Clone JMFF051L10 [sequences]

previous contigF:000096 contigR:008653
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AP004669_184301241876e-47185-5201-112+21370.16323-4331025-1062-21068Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0491F11.
gb:AP003566_183093051876e-47185-5201-112+22370.16323-4331021-1058-21064Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008G24.
gb:AF286719_178321311892e-47185-5201-112+21020Arabidopsis thaliana XRN3 (XRN3) mRNA, complete cds.
gb:AY136383_158188421892e-47185-5201-112+2763Arabidopsis thaliana unknown protein (At1g75660) mRNA, complete cds.>gb:BT000175_1634453 Arabidopsis thaliana unknown pr
pir|D96786|D9678631892e-47185-5201-112+21037protein F10A5.15 [imported] - Arabidopsis thaliana>gb:AE005173_895102 Arabidopsis thaliana chromosome 1, bottom arm comp
gb:AF286720_178321461701e-41185-5201-114+21012Arabidopsis thaliana XRN2 (XRN2) mRNA, complete cds.>gb:AK176100_1818088 Arabidopsis thaliana mRNA, complete cds, clone:
gb:AY091687_157469871701e-41185-5201-114+2813Arabidopsis thaliana AT5g42540/K16E1_1 mRNA, complete cds.>gb:AF367296_1791748 Arabidopsis thaliana AT5g42540/K16E1_1 mR
gb:AB022210_151496981701e-41185-5201-114+2746Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K16E1.
gb:AC092076_173518491562e-37185-5201-113+2988Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence.
gb:AY064012_1565952101554e-37185-5201-113+2947Arabidopsis thaliana putative exonuclease (At1g54490) mRNA, complete cds.>gb:AY091411_1574611 Arabidopsis thaliana putat
pir|G96586|G96586111554e-37185-5201-113+2965hypothetical protein F20D21.30 [imported] - Arabidopsis thaliana>gb:AE005173_893347 Arabidopsis thaliana chromosome 1, b
gb:BX005124_2566974121515e-36185-5201-112+2517Zebrafish DNA sequence from clone CH211-284A16 in linkage group 20 Contains the 5' end of the xrn2 gene for 5'-3' exorib
gb:BC047182_2549846131515e-36185-5201-112+2540Danio rerio 5'-3' exoribonuclease 2, mRNA (cDNA clone MGC:55717 IMAGE:3816008), complete cds.
gb:AX887523_1482976141501e-35185-5201-112+2130Sequence 3386 from Patent EP1033401.
gb:AX877023_1476800151501e-35185-5201-112+2950Sequence 11928 from Patent EP1074617.
gb:CR861231_1185240161501e-35185-5201-112+2950Pongo pygmaeus mRNA; cDNA DKFZp459J063 (from clone DKFZp459J063).
sp|Q9H0D6|XRN2_HUMAN171501e-35185-5201-112+29505'-3' exoribonuclease 2 (EC 3.1.11.-).>gb:HSM801809_1186471 Homo sapiens mRNA; cDNA DKFZp434M182 (from clone DKFZp434M18
gb:BC086199_2564779181501e-35185-5201-112+2423Xenopus laevis hypothetical LOC495653, mRNA (cDNA clone IMAGE:7200695), partial cds.
gb:AK031247_1162361191501e-35185-5201-112+2952Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930437B06 product:5'-3' exoribonuc
pir|I49635|I49635201501e-35185-5201-112+2947mouse Dhm1 protein - mouse>gb:MUSDHM1P_2125668 Mouse mRNA for Dhm1 protein, complete cds.
sp|Q9DBR1|XRN2_MOUSE211501e-35185-5201-112+29515'-3' exoribonuclease 2 (EC 3.1.11.-) (Dhm1 protein).>gb:AK004800_1152604 Mus musculus adult male lung cDNA, RIKEN full-
gb:AJ720740_2502927221493e-35185-5201-112+2949Gallus gallus mRNA for hypothetical protein, clone 24h23.
gb:AF064257_1880351231493e-35185-5201-112+2950Homo sapiens Dhm1-like protein mRNA, complete cds.
pir|T27005|T27005241479e-35185-5201-112+2892hypothetical protein Y48B6A.3 - Caenorhabditis elegans>gb:CEY48B6A_1370244 Caenorhabditis elegans YAC Y48B6A, complete s
gb:AF152169_1886404251454e-34185-5201-112+2950Homo sapiens DHP protein mRNA, complete cds.
