Clone JMFN044M18 [sequences]

previous contigF:003477 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:BT003850_163697812141e-5494-6332-183+1209Arabidopsis thaliana clone RAFL15-48-D07 (R20842) putative VAMP protein SEC22 (At3g11660) mRNA, complete cds.
gb:ATAC009918_154309722132e-5494-6332-183+1209Arabidopsis thaliana chromosome III BAC T19F11 genomic sequence, complete sequence.>gb:AY088586_1573603 Arabidopsis thal
pir|B84775|B8477532025e-5185-6271-182+1210probable harpin-induced protein [imported] - Arabidopsis thaliana>gb:AC007017_1534957 Arabidopsis thaliana chromosome 2
pir|T49138|T4913841994e-5085-6271-181+1206hypothetical protein T10D17.10 - Arabidopsis thaliana>gb:ATT10D17_1554213 Arabidopsis thaliana DNA chromosome 3, BAC clo
pir|T08452|T0845251985e-5091-6272-180+1208hypothetical protein F22O6.150 - Arabidopsis thaliana>gb:ATF22O6_1549704 Arabidopsis thaliana DNA chromosome 3, BAC clon
gb:AB006700_150990261823e-4585-6331-185+1207Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHF15.>gb:BT010935_1640881 Arabidopsis thaliana At5g06330 gene,
pir|A85098|A8509871757e-4385-6271-183+1211hypothetical protein AT4g09590 [imported] - Arabidopsis thaliana>gb:ATCHRIV27_1544673 Arabidopsis thaliana DNA chromosom
pir|C84775|C8477581741e-4285-6271-183+1211probable harpin-induced protein [imported] - Arabidopsis thaliana>gb:AC007017_1534956 Arabidopsis thaliana chromosome 2
gb:ATT6G21_155633291672e-4085-6271-185+1210Arabidopsis thaliana DNA chromosome 5, BAC clone T6G21 (ESSA project).
gb:AP004654_1842725101502e-3585-6271-195+1227Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07.
gb:AP004753_1844431111442e-33106-6276-180+1224Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05.>gb:AP005609_1854844 Oryza sativa (
gb:AB017066_1513388121371e-31199-63346-192+1213Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MGN6.>gb:BT010854_1640800 Arabidopsis thaliana At5g53730 mRNA,
gb:OSJN00010_1693230131372e-31199-62738-179+1220Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence.>gb:OSJN00036_1693688 Oryza sativa gen
gb:OSJN00092_1694769141311e-2994-6275-188+1220Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence.
pir|T01376|T01376151102e-23199-63338-182+1202hypothetical protein F3D13.5 - Arabidopsis thaliana>gb:F3D13_1678222 Arabidopsis thaliana BAC F3D13.
pir|D85018|D85018161102e-23199-63363-207+1227probable hypoersensitive response protein [imported] - Arabidopsis thaliana>gb:ATCHRIV3_1544827 Arabidopsis thaliana DNA
pir|D84775|D8477517798e-14199-61560-199+1227hypothetical protein At2g35980 [imported] - Arabidopsis thaliana>gb:AB047812_1520672 Arabidopsis thaliana YLS9 mRNA for
gb:AB162221_152862218765e-13199-63064-208+1228Capsicum chinense HIN1-Cc mRNA for hin1 like protein, complete cds.
gb:AB127581_152833719742e-12199-63064-208+1229Nicotiana tabacum hin9 mRNA for harpin inducing protein 9, complete cds.
gb:AB091429_152504220742e-12199-63064-208+1229Nicotiana tabacum mRNA for hin1, complete cds.>gb:AF212183_1777426 Nicotiana tabacum harpin inducing protein (hin1) gene
pir|T03265|T0326521742e-12199-63056-200+1221hin1 protein - common tobacco>gb:NTHIN1_1691580 N.tabacum mRNA for hin1 gene.
gb:AB127582_152833822733e-12199-63064-208+1229Nicotiana tabacum hin18 mRNA for harpin inducing protein 18, complete cds.
gb:AB005243_150953423711e-11199-61548-185+1207Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRN17.
gb:AY155669_158538424695e-11199-63062-206+1225Solanum tuberosum hin1-like protein mRNA, complete cds.
gb:AY485992_160853825681e-10199-47464-155+1187Solanum tuberosum hin1-like protein mRNA, partial cds.
