Clone JMFS012C11 [sequences]

previous contigF:003392 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:OSJN00253_16974361696e-11181-606105-208+1505Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08, complete sequence.
gb:AB030709_15185342551e-06514-6063-33+1353Triticum aestivum gene for AHM2, partial cds.
gb:OSJN00209_16967383543e-06178-606123-228+1385Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09, complete sequence.
gb:OSJN00167_16960664526e-06151-60363-176+1377Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0040D17, complete sequence.
gb:OSJN00120_16952385512e-05160-60389-199+1336Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033G08, complete sequence.>gb:OSJN00167_1696059 Oryza sativa g
gb:OSJN00120_16952326512e-05151-60386-199+1418Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033G08, complete sequence.
gb:AB025604_15162537481e-04178-31279-124+1225Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F2O15.>gb:BT004606_1637640 Arabidopsis thaliana At5g59380 gene
gb:AY863050_16309848472e-04490-60620-58+1292Zea mays methyl-binding domain protein MBD113 mRNA, complete cds.
gb:AP003875_18346719473e-04502-606337-371+1422Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_C05.>gb:AP003919_1835227 Oryza sativa
gb:AY888006_254764910457e-04184-32712-59+1257Gallus gallus methyl-CpG-binding domain protein 2 (MBD2) mRNA, complete cds.
gb:AF072245_205335811457e-04184-327158-205+1249Mus musculus testis specific methyl-CpG binding protein MBD2 (Mbd2) mRNA, complete cds.>gb:MM2MBD1_2113737 Mus musculus
gb:AF072243_205335612457e-04184-327158-205+1414Mus musculus methyl-CpG binding protein MBD2 (Mbd2) mRNA, complete cds.>gb:BC046607_2099310 Mus musculus methyl-CpG bind
gb:AY086606_157165313457e-04163-31228-78+1182Arabidopsis thaliana clone 261609 mRNA, complete sequence.
pir|T45595|T4559514457e-04163-31228-78+1182hypothetical protein F12A12.100 - Arabidopsis thaliana>gb:ATF12A12_1548299 Arabidopsis thaliana DNA chromosome 3, BAC cl
gb:AB084168_246371015440.002184-33611-61+1283Xenopus laevis mRNA for methyl-CpG binding protein MBD3, complete cds.
gb:HSMETHYL2_201871416440.002184-327155-202+1302Homo sapiens methyl-CpG binding protein 2 (MBD2) gene, exon 2 and alternatively spliced testis-specific methyl-CpG bindi
gb:AF072242_188085317440.002184-327155-202+1411Homo sapiens methyl-CpG binding protein MBD2 (MBD2) mRNA, complete cds.>gb:BC032638_1980587 Homo sapiens methyl-CpG bind
gb:AY238336_252138718430.004184-32711-58+1256Danio rerio methyl-CpG binding protein 2 (mbd2) mRNA, complete cds.
gb:AB061672_246290619420.010184-33611-61+1267Xenopus laevis mRNA for methyl-CpG binding protein MBD2, complete cds.
gb:BC071531_255626720410.013184-32111-56+1273Danio rerio methyl-CpG binding domain protein 3a, mRNA (cDNA clone MGC:86913 IMAGE:6905673), complete cds.
gb:AY398379_253190921410.013184-32111-56+1273Danio rerio clone RK121A1A12 methyl-CpG binding domain protein 3 (MBD3) mRNA, complete cds.
gb:AF170346_247829122400.030193-33613-60+1282Xenopus laevis methyl-CpG binding protein MBD3 (MBD3) mRNA, complete cds.
gb:AF072248_205335923400.039184-33611-61+1285Mus musculus methyl-CpG binding domain-containing protein MBD3 (Mbd3) mRNA, complete cds.>gb:AF120995_2055352 Mus muscul
gb:AF072246_188085424400.039190-3271-46+1146Homo sapiens testis specific methyl-CpG binding protein MBD2 (MBD2) mRNA, partial cds.
gb:AC005943_187506025400.039184-33611-61+1291Homo sapiens chromosome 19, cosmid R30538, complete sequence.>gb:AF072247_1880855 Homo sapiens methyl-CpG binding domain
gb:AY238339_131218826400.039184-52811-154+1326Branchiostoma floridae methyl-CpG binding protein 2/3 (Mbd2/3) mRNA, complete cds.