gb:AE014134_1127919261371e-31185-5201-113+2908Drosophila melanogaster chromosome 2L, complete sequence.>gb:AE003615_1218026 Drosophila melanogaster chromosome 2L, sec
gb:NCB7K22_1690203271309e-30185-5201-113+21072Neurospora crassa DNA linkage group II BAC clone B7K22.
gb:BX649607_1643500281278e-29185-5201-112+21058Aspergillus fumigatus BAC pilot project supercontig; segment 3/3.
sp|P40848|DHP1_SCHPO291246e-28185-5201-113+2991Protein dhp1.>pir|S43891|S43891 dna exoribonuclease Dhp1p - fission yeast (Schizosaccharomyces pombe)>gb:SPAC26A3_171745
gb:AE016820_1750257301222e-27185-5201-111+2945Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence.
gb:CR380958_1653508311223e-27185-5201-111+21018Candida glabrata strain CBS138 chromosome L complete sequence.
sp|Q02792|RAT1_YEAST321223e-27185-5201-111+21006Ribonucleic acid trafficking protein 1 (5'-3' exoribonuclease) (EC 3.1.11.-) (P116).>pir|S20126|S20126 exoribonuclease R
gb:CR382126_1658683331217e-27185-5201-111+2992Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:AE017346_1757332341193e-26185-5201-117+21127Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence.
gb:AP005820_1858431351132e-24185-5201-104+2822Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0091C16.
gb:CR382137_1670383361123e-24185-5201-108+21003Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii.
gb:CR382130_1662880371047e-22185-5201-112+21010Yarrowia lipolytica chromosome D of strain CLIB99 of Yarrowia lipolytica.
gb:AE017345_175696738971e-19185-5201-97+21457Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence.
sp|P40383|EXO2_SCHPO39971e-19185-5201-95+21328Exonuclease II (EC 3.1.11.-) (Exo II) (P140).>pir|S78457|S78457 exonuclease II - fission yeast (Schizosaccharomyces pomb
gb:CEY39G8C_136987740963e-19185-5201-95+21195Caenorhabditis elegans YAC Y39G8C, complete sequence.
pir|T26774|T2677441963e-19185-5201-95+21801hypothetical protein Y39G8C.b - Caenorhabditis elegans
gb:AK096177_191453042957e-19185-5201-95+2473Homo sapiens cDNA FLJ38858 fis, clone MESAN2011627, highly similar to 5'-3' exoribonuclease 1.
gb:CR382129_166224243941e-18185-5201-94+21526Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica.
gb:PFA929356_139331544941e-18185-5201-132+21311Plasmodium falciparum strain 3D7, chromosome 9; segment 2/5.
gb:HSM807042_201854045924e-18185-5201-95+21706Homo sapiens mRNA; cDNA DKFZp686L17106 (from clone DKFZp686L17106); complete cds.
gb:BC048104_198408246924e-18185-5201-95+2459Homo sapiens 5'-3' exoribonuclease 1, mRNA (cDNA clone IMAGE:4820049), complete cds.
gb:AY137776_193694847924e-18185-5201-95+21706Homo sapiens DNA strand-exchange protein SEP1 mRNA, complete cds.
gb:CR857966_118215948924e-18185-5201-95+2402Pongo pygmaeus mRNA; cDNA DKFZp469A0429 (from clone DKFZp469A0429).
gb:CR749518_118110549924e-18185-5201-95+21694Homo sapiens mRNA; cDNA DKFZp686B22225 (from clone DKFZp686B22225).
gb:CR627396_118077250924e-18185-5201-95+21694Homo sapiens mRNA; cDNA DKFZp686F19113 (from clone DKFZp686F19113).
pir|T30244|T3024451924e-18185-5201-95+21687phosphodiesterase I (EC 3.1.4.1) - mouse>gb:D88026_2112619 Mus musculus mRNA for Dhm2 protein, complete cds.
pir|T30175|T3017552924e-18185-5201-95+21706exoribonuclease, variant 2 - mouse>gb:MM53EXO_2113761 M.musculus mRNA for 5'-3' exonuclease.
pir|T30174|T3017453924e-18185-5201-95+21719exoribonuclease, variant 1 - mouse>gb:MM53EXO_2113760 M.musculus mRNA for 5'-3' exonuclease.