gb:AP005873_185942626681e-1088-6278-182+1214Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05.>gb:AP006851_1863108 Oryza sativa (
gb:AP005314_185044427657e-10100-61510-185+1218Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01.>gb:AP005567_1854166 Oryza sativa (
pir|D96587|D9658728634e-09205-61578-213+1239hypothetical protein F20D21.35 [imported] - Arabidopsis thaliana>gb:AE005173_893352 Arabidopsis thaliana chromosome 1, b
gb:AF370332_179221529621e-08199-63059-203+1223Arabidopsis thaliana putative harpin-induced protein (At5g06320) mRNA, partial cds.
gb:AB006700_150990130621e-08199-63067-211+1231Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHF15.>gb:BT000871_1635126 Arabidopsis thaliana clone C104930 p
gb:AY086125_157118231604e-08199-62788-230+1252Arabidopsis thaliana clone 21639 mRNA, complete sequence.
gb:AE005173_89422032595e-08199-62788-238+1260Arabidopsis thaliana chromosome 1, bottom arm complete sequence.>gb:AC007234_1535634 Genomic sequence for Arabidopsis th
gb:AP004674_184316633581e-07199-61540-177+1200Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05.
gb:AF264698_178187134582e-07199-57374-194+1240Arabidopsis thaliana NDR1/HIN1-Like protein 2 (NHL2) mRNA, complete cds.
gb:OSJN00083_169458735582e-07118-43258-169+1255Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence.
gb:AY448010S6_160659536573e-07199-57641-165+1181Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig SR6.
gb:OSJN00092_169476837566e-07199-63045-187+1205Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence.
gb:ATAC009918_154309638566e-07199-57374-194+1240Arabidopsis thaliana chromosome III BAC T19F11 genomic sequence, complete sequence.
gb:AF083702_176693339558e-07199-63067-210+1230Arabidopsis thaliana clone sps228 unknown mRNA.>gb:AF264699_1781872 Arabidopsis thaliana NDR1/HIN1-like protein 3 (NHL3)
pir|T02662|T0266240551e-06199-63045-187+1205hin1 protein homolog - rice>gb:AF039532_1763374 Oryza sativa harpin induced gene 1 homolog (Hin1) mRNA, complete cds.
gb:AB016877_151299641551e-06199-61584-230+1256Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MLF18.
gb:AP005066_184747742521e-05112-61541-225+1250Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05.>gb:AP005841_1858887 Oryza sativa (
pir|F85065|F8506543512e-05199-61565-202+1226hypothetical protein AT4g05220 [imported] - Arabidopsis thaliana>gb:ATCHRIV15_1544366 Arabidopsis thaliana DNA chromosom
gb:AB083029_152414244504e-05199-63336-185+1203Glycine max mRNA for syringolide-induced protein B13-1-9, complete cds.
pir|H84768|H8476845497e-05199-63073-217+1238hypothetical protein At2g35460 [imported] - Arabidopsis thaliana>gb:AC005314_1532573 Arabidopsis thaliana chromosome 2 c
pir|E84668|E8466846499e-0597-61553-235+1260hypothetical protein At2g27080 [imported] - Arabidopsis thaliana>gb:AC005623_1532856 Arabidopsis thaliana chromosome 2 c
gb:AP004637_184239547482e-04142-61559-216+1242Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0703C03.>gb:AP005493_1852820 Oryza sativa (
gb:AC136520_174324848473e-04199-61587-225+1291Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence.
gb:AP004139_183816349465e-04133-63315-182+1197Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07.>gb:AP005108_1847988 Oryza sativa
gb:AP003413_182909750466e-04199-624102-239+1291Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1151A10.
gb:BT002004_163560751450.001136-60912-171+1219Arabidopsis thaliana non-race specific disease resistance protein (NDR1) (At3g20600) mRNA, complete cds.>gb:BT006267_163
gb:AC136519_174324052450.001199-61587-227+1293Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007C23, complete sequence.
gb:AY577290_161597453450.001199-61571-208+1234Petunia integrifolia subsp. inflata clone Pi071603a unknown pollen protein mRNA, complete cds.
