Clone JMFS013F06 [sequences]

previous contigF:003709 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
sp|P31542|CLAB_LYCES11642e-4668-5501-157+2923ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplast precursor.>pir|B35905|B35905 endopeptidase
sp|P31541|CLAA_LYCES21536e-4365-5501-159+2926ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplast precursor.>pir|A35905|A35905 endopeptidase
gb:AF043539_176374531441e-4068-5501-156+2891Spinacia oleracea ClpC protease (clpC) mRNA, chloroplast gene encoding chloroplast protein, complete cds.
sp|P35100|CLPA_PEA41373e-3868-5501-157+2922ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor.>pir|S31164|S31164 endopeptidase Clp
gb:AB017063_151333451325e-3774-5506-160+2929Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7.>gb:AY102125_1577730 Arabidopsis thaliana AT5g50920/K3K7_
pir|T52292|T5229261294e-3674-5506-159+2928endopeptidase Clp (EC 3.4.21.92) ATP-binding chain C, chloroplast [imported] - Arabidopsis thaliana>gb:AF022909_1762028
pir|T49283|T4928371141e-31176-55056-180+2952AtClpC - Arabidopsis thaliana>gb:AX765872_1474625 Sequence 81 from Patent WO03008440.>gb:ATT21J18_1555142 Arabidopsis th
pir|T52456|T5245681141e-31176-55056-180+2952endopeptidase Clp ATP-binding chain C [imported] - Arabidopsis thaliana>gb:AB022324_1515222 Arabidopsis thaliana mRNA fo
gb:AY056787_156383691141e-31176-55056-180+2558Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, complete cds.
pir|S37557|S37557101072e-29239-5504-107+2874endopeptidase Clp ATP-binding chain A, chloroplast - rape (fragment)
sp|P46523|CLPA_BRANA111072e-29239-5504-107+2874ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor (Fragment).>gb:BNCLPA_1633519 B.napus
gb:OSJN00240_1697237121011e-27182-5501-123+2888Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence.
pir|S71553|S7155313942e-25344-55014-82+2839endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity] - Synechococcus sp. (strain PCC 7942)>gb:SSU16134_19
pir|AH2180|AH218014943e-25347-55016-83+2839endopeptidase Clp ATP-binding chain [imported] - Nostoc sp. (strain PCC 7120)>gb:BA000019_683988 Nostoc sp. PCC 7120 DN
gb:AP008231_58094816946e-25344-55014-82+2839Synechococcus elongatus PCC 6301 DNA, complete genome.
gb:BX569691_77584015926e-25350-5501-67+2846Synechococcus sp. WH8102 complete genome; segment 3/7.
sp|O78410|CLPC_GUITH17926e-25350-5501-67+2819ATP-dependent Clp protease ATP-binding subunit clpA homolog.>gb:AF041468_1763464 Guillardia theta complete plastid genom
pir|S76330|S7633018928e-25350-5501-67+2821endopeptidase Clp (EC 3.4.21.-) ATP-binding chain C [similarity] - Synechocystis sp. (strain PCC 6803)>gb:BA000022_68957
gb:BA000045_74213919928e-25350-5501-67+2819Gloeobacter violaceus PCC 7421 DNA, complete genome.
gb:AE017164_39556320911e-24350-5501-67+2856Prochlorococcus marinus subsp. marinus str. CCMP1375 section 4 of 6 of the complete genome.>gb:AE017126_1031232 Prochlor
gb:BA000039_72609221912e-24350-5501-67+2824Thermosynechococcus elongatus BP-1 DNA, complete genome.
gb:BX572098_79840322903e-24350-5501-67+2859Prochlorococcus marinus MIT9313 complete genome; segment 4/7.
gb:BX572092_79671423904e-24350-5501-67+2842Prochlorococcus marinus MED4 complete genome; segment 3/5.
sp|P51332|CLPC_PORPU24898e-24350-5501-67+2821ATP-dependent Clp protease ATP-binding subunit clpA homolog.>pir|S73253|S73253 endopeptidase Clp (EC 3.4.21.-) ATP-bindi
sp|Q9TM05|CLPC_CYACA26891e-23344-55030-98+2854ATP-dependent Clp protease ATP-binding subunit clpA homolog.>gb:AF022186_1761876 Cyanidium caldarium strain RK1 chloropl
gb:AY673996_162140825881e-23350-5501-67+2823Gracilaria tenuistipitata var. liui chloroplast, complete genome.