gb:DME242529_137898154926e-18185-5201-95+21613Drosophila melanogaster mRNA for pacman 5'-3' exoribonuclease.
gb:AE014298_112642455926e-18185-5201-95+21612Drosophila melanogaster chromosome X, complete sequence.>gb:AE003512_1213433 Drosophila melanogaster chromosome X, secti
gb:CR380958_165332656893e-17185-5201-96+21522Candida glabrata strain CBS138 chromosome L complete sequence.
gb:AC116979_120713957887e-17185-5201-94+21749Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4, complete sequence.
sp|P22147|KEM1_YEAST58871e-16185-5201-95+21528Strand exchange protein 1 (KAR(-) enhancing mutation protein) (5'-3' exoribonuclease) (DNA strand transfer protein beta)
pir|B90090|B9009059871e-16185-5201-91+2542very similar to mouse Dhm1 and Dhm2 [imported] - Guillardia theta nucleomorph>gb:AF165818_1773803 Guillardia theta nucle
gb:CR382126_165934460811e-14185-5201-95+21453Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:AE016817_174733861802e-14185-5201-95+21474Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence.
gb:BX538351_135885762763e-13185-5201-101+21572Cryptosporidium parvum chromosome 6, complete sequence; segment 2/4.
gb:AE014186_93804263702e-11188-52046-139+2743Plasmodium falciparum 3D7 chromosome 11 complete sequence.>gb:AE014837_1228776 Plasmodium falciparum 3D7 chromosome 11 s
gb:CNS07EGI_137446564693e-11185-5201-91+2655chromosome IX of strain GB-M1 of Encephalitozoon cuniculi (Microspora).
gb:CR382135_166836465527e-06413-5201-36+21378Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii.
gb:AC117075_120771266458e-04320-51723-88+2379Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence.
gb:AF303741_223144867410.012185-5141-98+2624Chilo iridescent virus complete genome.
gb:PFMAL4P2_13947243331.351-134336-363+31111Plasmodium falciparum MAL4P2.
gb:AP005179_18488784331.7341-43622-53-21052Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0084L07.>gb:AP005877_1859502 Oryza sat
gb:AF067613_12380205332.384-20615-55-1334Caenorhabditis elegans cosmid F56D6, complete sequence.
pir|B43306|B4330669331.9344-445100-133-3370probable hydro-lyase (EC 4.2.1.-) dnrJ - Streptomyces peucetius
sp|P25048|DNRJ_STRPE70331.9344-445100-133-3370Daunorubicin biosynthesis sensory transduction protein dnrJ.>gb:STMDNRI_192841 S.peucetius DnrI and DnrJ genes, complete
gb:AY673996_162151771325.769-14937-62+376Gracilaria tenuistipitata var. liui chloroplast, complete genome.
gb:CR628337_11362772325.7143-2237-33+2339Legionella pneumophila str. Lens complete genome.
gb:AE017354_45877373327.4143-22320-46+2352Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome.
gb:AB113357_14107146316.6326-439780-816-2925Sus scrofa 433 kb genomic segment, located between the non-classical and classical SLA class I gene cluster, clone: BAC
gb:AB128049_18739747318.6326-439778-816-2940Macaca mulatta genes, MHC class I region, partial and complete cds.
gb:AB088097_18721088318.6326-439777-815-2940Homo sapiens FB19 gene for protein phosphatase 1, regulatory subunit 10, complete cds.>gb:AL662800_1931469 Human DNA seq
gb:CNS07EGI_13744199318.6111-314266-333-1417chromosome IX of strain GB-M1 of Encephalitozoon cuniculi (Microspora).
gb:AB006570_119304010318.6208-426961-1031-31193Ephydatia fluviatilis EfPTK178 mRNA for protein tyrosine kinase, complete cds.
pir|JE0291|JE029111318.6326-439777-815-2940FB19 protein - human>gb:HSFB19_2013170 Homo sapiens fb19 mRNA.
pir|A39724|A3972412318.6314-43628-73-2320homeotic protein Hox A4 - human>gb:HUMHOX14_2032126 Human homeobox 1.4 protein mRNA, complete cds.
sp|Q00056|HXA4_HUMAN13318.6314-43628-73-2320Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4).
gb:AB062788_119704968231.8371-397259-267+2634Babesia equi Be82 mRNA for protein 82, partial cds.