En-2/lacZ junction mRNA (Gt10).
gb:BC004777_2089782100333.219-17742-105+1375Mus musculus RIKEN cDNA 2410043F08 gene, mRNA (cDNA clone MGC:7174 IMAGE:3257486), complete cds.
gb:AF513359_2067280101333.219-17742-105+1375Mus musculus CSX-associated LIM (Cal) mRNA, complete cds.
pir|A38203|A38203102333.219-17742-105+1194proline-rich protein - mouse (fragment)
gb:AP003896_1834939103327.1456-605205-265+3466Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04.
pir|T39719|T39719104327.1477-632314-367+3435beta transducin - fission yeast (Schizosaccharomyces pombe)>gb:SPBC17D11_1719324 S.pombe chromosome II cosmid c17D11.
gb:AF140359_2056092105329.3456-64472-130+3472Rattus norvegicus coronin relative protein mRNA, complete cds.
gb:AE016816_1746549106329.322-1291875-1910+11963Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence.