Clone JMFN041H06 [sequences]

previous contigF:001978 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:BT004174_163727211823e-4541-5981-188+2188Arabidopsis thaliana clone RAFL15-47-C07 (R20936) unknown protein (At3g13720) mRNA, complete cds.>gb:BT004952_1637898 Ar
gb:AY088623_157363921823e-4541-5981-188+2188Arabidopsis thaliana clone 8544 mRNA, complete sequence.
pir|F96593|F9659331817e-4541-5981-189+2189hypothetical protein F7A10.20 [imported] - Arabidopsis thaliana>gb:AE005173_893402 Arabidopsis thaliana chromosome 1, bo
gb:AP001307_182110841671e-4041-5981-188+2188Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MMM17.
gb:AP003244_182611851463e-3441-5501-187+2192Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0419B01.
gb:AC130732_174095861463e-3441-5951-192+2193Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence.
pir|H86311|H8631171372e-3141-5681-178+2180F11A6.4 protein - Arabidopsis thaliana>gb:AE005172_890736 Arabidopsis thaliana chromosome 1, top arm complete sequence.>
pir|T00733|T0073381224e-2753-59817-205+2209hypothetical protein F22O13.28 - Arabidopsis thaliana>gb:AE005172_889883 Arabidopsis thaliana chromosome 1, top arm comp
gb:AY088496_157351591194e-26101-59834-204+2209Arabidopsis thaliana clone 7188 mRNA, complete sequence.
gb:AY054569_1563223101163e-2595-59829-204+2209Arabidopsis thaliana putative protein (At3g56110; F18O21_70) mRNA, complete cds.>gb:AY064659_1566106 Arabidopsis thalian
pir|T47728|T47728111163e-2595-59829-204+2209hypothetical protein F18O21.70 - Arabidopsis thaliana>gb:ATF18O21_1549201 Arabidopsis thaliana DNA chromosome 3, BAC clo
gb:AC096855_1736363121111e-232-56259-242+2265Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence.
gb:ATH249727_1552141131111e-2374-58924-203+2216Arabidopsis thaliana mRNA for prenylated Rab receptor 2 (pra2 gene).
gb:AB010692_1511111141111e-2374-58925-204+2217Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18I23.>gb:AK175650_1817638 Arabidopsis thaliana mRNA for puta
gb:AK175728_1817716151093e-2395-5622-159+2184Arabidopsis thaliana mRNA, partial cds, clone: RAFL22-27-E17.
pir|G84828|G84828161093e-2395-56231-188+2213hypothetical protein At2g40380 [imported] - Arabidopsis thaliana>gb:AC007020_1535044 Arabidopsis thaliana chromosome 2 c
gb:AY789531_1628462171071e-2238-56216-200+2220Oryza sativa (indica cultivar-group) prenylated Rab acceptor protein 1 (Pra1) mRNA, complete cds.
gb:AC135924_1742864181072e-2238-56216-200+2220Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence.
pir|T02509|T02509191041e-2195-58939-211+2220hypothetical protein At2g38360 [imported] - Arabidopsis thaliana>gb:AC004683_1532055 Arabidopsis thaliana chromosome 2 c
pir|T09929|T09929201002e-2074-47594-227+2272hypothetical protein T16L4.170 - Arabidopsis thaliana>gb:ATCHRIV71_1546887 Arabidopsis thaliana DNA chromosome 4, contig
gb:AC093713_173610021996e-2068-55048-209+2230Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence.
gb:AE005173_89344722941e-1859-55310-175+2187Arabidopsis thaliana chromosome 1, bottom arm complete sequence.>gb:AC002328_1530237 Genomic sequence for Arabidopsis th
pir|T48482|T4848223942e-1898-59830-204+2216hypothetical protein T28J14.50 - Arabidopsis thaliana>gb:AB010697_1511213 Arabidopsis thaliana genomic DNA, chromosome 5
pir|T48185|T4818524943e-1895-62839-212+2223hypothetical protein F7A7.160 - Arabidopsis thaliana>gb:ATF7A7_1550916 Arabidopsis thaliana DNA chromosome 5, BAC clone
gb:AB023029_151531325921e-1747-5539-173+2186Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K24C1.
gb:AY086858_157190026912e-1792-5504-156+2182Arabidopsis thaliana clone 28606 mRNA, complete sequence.
pir|A86174|A8617427912e-1792-5504-156+2182hypothetical protein [imported] - Arabidopsis thaliana>gb:AE005172_889443 Arabidopsis thaliana chromosome 1, top arm com
gb:CR382139_167269628497e-0547-4274-132+2175Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii.
gb:AY190942_130881129474e-0456-57121-183+2186Drosophila pseudoobscura clone DPSF01_33_N22 (D1412) genomic sequence.
gb:SCYNL044W_171363330450.00186-37318-113+2176S.cerevisiae chromosome XIV reading frame ORF YNL044w.
gb:CNS07EG9_137290131450.001110-44812-120+2156chromosome II of strain GB-M1 of Encephalitozoon cuniculi (Microspora).
sp|P53633|YIPC_YEAST32440.00286-37318-113+2176YIP3 protein.>gb:SCYIP3GEN_1712556 S.cerevisiae YIP3 gene.>gb:SCYIP3PRT_1712557 S.cerevisiae mRNA for YIP3 protein.
gb:AE017352_175991133440.00389-4421-122+2163Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence.
gb:AY190939_130878734440.003143-57150-190+2193Drosophila erecta clone DERF01_42_I03 (D1420) genomic sequence.
gb:AE013599_113096335440.003143-57150-190+2193Drosophila melanogaster chromosome 2R, complete sequence.>gb:AE003831_1226716 Drosophila melanogaster chromosome 2R, sec
pir|S61100|S6110036440.00389-3731-95+2158probable membrane protein YNL044w - yeast (Saccharomyces cerevisiae)>gb:SC128LXIV_1704974 S.cerevisiae 12.8 kb DNA from
gb:AP005895_185981637430.004122-3344-71+271Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018L13.
gb:AC136520_174325838430.005380-55942-100-2245Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence.
pir|T02258|T0225839420.011172-462255-350+1407globulin1 - maize>gb:ZMU28017_1732115 Zea mays truncated globulin1 (Glb1) gene, Glb1-Hb allele, complete cds.
gb:CR382126_165852140400.02665-25011-72+2176Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:AE017341_175443641400.033155-44827-124+2163Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence.
gb:CR380953_165067842400.03368-25012-72+2176Candida glabrata strain CBS138 chromosome G complete sequence.
gb:BA000040_72840643400.04479-402368-483+1530Bradyrhizobium japonicum USDA 110 DNA, complete genome.
gb:AF452375_51235044390.05773-471223-349+1580Rhodococcus sp. I24 cosmid 3H1, partial sequence.
gb:AF365406_179161245390.074143-4273-98+2141Candida albicans YIP3-like protein (YIP3) gene, partial cds; and ribosomal protein L39 (RPL39), ribosomal protein S22 (R
gb:AP003075_182461946380.13226-35788-136+1164Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468H06.
gb:AE016817_174715247380.13119-35529-93+2176Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence.
gb:D89158_167527648380.17155-47235-140+2172Schizosaccharomyces pombe mRNA, partial cds, clone: SY 0644.
pir|T42519|T4251949380.17155-47235-140+2172conserved hypothetical protein - fission yeast (Schizosaccharomyces pombe) (fragment)
sp|Q9UUN5|YJF2_SCHPO50380.17155-47234-139+2171Hypothetical protein C306.02c in chromosome III.>pir|T41280|T41280 hypothetical protein SPCC306.02c - fission yeast (Sc
gb:BT019963_215162351370.2235-39414-127+2186Synthetic construct Homo sapiens Rab acceptor 1 (prenylated) mRNA, partial cds.
gb:HSA133534_200037852370.2235-39414-127+2185Homo sapiens mRNA for prenylated Rab acceptor 1.
gb:AF112202_188436253370.2235-39414-127+2185Homo sapiens prenylated rab acceptor 1 mRNA, complete cds.>gb:BC008950_1971715 Homo sapiens Rab acceptor 1 (prenylated),
gb:AP004136_183813054370.22142-495135-242+1334Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1287_H05.