pir|T47485|T4748528874e-21350-5501-67+2341clpC-like protein - Arabidopsis thaliana>gb:ATF9K21_1551403 Arabidopsis thaliana DNA chromosome 3, BAC clone F9K21.
gb:AB002583_150880727842e-22350-5501-67+2821Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D.
gb:BA000045_74214331812e-14350-5501-67+2330Gloeobacter violaceus PCC 7421 DNA, complete genome.
pir|AE2051|AE205129784e-18350-5501-67+2814endopeptidase Clp ATP-binding chain [imported] - Nostoc sp. (strain PCC 7120)>gb:BA000019_682952 Nostoc sp. PCC 7120 DN
sp|P49574|CLPC_ODOSI30633e-15350-5411-64+2885ATP-dependent Clp protease ATP-binding subunit clpA homolog.>pir|S78246|S78246 endopeptidase Clp (EC 3.4.21.-) ATP-bindi
gb:BX248359_76324832632e-11350-5506-72+2883Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 6/8.
gb:BA000036_72040533633e-11350-5501-67+2925Corynebacterium glutamicum ATCC 13032 DNA, complete genome.>gb:BX927156_834211 Corynebacterium glutamicum ATCC 13032, IS
gb:AX065707_145976734633e-11350-5501-67+2327Sequence 51 from Patent WO0100842.
gb:BA000035_71731035634e-11350-5501-67+2927Corynebacterium efficiens YS-314 DNA, complete genome.
gb:AE000516_2383136621e-10350-5501-67+2848Mycobacterium tuberculosis CDC1551, complete genome.
gb:BA000030_70258437612e-10350-5501-67+2841Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
gb:BA000030_70048638612e-10350-5501-67+2842Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
pir|T36384|T3638439612e-10350-5501-67+2841probable ATP-binding proteinase - Streptomyces coelicolor>gb:SCO939116_177046 Streptomyces coelicolor A3(2) complete gen
gb:AP006618_55680640603e-10350-5501-67+2851Nocardia farcinica IFM 10152 DNA, complete genome.
sp|O06286|CLPC_MYCTU41603e-10350-5501-67+2848Probable ATP-dependent Clp protease ATP-binding subunit.>pir|E70954|E70954 endopeptidase Clp (EC 3.4.21.-) ATP-binding c
gb:AE017228_41116642603e-10350-5501-67+2843Mycobacterium avium subsp. paratuberculosis str. k10, section 2 of 16 of the complete genome.>gb:AE016958_1054570 Mycoba
gb:AP006840_57031943605e-10350-5681-73+2833Symbiobacterium thermophilum DNA, complete genome.
sp|P24428|CLPC_MYCLE44592e-09350-5501-67+2848Probable ATP-dependent Clp protease ATP-binding subunit.>pir|C86938|C86938 probable ATP-dependent Clp proteinase [import
gb:MLPUTATP_14877645592e-09350-5501-67+2649Mycobacterium leprae DNA for putative atp operon.
pir|S11163|S1116346592e-09350-5501-67+2649endopeptidase Clp ATP-binding chain C - Mycobacterium leprae (fragment)
gb:MSGA15AGA_15037848583e-09350-5501-67+297M.leprae antigen 15 kDa gene, complete cds.
gb:AE017283_43006847572e-09350-5501-67+2844Propionibacterium acnes KPA171202, complete genome.
gb:AE016822_34105649579e-09350-5501-67+2839Leifsonia xyli subsp. xyli str. CTCB07, complete genome.
gb:AE014295_31074950562e-08350-5501-67+2869Bifidobacterium longum NCC2705, complete genome.
gb:BA000028_69448051559e-07350-5502-68+2809Oceanobacillus iheyensis HTE831 DNA, complete genome.
gb:AE016850_34858952559e-07350-5505-71+2840Tropheryma whipplei str. Twist, section 1 of 3 of the complete genome.>gb:BX251410_764289 Tropheryma whipplei TW08/27, c
gb:BX294144_76878353542e-06350-5531-68+2859Pirellula sp. strain 1 complete genome; segment 12/24.