gb:AY735684_162572654430.004199-615118-256+1281Arabidopsis thaliana hypothetical protein AT5G21130 mRNA, complete cds.>gb:AC140977_1744077 Arabidopsis thaliana chromos
gb:AP005829_185862555430.005142-61527-184+1210Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1008E06.
gb:AP003270_182685156420.007199-61860-202+1224Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12.>gb:AP003611_1831349 Oryza sativa (
gb:AP000410_182002457420.007136-43812-120+1255Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K10D20.
gb:AY059166_156452958420.007208-44466-151+1231Arabidopsis thaliana At2g01080/F23H14.5 mRNA, complete cds.>gb:AF378858_1793443 Arabidopsis thaliana At2g01080/F23H14.5
gb:AC006837_153462559420.007208-44466-151+1231Arabidopsis thaliana chromosome 2 BAC F23H14 genomic sequence, complete sequence.
gb:AB020744_151459060420.007199-61539-176+1198Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9E15.>gb:AY800650_1628598 Arabidopsis thaliana clone H0000001
pir|D84420|D8442061420.007208-44466-151+1220hypothetical protein At2g01080 [imported] - Arabidopsis thaliana
gb:AY775036_118001162420.009301-6155-109+1134Nicotiana tabacum Avr9/Cf-9 rapidly elicited protein 76 (ACRE76) mRNA, partial cds.
pir|T08453|T0845363420.009199-357128-179+1300hypothetical protein F22O6.160 - Arabidopsis thaliana>gb:ATF22O6_1549703 Arabidopsis thaliana DNA chromosome 3, BAC clon
pir|D96643|D9664364420.011199-61563-200+1224hypothetical protein T13M11.12 [imported] - Arabidopsis thaliana>gb:AE005173_893846 Arabidopsis thaliana chromosome 1, b
gb:AF325013_178646765410.019199-61585-229+1265Arabidopsis thaliana At1g17620 (At1g17620/F11A6_23) mRNA, complete cds.
gb:AC022492_153906166410.019199-61584-228+1264Genomic sequence for Arabidopsis thaliana BAC F1L3 from chromosome I, complete sequence.>gb:AY052685_1562845 Arabidopsis
gb:AY085665_157073367390.09582-39031-141+1235Arabidopsis thaliana clone 1678 mRNA, complete sequence.
pir|T47579|T4757968390.09582-39031-141+1235hypothetical protein F24B22.160 - Arabidopsis thaliana>gb:ATF24B22_1549829 Arabidopsis thaliana DNA chromosome 3, BAC cl
gb:AB026295_151694869380.12199-627153-302+1322Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10.
gb:AP005605_185474770370.21205-615151-286+1311Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1449_C01.>gb:AP005847_1859015 Oryza sativa
gb:AC084110_173334771370.21229-4359-76+1416Arabidopsis thaliana chromosome 1 BAC F27G20 genomic sequence, complete sequence.
pir|C86447|C8644772370.21229-4359-76+1448F5D14.3 protein - Arabidopsis thaliana>gb:AE005172_892064 Arabidopsis thaliana chromosome 1, top arm complete sequence.>
pir|H84670|H8467073370.21199-62778-209+1231hypothetical protein At2g27270 [imported] - Arabidopsis thaliana>gb:AC006233_1533784 Arabidopsis thaliana chromosome 2 c
gb:AB020746_151462974370.28262-627159-281+1298Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MOB24.
gb:AC092557_173547675370.36199-61840-182+1212Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence.
gb:AP003247_182620976351.1106-44495-226+1312Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02.>gb:AP003570_1831012 Oryza sativa (
gb:BT012175_164138277342.3208-43865-141+1219Arabidopsis thaliana At4g26490 gene, complete cds.
pir|T05055|T0505578342.3208-43846-122+1200hypothetical protein M3E9.80 - Arabidopsis thaliana>gb:ATCHRIV65_1546530 Arabidopsis thaliana DNA chromosome 4, contig f
gb:AP002537_182250379333.1199-41182-149+1288Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0001B06.>gb:AP003417_1829191 Oryza sativa (
pir|H69086|H6908680333.1436-62490-166-1561ABC transporter - Methanobacterium thermoautotrophicum (strain Delta H)>gb:AE000923_29314 Methanobacterium thermoautotr
pir|S24213|S2421381333.1325-54045-118+1308reaction center protein chain M - Rhodobacter sphaeroides>gb:RSPUFM_168221 R.sphaeroides Y pufM gene for polypeptide M o
pir|T50761|T5076182333.1325-54045-118+1308reaction center protein chain M [imported] - Rhodobacter sphaeroides>gb:AF195122_487209 Rhodobacter sphaeroides photosyn
pir|A03456|WNRFMS83333.1325-54045-118+1308reaction center protein chain M - Rhodobacter sphaeroides>gb:RCARCM_162566 R.sphaeroides reaction center protein m subun
sp|P02953|RCEM_RHOSH84333.1325-54044-117+1307Reaction center protein M chain (Photosynthetic reaction center M subunit).
gb:SME591791_18656885334.0379-62193-173-1364Sinorhizobium meliloti 1021 complete chromosome; segment 10/12.
gb:AK048638_116845286335.2466-606233-282-1973Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130091B14 product:protocadherin 8, ful
gb:AB062783_869087335.2325-54045-118+1292Rhodobacter azotoformans pufL, pufM genes for photoreaction center L subunit, photoreaction center M subunit, partial cd
gb:XLA318531_258255488326.8438-55489-127-2543Xenopus laevis mRNA for papillary renal cell carcinoma protein (prcc gene).
gb:BC036025_198180289326.8436-606233-293-11070Homo sapiens protocadherin 8, transcript variant 1, mRNA (cDNA clone MGC:33061 IMAGE:5278690), complete cds.
gb:AY013873_193429290326.8436-606233-293-1973Homo sapiens protocadherin ARCADLIN (PCDH8) mRNA, complete cds, alternatively spliced.
gb:AL139085_192022991326.8436-606233-293-1973Human DNA sequence from clone RP11-431O22 on chromosome 13 Contains the 5' end of the gene for chondromodulin I precurso
gb:AP003545_183069792326.8367-6304-91-1132Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0613F06.
gb:AF360140_179109693326.8424-59192-147+1408Arabidopsis thaliana putative pectate lyase (At4g24780) mRNA, complete cds.
gb:ATU83621_155733194326.8424-59120-75+1226Arabidopsis thaliana putative pectate lyase (A10) gene, partial cds.
pir|T05556|T0555695326.8424-59190-145+1404pectate lyase (EC 4.2.2.2) F22K18.20 - Arabidopsis thaliana>gb:ATCHRIV62_1546361 Arabidopsis thaliana DNA chromosome 4,
sp|Q9C5M8|PL18_ARATH96326.8424-59192-147+1408Probable pectate lyase 18 precursor (EC 4.2.2.2) (Pectate lyase A10).>gb:BT020489_1642883 Arabidopsis thaliana At4g24780
sp|O95206|PCH8_HUMAN97326.8436-606233-293-11070Protocadherin 8 precursor (Arcadlin).>gb:AF061573_1879901 Homo sapiens protocadherin (PCDH8) mRNA, complete cds.>gb:AL13
gb:BC053008_210138098328.9466-606233-282-11070Mus musculus protocadherin 8, mRNA (cDNA clone MGC:62192 IMAGE:5698009), complete cds.
gb:AF231125_206004399328.9466-606234-283-11071Mus musculus paraxial protocadherin (Papc) mRNA, complete cds.
gb:AB026154_2044404100328.9466-606233-282-1972Rattus norvegicus mRNA for arcadlin, complete cds.
gb:AP004728_1843870101328.9370-59753-127-1147Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0583E12.
gb:AK117294_1815335102328.9103-34844-134+1252Arabidopsis thaliana At2g46300 mRNA for unknown protein, complete cds, clone: RAFL16-85-D11.
gb:BX572099_798705103328.9231-392121-176-2613Prochlorococcus marinus MIT9313 complete genome; segment 5/7.
gb:REU80928_163422104328.9433-546243-280-1823Rhizobium etli strain CFN42 symbiotic plasmid p42d, complete sequence.
pir|B84901|B84901105328.9103-34844-134+1254hypothetical protein At2g46300 [imported] - Arabidopsis thaliana>gb:AC005397_1532645 Arabidopsis thaliana chromosome 2 c
pir|A95938|A95938106328.9388-624298-387-1415probable glycosyltransferase protein redB [imported] - Sinorhizobium meliloti (strain 1021) magaplasmid pSymB>gb:RME5919