gb:CFA534245_143856655370.2232-34913-111+2185Canis familiaris mRNA for prenylated Rab acceptor 1 (pra1 gene).
gb:AF112996_188441456370.2835-39413-126+2184Homo sapiens prenylated RAB acceptor 1 mRNA, complete cds.
gb:AF025506_205128357370.3735-39414-127+2185Rattus norvegicus prenylated rab acceptor 1 (PRA1) mRNA, complete cds.>gb:BC086387_2109576 Rattus norvegicus Rab accepto
pir|JC7369|JC736958370.3735-39414-127+2185prenylated Rab acceptor - mouse>gb:AK008559_1154649 Mus musculus adult male small intestine cDNA, RIKEN full-length enri
gb:BC068737_255523859360.48101-38532-127+2187Xenopus laevis hypothetical protein MGC81207, mRNA (cDNA clone MGC:81207 IMAGE:6318581), complete cds.
gb:BC082682_256282760360.6362-38526-127+2187Xenopus laevis hypothetical LOC494691, mRNA (cDNA clone MGC:85326 IMAGE:6875892), complete cds.
pir|S06705|S0670561360.63133-3842-82+1223hypothetical HTLV-1 related endogenous sequence HRES1 25K - human>gb:HTLV1RES_2028654 Human HTLV-I related endogenous re
gb:BC058972_210354862350.82100-29445-108+1478Mus musculus RIKEN cDNA 5330439J01 gene, mRNA (cDNA clone MGC:67221 IMAGE:5698469), complete cds.
gb:BC057055_210256363350.82100-294369-432+1736Mus musculus RIKEN cDNA 5330439J01 gene, mRNA (cDNA clone MGC:67344 IMAGE:5717322), complete cds.
gb:AP003514_183020864350.82103-366471-571+1777Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06.>gb:AP004738_1844102 Oryza sativa (
gb:AK035990_116431565350.82169-30340-81+1252Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630025C22 product:hypothetical
gb:BA000035_71569066350.8297-444303-416+1483Corynebacterium efficiens YS-314 DNA, complete genome.
gb:HS283E3_199786267351.4250-363107-147+1334Human DNA sequence from clone RP1-283E3 on chromosome 1p36.21-36.33 Contains the MMP23B gene for matrix metalloproteinas
gb:AB010962_186423268351.4250-363159-199+1386Homo sapiens mRNA for MIFR-2, complete cds.
gb:AF187965_124918569351.4181-471212-304+1399Caenorhabditis remanei alternatively spliced TRA-2A and TRA-2B (tra-2) gene, complete cds.
gb:AF187965_124918470351.4181-4711298-1390+11485Caenorhabditis remanei alternatively spliced TRA-2A and TRA-2B (tra-2) gene, complete cds.
gb:AP004750_184434571341.876-36321-133+1229Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0421H01.
gb:AP001550_182129772341.8226-35788-136+1164Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01.>gb:AP001859_1821443 Oryza sativa (
gb:AK080627_117301773341.8166-4178-93+1222Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830030H10 product:hypothetical prot
gb:BA000030_69942474341.8262-492269-345+1719Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
gb:AP006618_55706575341.8130-444341-443+1518Nocardia farcinica IFM 10152 DNA, complete genome.
pir|T03785|T0378576341.8106-37863-165+1355L-lactate dehydrogenase (EC 1.1.1.27) - rice>gb:RICLT36RGL_1703643 Oryza sativa (japonica cultivar-group) gene for lacta
gb:AY084728_156981477342.4134-52699-230+2241Arabidopsis thaliana clone 115976 mRNA, complete sequence.
gb:AE014187_93878178342.4371-5081023-1068-25561Plasmodium falciparum 3D7 chromosome 14 complete sequence.>gb:AE014821_1227857 Plasmodium falciparum 3D7 chromosome 14 s
gb:AF451975_206599079333.1226-486809-906+11430Rattus norvegicus cask-interacting protein 1 (Caskin1) mRNA, complete cds.
gb:AB093272_204805780333.1226-3571239-1279+11582Mus musculus mRNA for mKIAA0910 protein.
gb:AP004041_183675781333.131-38751-180+1188Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1115_A07.