pir|G72079|G7207955534e-06350-5501-67+2845endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity] - Chlamydophila pneumoniae (strain CWL029)>gb:AE0016
sp|Q9Z8A6|CLPC_CHLPN56534e-06350-5501-67+2845Probable ATP-dependent Clp protease ATP-binding subunit.>pir|G81590|G81590 ATP-dependent Clp proteinase, ATP-binding cha
sp|P37571|CLPC_BACSU57534e-06350-5502-68+2810Negative regulator of genetic competence clpC/mecB.>pir|I40508|I40508 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain
gb:AE017333_44604058528e-06350-5502-68+2810Bacillus licheniformis DSM 13, complete genome.>gb:CP000002_855863 Bacillus licheniformis ATCC 14580, complete genome.>g
pir|G83662|G8366259521e-05350-5502-68+2813class III stress response-related ATPase clpC [imported] - Bacillus halodurans (strain C-125)>gb:BA000004_654049 Bacillu
pir|C86545|C8654560521e-05350-5501-67+2845ClpC proteinase [imported] - Chlamydophila pneumoniae (strain J138)>gb:BA000008_663808 Chlamydophila pneumoniae J138 ge
gb:AE016995_37441861511e-05350-5501-67+2846Chlamydophila caviae GPIC section 2 of 4 of the complete genome.>gb:AE015925_994097 Chlamydophila caviae GPIC complete g
sp|O84288|CLPC_CHLTR62512e-05350-5501-67+2854Probable ATP-dependent Clp protease ATP-binding subunit.>pir|C71533|C71533 endopeptidase Clp (EC 3.4.21.-) ATP-binding c
sp|Q9PKA8|CLPC_CHLMU63512e-05350-55017-83+2870Probable ATP-dependent Clp protease ATP-binding subunit.>pir|B81689|B81689 ATP-dependent Clp proteinase, ATP-binding cha
gb:BA000043_73665564502e-05350-5502-68+2810Geobacillus kaustophilus HTA426 DNA, complete genome.
gb:AE013175_28989366503e-05347-5502-69+2816Thermoanaerobacter tengcongensis MB4, section 202 of 244 of the complete genome.>gb:AE008691_1111958 Thermoanaerobacter
gb:BA000045_74161765493e-05350-5501-67+2778Gloeobacter violaceus PCC 7421 DNA, complete genome.
gb:BX908798_83106767495e-05350-5501-67+2847Parachlamydia-related symbiont UWE25, complete genome.
gb:AE017024_38037768495e-05350-5832-80+2811Bacillus anthracis str. Ames section 1 of 18 of the complete genome.>gb:AE017225_405494 Bacillus anthracis str. Sterne,
gb:AE016998_37514069495e-05350-5832-80+2811Bacillus cereus ATCC 14579 section 1 of 18 of the complete genome.>gb:AE016877_1015390 Bacillus cereus ATCC 14579 comple
gb:CP000001_85071370496e-05350-5502-68+2811Bacillus cereus ZK, complete genome.
gb:AE017322_44268271481e-04359-56879-148+2820Listeria monocytogenes str. 4b F2365, section 1 of 10 of the complete genome.>gb:AE017262_1075038 Listeria monocytogenes
gb:LMU40604_14166172481e-04359-56879-148+2825Listeria monocytogenes ClpC ATPase (mec) gene, complete cds.
pir|AI1465|AI146573481e-04359-56879-148+2820endopeptidase Clp ATP-binding chain C [imported] - Listeria innocua (strain Clip11262)>gb:AL596164_537611 Listeria innoc
pir|AI1103|AI110374481e-04359-56879-148+2820endopeptidase Clp ATP-binding chain C [imported] - Listeria monocytogenes (strain EGD-e)>gb:AL591974_534724 Listeria mon
gb:CP000027_7907175472e-04353-5505-70+2824Dehalococcoides ethenogenes 195, complete genome.
gb:AB083540_1052776464e-04362-56874-142+2175Bacillus cereus clpC gene for stress-related ATPase, partial cds.
gb:AP006627_56244877457e-04362-55084-146+2818Bacillus clausii KSM-K16 DNA, complete genome.
pir|H72404|H7240478440.002350-5381-63+2820endopeptidase Clp, ATP-binding chain - Thermotoga maritima (strain MSB8)>gb:AE001705_38118 Thermotoga maritima MSB8 sec
gb:BA000033_71077279430.005362-55080-142+2818Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2.