gb:OSJN00255_169749627380.15484-60620-65+1438Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence.
gb:AB015475_151257028370.19151-327170-227+1306Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMN10.>gb:BT014975_1641945 Arabidopsis thaliana At5g59800 gene,
gb:AY136403_158190429370.33490-60629-68+1746Arabidopsis thaliana unknown protein (At5g52230) mRNA, complete cds.>gb:BT000226_1634504 Arabidopsis thaliana unknown pr
gb:AB025603_151624430370.33490-60629-68+1746Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F17P19.
gb:BC043835_254829131360.43178-3277-58+1321Xenopus laevis methyl-CpG binding domain protein 1, mRNA (cDNA clone MGC:53260 IMAGE:5569883), complete cds.
gb:AY298900_252576732360.43184-336109-159+1524Danio rerio methyl-cytosine binding protein 2 (mecp2) mRNA, complete cds.
gb:AF051768_247074733360.56184-333101-150+1467Xenopus laevis methyl-CpG-binding protein 2 mRNA, complete cds.>gb:AF106951_2473965 Xenopus laevis methyl-CpG-binding pr
gb:GGARBP_257292734350.73184-333101-150+1344Gallus gallus mRNA for attachment region binding protein (ARBP).
gb:HSRNACPGB_202003535350.73184-33390-139+1476H.sapiens mRNA for methyl CpG binding protein 2.
gb:HSMECP2X_201869836350.73184-333100-149+1486H.sapiens mRNA for methyl-CpG-binding protein 2.
gb:HSMECP2_201869737350.73184-33391-140+1477H.sapiens MeCP-2 gene.
gb:HSM806231_201824538350.73184-333130-179+1516Homo sapiens mRNA; cDNA DKFZp686A24160 (from clone DKFZp686A24160).
gb:AY541280_195633339350.73184-333112-161+1498Homo sapiens methyl CpG binding protein 2 isoform B (MECP2) mRNA, complete cds.
gb:AF295597_189548440350.73184-333100-149+1486Macaca fascicularis methyl-CpG-binding protein 2 (MECP2) mRNA, complete cds.
gb:AX886192_148164541350.73184-333112-161+1219Sequence 2055 from Patent EP1033401.
pir|S57963|S5796342350.73184-33390-139+1476methyl CpG binding protein 2 - human (fragment)
sp|Q00566|MEC2_RAT43350.73184-333100-149+1492Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2).>pir|A41907|A41907 methyl-CpG-binding protein 2 - rat>gb:RATMECP2A
sp|Q9Z2D6|MEC2_MOUSE44350.73184-333100-149+1484Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2).>gb:AF072251_2053361 Mus musculus methyl-CpG binding protein 2 (Me
sp|P51608|MEC2_HUMAN45350.73184-333100-149+1486Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2).>gb:AF030876_1877681 Homo sapiens chromosome X clone Qc-8D3, RP4-6
gb:AY080662_156839446350.96181-330244-293+1425Arabidopsis thaliana unknown protein (At1g22310) mRNA, complete cds.>gb:AY133726_1581546 Arabidopsis thaliana clone U198
gb:AE014297_113918147350.96178-318364-409+11081Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003695_1221174 Drosophila melanogaster chromosome 3R, sec
gb:AE014297_113918048350.96178-318452-497+11169Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003695_1221173 Drosophila melanogaster chromosome 3R, sec
pir|A86356|A8635649350.96181-330343-392+1524hypothetical protein [imported] - Arabidopsis thaliana>gb:AE005172_891186 Arabidopsis thaliana chromosome 1, top arm com
gb:BC080900_256181550341.6184-33019-67+1640Xenopus tropicalis MBD1 protein, mRNA (cDNA clone IMAGE:6977305), partial cds.
gb:AB084169_246371151333.6184-33611-80+1302Xenopus laevis mRNA for methyl-CpG binding protein MBD3 long form, complete cds.>gb:BC077740_2560396 Xenopus laevis meth
gb:BC069837_210612852333.6184-32711-58+1588Mus musculus methyl-CpG binding domain protein 1, mRNA (cDNA clone MGC:76676 IMAGE:30435760), complete cds.