gb:AC152973_174523482333.1121-381148-233+1255Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0076M01, complete sequence.
gb:AY604200_161747183333.1187-330356-404+1457Thermoascus aurantiacus Cre1 (Cre1) gene, complete cds.
gb:AX875869_147628184333.1100-29428-91+1268Sequence 10774 from Patent EP1074617.>gb:AK001021_1908216 Homo sapiens cDNA FLJ10159 fis, clone HEMBA1003528.
gb:AX207613_146408685333.1223-33970-107+1489Sequence 1 from Patent WO0157080.
sp|Q8CHC4|SYJ1_MOUSE86333.1226-3571231-1271+11574Synaptojanin 1 (EC 3.1.3.36) (Synaptic inositol-1,4,5-trisphosphate 5- phosphatase 1).
gb:AY186194_230708087334.1175-49245-153+1244Rhesus cytomegalovirus strain 68-1, complete genome.
gb:AF451977_190248388335.3226-354808-849+11431Homo sapiens cask-interacting protein 1 (CASKIN1) mRNA, complete cds.
gb:AB037727_186651889335.3226-354531-572+11154Homo sapiens mRNA for KIAA1306 protein, partial cds.
gb:AP004401_184122490335.3163-37227-95+1257Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03.
gb:AP003727_183253991335.379-465136-267+1832Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08.
gb:AY568670_117865092335.3199-360163-213+1364Arabidopsis thaliana basic helix-loop-helix family protein (At5g53210) mRNA, complete cds.>gb:AJ630498_1812757 Arabidops
gb:AE014298_112510293335.3377-5208-53-2530Drosophila melanogaster chromosome X, complete sequence.>gb:AE014298_1125103 Drosophila melanogaster chromosome X, compl
gb:AE016959_102385494335.3173-53842-166+2212Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence.>gb:AC084763_1733718 Oryza sativa chromosome 10
pir|T05859|T0585995335.3134-34999-173+2208hypothetical protein T29A15.30 - Arabidopsis thaliana>gb:ATCHRIV67_1546635 Arabidopsis thaliana DNA chromosome 4, contig
gb:GFL309022_240370596327.0127-357173-245+1309Grapevine fleck virus complete genome, isolate MT48, genomic RNA.
gb:AK026767_191070197327.0456-53060-83+3133Homo sapiens cDNA: FLJ23114 fis, clone LNG07880.
gb:AP003331_182805398327.0160-4627-99+1181Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088D01.>gb:AP003337_1828204 Oryza sativa (
gb:AC147802_174474399327.0109-333107-180+1183Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete sequence.
gb:SCO939107_174581100327.0190-3273-43+1165Streptomyces coelicolor A3(2) complete genome; segment 4/29.
sp|O18964|SYJ1_BOVIN101327.0226-4231219-1295+11324Synaptojanin 1 (EC 3.1.3.36) (Synaptic inositol-1,4,5-trisphosphate 5- phosphatase 1) (p150) (Fragment).
gb:BC070022_2555499102329.1196-297911-944+11187Danio rerio zgc:66101, mRNA (cDNA clone MGC:85904 IMAGE:6972195), complete cds.
gb:BC056316_2551756103329.1196-297913-946+11189Danio rerio zgc:66101, mRNA (cDNA clone MGC:66101 IMAGE:6799363), complete cds.
gb:AY391453_2531589104329.159-38527-129+2190Danio rerio Rab acceptor 1 (prenylated) (RABAC1) mRNA, complete cds.
gb:AP004650_1842645105329.149-49535-172+1240Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1540_G08.
gb:AP003743_1832734106329.1127-357386-458+1608Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_E12.>gb:AP005124_1848200 Oryza sativa
gb:AK017138_1159034107329.1103-375110-204+1216Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933440N22 product:hypothetical protein,
gb:BA000030_703840108329.14-333113-230+1400Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
gb:AP006618_558513109329.1133-342170-238+1277Nocardia farcinica IFM 10152 DNA, complete genome.
pir|T28682|T28682110329.1169-47482-190+1191hypothetical protein - Streptomyces coelicolor (fragment)
pir|B36036|B36036111329.1169-375178-238+1239cytochrome P450 2F1, truncated splice form - human