gb:AE017288_43257580430.005362-5774-76+2846Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, section 2 of 14 of the complete sequence.>
gb:AE011226_27062981430.005362-5774-76+2846Leptospira interrogans serovar lai str. 56601 chromosome I, section 35 of 397 of the complete sequence.>gb:AE010300_1004
gb:CP000029_8078982430.005362-55080-142+2817Staphylococcus epidermidis RP62A, complete genome.>gb:AE016744_321937 Staphylococcus epidermidis ATCC 12228, section 1 o
pir|F89819|F8981983430.005362-55080-142+2818endopeptidase [imported] - Staphylococcus aureus (strain N315)>gb:BA000017_676222 Staphylococcus aureus subsp. aureus Mu
gb:BA000045_74266354403e-06362-5509-71+2348Gloeobacter violaceus PCC 7421 DNA, complete genome.
gb:AP004777_184491584400.023344-54771-136+2938Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05.
gb:AY166599_158618185400.023344-54771-136+2938Oryza sativa (indica cultivar-group) ATP-dependent Clp protease ATP-binding subunit precursor (CLPD1) mRNA, complete cds
gb:OSJN00288_169800986400.030179-4333-97+2877Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02, complete sequence.
gb:AF497482_51655087400.030362-55642-106+2797Micromonospora echinospora calicheamicin biosynthetic locus, complete sequence.
pir|C97292|C9729288390.087350-5442-66+2813ATPases with chaperone activity clpC, two ATP-binding domain CAC3189 [imported] - Clostridium acetobutylicum>gb:AE007814
gb:AY224705_59917289380.11392-5682-60+2166Bacillus weihenstephanensis strain WSBC 10311 ClpC (clpC) gene, partial cds.>gb:AY224706_599173 Bacillus weihenstephanen
gb:AY224703_59917090380.11392-5682-60+2166Bacillus weihenstephanensis strain WSBC 10206 ClpC (clpC) gene, partial cds.
gb:AY224698_59916591380.11392-5682-60+2166Bacillus cereus strain BGSC 6A5 ClpC (clpC) gene, partial cds.>gb:AY224699_599166 Bacillus thuringiensis serovar canaden
gb:AY224696_59916392380.11392-5682-60+2166Bacillus thuringiensis serovar israelensis strain ATCC 35646 ClpC (clpC) gene, partial cds.>gb:AY224697_599164 Bacillus
pir|B70412|B7041293380.15350-4331-28+2810endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity] - Aquifex aeolicus>gb:AE000733_26677 Aquifex aeolicu
gb:AY037264_156015894370.19347-43378-106+2640Arabidopsis thaliana AT5g51070/K3K7_27 mRNA, complete cds.
gb:AY224707_59917495370.19392-5502-54+2166Bacillus cereus strain 391-98 ClpC (clpC) gene, partial cds.
sp|P42762|ERD1_ARATH96370.19347-43378-106+2945ERD1 protein, chloroplast precursor.>pir|JN0901|JN0901 endopeptidase Clp ATP-binding chain C - Arabidopsis thaliana>gb:A
gb:AE016957_36721097370.33350-5471-66+2831Enterococcus faecalis V583, section 11 of 11 of the complete genome.>gb:AE016830_993698 Enterococcus faecalis V583, comp
gb:AF401667_50758698360.56362-5475-66+2709Lactobacillus sakei rrnC operon, partial sequence.
gb:AE012798_28568199360.56362-5445-65+2854Chlorobium tepidum TLS section 19 of 194 of the complete genome.>gb:AE006470_932849 Chlorobium tepidum TLS complete geno
sp|Q54316|HLYB_TREHY100350.74350-5501-69+2828Hemolysin B.>gb:SHTLYBA_183460 S.hyodysenteriae gene for tlyB hemolysin.
gb:AL935254_550908101332.8362-5445-65+2837Lactobacillus plantarum strain WCFS1 complete genome; segment 3/11.
gb:AY607765_1617546102333.7364-597144-227-2239Populus alba x Populus tremula fasciclin-like AGP 13 (FLA13) mRNA, complete cds.
gb:AP006618_560567103328.2376-55245-99-2147Nocardia farcinica IFM 10152 DNA, complete genome.
gb:CR522870_100755104328.2356-5504-68+2868Desulfotalea psychrophila LSv54 chromosome.