gb:AF072240_205335553333.6184-32711-58+1636Mus musculus methyl-CpG binding protein MBD1 (Mbd1) mRNA, complete cds.>gb:AF120978_2055351 Mus musculus domesticus meth
gb:AK004624_115246454333.6184-32711-58+1588Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200007A08 product:methyl-CpG binding domai
gb:AF170347_247829255334.8184-33611-81+1303Xenopus laevis methyl-CpG binding protein MBD3 long form (MBD3) mRNA, complete cds.
gb:BC081932_210817456326.2184-32711-58+1533Rattus norvegicus methyl-CpG binding domain protein 1 (predicted), mRNA (cDNA clone MGC:93958 IMAGE:7114194), complete c
gb:BC024812_209473357326.2184-31273-115+1554Mus musculus methyl-CpG binding domain protein 4, mRNA (cDNA clone MGC:36060 IMAGE:5356016), complete cds.
gb:AF072249_205336058326.2184-31273-115+1554Mus musculus methyl-CpG binding protein MBD4 (Mbd4) mRNA, complete cds.>gb:AF120996_2055353 Mus musculus domesticus meth
gb:AF527618_180840859326.2187-31832-74+1400Zea mays methyl binding domain protein MBD109 (mbd109) mRNA, complete cds.
gb:BC074695_255818960328.1184-33611-81+1301Xenopus tropicalis methyl-CpG binding domain protein 3, mRNA (cDNA clone MGC:69548 IMAGE:5336695), complete cds.
gb:HSPCM1_201947461328.1172-3272-58+1556H.sapiens mRNA for protein containing MBD 1.
gb:HSA564845_200906362328.1172-3272-58+1550Homo sapiens mRNA for methyl-CpG binding domain protein 1, splice form 6 (MBD1 gene).
gb:HS1MBD3_199742663328.1172-3272-58+1605Homo sapiens methyl-CpG binding protein 1 (MBD1) gene, exons 3 through 15a and complete cds.
gb:BC033242_198088164328.1172-3272-58+1549Homo sapiens methyl-CpG binding domain protein 1, transcript variant 3, mRNA (cDNA clone MGC:45928 IMAGE:5432943), compl
gb:BC011752_197318465328.1184-31586-129+1574Homo sapiens methyl-CpG binding domain protein 4, mRNA (cDNA clone MGC:19710 IMAGE:3534047), complete cds.>gb:CR450305_1
gb:AF532602_190617266328.1184-31586-129+1540Homo sapiens methyl-CpG binding domain protein 4 variant mRNA, complete cds; alternatively spliced.
gb:AF078833_188128067328.1172-3272-58+1503Homo sapiens methyl-CpG binding protein splice variant 4 (MBD1) mRNA, complete cds.
gb:AF078832_188127968328.1172-3272-58+1549Homo sapiens methyl-CpG binding protein splice variant 3 (MBD1) mRNA, complete cds.
gb:AF078831_188127869328.1172-3272-58+1586Homo sapiens methyl-CpG binding protein splice variant 2 (MBD1) mRNA, complete cds.
gb:AF078830_188127770328.1172-3272-58+1605Homo sapiens methyl-CpG binding protein splice variant 1 (MBD1) mRNA, complete cds.
gb:AF072250_188085671328.1184-31586-129+1580Homo sapiens methyl-CpG binding protein MBD4 (MBD4) mRNA, complete cds.>gb:AF114784_1884472 Homo sapiens methyl-CpG bind
gb:AE016817_174715172328.1151-273305-345+1623Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence.
gb:CR858402_118257773328.1172-3272-58+1605Pongo pygmaeus mRNA; cDNA DKFZp459N1432 (from clone DKFZp459N1432).
gb:CR857219_118146674328.1184-31586-129+1573Pongo pygmaeus mRNA; cDNA DKFZp469B1421 (from clone DKFZp469B1421).
gb:AY375291_61429275328.1211-34255-96+1471Buchnera aphidicola (Chaitophorus populeti) phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (his