Clone JMFF049C24 [sequences]

previous contigF:007362 contigR:010256
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
sp|O22607|MSI4_ARATH52032e-51191-61037-175+221131e-24268-456444-506-2507WD-40 repeat protein MSI4.>pir|G84577|G84577 probable WD-40 repeat protein, MSI4 [imported] - Arabidopsis thaliana>gb:AY
gb:AC005917_153319682023e-51281-61016-125+211131e-24268-456394-456-2457Arabidopsis thaliana chromosome 2 clone F3P11 map CIC06E08, complete sequence.
gb:AF384037_179414612041e-51281-61013-122+261108e-24265-456390-453-2453Zea mays nucleosome/chromatin assembly factor C (nfc102) mRNA, complete cds.
gb:AF250047_178084722041e-51281-61013-122+271108e-24265-456390-453-2453Zea mays WD-repeat protein RBAP1 (rbap1) mRNA, complete cds.
gb:AF028711_176236672023e-51281-61016-125+231122e-24268-456394-456-2457Arabidopsis thaliana WD-40 repeat protein MSI4 (MSI4) mRNA, complete cds.
gb:AP002901_182373562032e-51281-61012-121+241106e-24265-456390-453-2453Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456F08.
gb:AY100481_157694432041e-51281-61013-122+2171075e-23265-456390-453-2453Zea mays nucleosome/chromatin assembly factor group C (nfc101) mRNA, complete cds.
gb:AX076396_146065042041e-51281-61013-122+2181075e-23265-456390-453-2453Sequence 3 from Patent WO0104285.
gb:SLA310656_1715246101983e-50281-61017-126+2121101e-23271-456402-463-2473Silene latifolia partial wdr1x gene for putative WD-repeat protein exons 1-15.
gb:AJ631218_1812777141983e-50281-6108-117+291101e-23271-456393-454-2458Silene dioica partial mRNA for putative WD repeat protein.>gb:AJ631219_1812778 Silene dioica partial mRNA for putative W
gb:SLA18519_1715241111983e-50281-61016-125+2131101e-23271-456401-462-2472Silene latifolia mRNA for X1 protein.
gb:AJ631222_1812781151961e-49281-6108-117+281101e-23271-456393-454-2458Silene noctiflora partial mRNA for putative WD repeat protein.
gb:AJ631221_1812780131983e-50281-6108-117+2161075e-23271-456393-454-2458Silene diclinis partial mRNA for putative WD repeat protein.
gb:SLA18517_1715239121983e-50281-61016-125+2191077e-23271-456401-462-2472Silene latifolia mRNA for Y1 protein.
pir|T09936|T09936171549e-37281-61056-164+2211052e-22265-456433-496-2496hypothetical protein T16L4.240 - Arabidopsis thaliana>gb:ATCHRIV71_1546894 Arabidopsis thaliana DNA chromosome 4, contig
gb:BT010610_1640556181493e-35281-61056-155+2201052e-22265-456424-487-2487Arabidopsis thaliana At4g29730 gene, complete cds.>gb:AK176425_1818413 Arabidopsis thaliana mRNA for WD-40 repeat-like p
gb:SLA18518_1715240191367e-32368-6101-81+2151091e-23271-456357-418-2428Silene latifolia Y1 gene.
gb:SLA310655_1715245201322e-30368-6101-82+2141091e-23271-456358-419-2429Silene latifolia partial wdr1y gene for putative WD-repeat protein exons 2-15.
gb:AF250048_178084892025e-51281-61013-122+2182Zea mays WD-repeat protein RBAP2 (rbap2) gene, partial cds.
gb:AF250049_1780849161686e-41281-6101-110+2168Zea mays WD-repeat protein RBAP3 (rbap3) mRNA, partial cds.
gb:AF519100_180779551108e-24271-45615-76-286Silene vulgaris isolate VLG22 Sv1 protein gene, partial cds.>gb:AF519101_1807796 Silene vulgaris isolate VLG15 Sv1 prote
gb:AF519045_1807793101101e-23271-45615-76-286Silene latifolia isolate LAT36 SlX1 protein gene, partial cds.
gb:AF519038_1807786111101e-23271-45615-76-286Silene latifolia isolate LAT20 SlX1 protein gene, partial cds.>gb:AF519039_1807787 Silene latifolia isolate LAT21 SlX1 p
gb:AY088045_157306928611e-08281-61916-130+223453e-04319-456366-404-2415Arabidopsis thaliana clone 40637 mRNA, complete sequence.
sp|O22468|MSI2_ARATH29611e-08281-61916-130+224453e-04319-456366-404-2415WD-40 repeat protein MSI2.>pir|B84544|B84544 probable WD-40 repeat protein, MSI2 [imported] - Arabidopsis thaliana>gb:AC
sp|O22467|MSI1_ARATH25635e-09281-61019-136+244400.018310-456377-418-2424WD-40 repeat protein MSI1.>gb:CQ887959_1454884 Sequence 37 from Patent WO2004085644.>gb:AB019228_1514097 Arabidopsis tha
sp|O22466|MSI1_LYCES21651e-09281-61019-136+258380.070322-456377-414-2424WD-40 repeat protein MSI1.>pir|T04324|T04324 G1/S transition control protein-binding protein MSI1 - tomato>gb:AF016845_1
gb:AF440219_180005026621e-08281-61025-142+256380.070322-456383-420-2431Zea mays cultivar B73 MSI type nucleosome/chromatin assembly factor C (nfc103) mRNA, complete cds.
gb:AX076394_146064927621e-08281-61025-142+257380.070322-456383-420-2431Sequence 1 from Patent WO0104285.
gb:BC052110_255045932599e-08281-61018-135+240400.011325-456377-413-2426Danio rerio retinoblastoma binding protein 4, like, mRNA (cDNA clone MGC:56477 IMAGE:5776911), complete cds.
gb:BC042283_254810339572e-07281-61018-134+231410.008325-456376-412-2425Xenopus laevis retinoblastoma binding protein 7, mRNA (cDNA clone MGC:53418 IMAGE:5571746), complete cds.
gb:BC067546_255472433581e-07281-61018-135+239400.011325-456377-413-2448Danio rerio retinoblastoma binding protein 4, like, mRNA (cDNA clone MGC:85617 IMAGE:6524543), complete cds.
gb:AF016848_176151650566e-07281-61917-131+227420.004322-456367-404-2424Arabidopsis thaliana WD-40 repeat protein (MSI3) mRNA, complete cds.
gb:BC064219_255377247573e-07281-61018-134+230410.008325-456376-412-2425Xenopus tropicalis hypothetical protein MGC76124, mRNA (cDNA clone MGC:76124 IMAGE:5309101), complete cds.
sp|O22469|MSI3_ARATH51566e-07281-61917-131+229420.004322-456367-404-2424WD-40 repeat protein MSI3.>pir|T05775|T05775 G1/S transition control protein-binding protein MSI3 - Arabidopsis thaliana
gb:AF374376_118815531603e-08281-61024-138+260370.12322-456380-417-2426Oikopleura dioica clone BAC clone 001, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces.
gb:BC088588_256571835572e-07281-61019-135+246390.024325-456377-413-2425Xenopus tropicalis hypothetical LOC496866, mRNA (cDNA clone MGC:97809 IMAGE:6991409), complete cds.
gb:BC072311_255656236572e-07281-61019-135+248390.024325-456377-413-2425Xenopus laevis hypothetical protein MGC82618, mRNA (cDNA clone MGC:82618 IMAGE:5047944), complete cds.
gb:BC063984_255368437572e-07281-61019-135+249390.024325-456377-413-2424Danio rerio retinoblastoma binding protein 4, mRNA (cDNA clone MGC:77854 IMAGE:7002322), complete cds.
pir|T23391|T2339149565e-07281-61016-131+241400.011322-456369-406-2417hypothetical protein K07A1.12 - Caenorhabditis elegans>gb:AF116530_1242527 Caenorhabditis elegans synthetic multivulva p
gb:AY394940_253168340572e-07281-61019-135+250390.024325-456377-413-2424Danio rerio clone RK046A1D12 retinoblastoma binding protein 4 mRNA, complete cds.
sp|Q60972|RBB4_MOUSE44572e-07281-61019-135+253390.024325-456377-413-2461Chromatin assembly factor 1 subunit C (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit)
sp|Q09028|RBB4_HUMAN45572e-07281-61019-135+254390.024325-456377-413-2425Chromatin assembly factor 1 subunit C (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit)
gb:BT002870_163646158534e-06281-61917-131+228420.004322-456367-404-2424Arabidopsis thaliana clone RAFL14-87-D13 (R20340) putative WD-40 repeat protein (MSI3) (At4g35050) mRNA, complete cds.
sp|Q24572|CAF1_DROME56551e-06281-61023-139+245400.018325-456381-417-2430Chromatin assembly factor 1 P55 subunit (CAF-1 P55 subunit) (dCAF-1) (Nucleosome remodeling factor 55 kDa subunit) (NURF
gb:BC045315_254915938572e-07281-61019-135+259370.12325-456377-413-2424Danio rerio retinoblastoma binding protein 4, mRNA (cDNA clone MGC:55349 IMAGE:2601332), complete cds.
gb:AE017347_175792024634e-09281-61027-148+274318.5310-456390-431-2435Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence.
gb:AF073787_247172153551e-06281-61019-135+251390.024325-456377-413-2425Xenopus laevis retinoblastoma A associated protein mRNA, complete cds.
gb:AL929302_193324959529e-06281-61062-178+233410.008325-456420-456-2469Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open
gb:AL929302_193324860529e-06281-61013-129+234410.008325-456371-407-2420Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open
gb:AY082378_156917872434e-04551-6101-20+222501e-05379-456296-321-2321Silene conica SlX1-like protein mRNA, partial cds.
gb:AY093418_157534830602e-08281-6102-107+265332.2337-456341-373-2382Zea mays nucleosome/chromatin assembly factor 104 (nfc104) mRNA, complete cds.
gb:CR860642_118470161529e-06281-61018-134+235410.008325-456377-413-2426Pongo pygmaeus mRNA; cDNA DKFZp459K2224 (from clone DKFZp459K2224).
gb:AK078349_117228262529e-06281-61018-134+236410.008325-456376-412-2425Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:6530404A07 product:hypothetical
sp|Q60973|RBB7_MOUSE63529e-06281-61018-134+237410.008325-456376-412-2425Histone acetyltransferase type B subunit 2 (Retinoblastoma binding protein p46) (Retinoblastoma-binding protein 7) (RBBP
sp|Q16576|RBB7_HUMAN64529e-06281-61018-134+238410.008325-456376-412-2425Histone acetyltransferase type B subunit 2 (Retinoblastoma binding protein P46) (Retinoblastoma-binding protein 7) (RBBP
gb:BC077257_255997357542e-06281-61019-135+247390.024325-456377-413-2425Xenopus laevis retinoblastoma A associated protein, mRNA (cDNA clone MGC:79922 IMAGE:4968802), complete cds.
gb:CQ887961_145488543572e-07281-61019-135+261360.26325-456377-413-2425Sequence 39 from Patent WO2004085644.>gb:AF097750_2473289 Gallus gallus chromatin assembly factor 1 p48 subunit mRNA, co
gb:AF279275_248401867504e-05281-61018-133+225420.003304-456375-420-2424Gallus gallus Rbap46 polypeptide mRNA, complete cds.
pir|JC7558|JC755868504e-05281-61018-133+226420.003304-456375-420-2424chromatin assembly factor-1 p48 subunit homolog, p46 - chicken
gb:HSIEF9306_201437141572e-07281-61019-135+262340.77352-456377-404-2410H.sapiens IEF 9306 mRNA.
gb:CR857269_118151352558e-07281-61019-135+263340.77352-456377-404-2463Pongo pygmaeus mRNA; cDNA DKFZp469A0122 (from clone DKFZp469A0122).
gb:AC147427_174470366503e-05281-53223-106+255380.053322-456568-605-2615Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence.
gb:CNS07EGE_137366254551e-06281-60713-118+267325.0352-456353-380-2384chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora).
sp|P90916|RBA2_CAEEL77420.012338-6103-99+242400.011322-456337-374-2385Trp-Asp repeats containing protein RBA-2.
gb:CR380959_165387876420.009284-61024-142+264332.2355-450385-409-2419Candida glabrata strain CBS138 chromosome M complete sequence.
gb:CR380948_164935322642e-09281-61032-144+2419Candida glabrata strain CBS138 chromosome B complete sequence.
gb:AP006149_186095923634e-09233-6101-126+2410Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11.
gb:CR382124_165637134582e-07281-61015-133+2408Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:CQ887965_145488742572e-07281-61068-184+2222Sequence 43 from Patent WO2004085644.
gb:BC080146_256157746573e-07281-61018-134+2297Xenopus tropicalis hypothetical protein MGC76124, mRNA (cDNA clone MGC:89776 IMAGE:7027693), complete cds.
pir|T38386|T3838648565e-07281-61022-142+2408hypothetical wd-40 repeat protein - fission yeast (Schizosaccharomyces pombe)>gb:SPAC25H1_1717435 S.pombe chromosome I c
gb:AF297468_125995555551e-06281-61019-134+2308Schistosoma mansoni strain NMRI chromatin assembly factor 1 small subunit-like protein (RBAP48) mRNA, complete cds.
pir|T41054|T4105465512e-05281-61028-142+2430probable chromosome assembly factor, beta transducin - fission yeast (Schizosaccharomyces pombe)>gb:SPCC1672_1720982 S.p
sp|P39984|HAT2_YEAST69504e-05281-61012-129+2401Histone acetyltransferase type B subunit 2 (EC 2.3.1.48).>pir|S50533|S50533 hypothetical protein YEL056w - yeast (Saccha
sp|P90917|RBA1_CAEEL70497e-05296-60717-129+2412Trp-Asp repeats containing protein RBA-1.>pir|T23385|T23385 hypothetical protein K07A1.11 - Caenorhabditis elegans>gb:CE
gb:PFMAL1P2_139436271473e-04284-60746-162+2446Plasmodium falciparum DNA from MAL1P2.
gb:CR382125_165827773450.001281-61022-141+2417Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis.
sp|P13712|MSI1_YEAST74450.001281-61021-140+2422Chromatin assembly factor 1 P50 subunit (CAF-1 P50 subunit) (MSI1 protein) (IRA1 multicopy suppressor).>pir|S07865|BVBYM
gb:AE016818_174789975440.002281-61023-142+2417Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence.
gb:AL929302_193325032410.008325-45636-72-285Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open
gb:AE016816_174670878410.015281-60746-150+2423Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence.
gb:CR382139_167274879410.020281-60729-147+2460Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii.
gb:AY260751_252254143400.014325-45654-90-2104Oreochromis mossambicus chromatin assembly factor 1 subunit mRNA, partial cds.
gb:CR382138_167184280400.034281-61023-131+2415Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii.
gb:CR382138_167103481400.034287-40646-85+2472Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii.
gb:AX973062_148837182400.034281-38519-53+255Sequence 3865 from Patent EP1104808.
gb:BC015123_197496252390.024325-456317-353-2365Homo sapiens, Similar to retinoblastoma-binding protein 4, clone IMAGE:3686783, mRNA, partial cds.
sp|O14021|PRW1_SCHPO83380.17281-43928-82+2431RbAp48-related WD40-repeat protein prw1.>pir|T38471|T38471 probable chromatin assembly factor - fission yeast (Schizosa
gb:BC086398_210958584360.64114-27242-105+3346Rattus norvegicus CSX-associated LIM, mRNA (cDNA clone MGC:105665 IMAGE:7303205), complete cds.
gb:CR382128_166090085351.1281-61029-145+2409Yarrowia lipolytica chromosome B of strain CLIB99 of Yarrowia lipolytica.
gb:BX571965_79186886351.484-227583-629-1740Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence.
gb:MMGT10_211510887333.2114-27242-105+3194M.musculus En-2/lacZ junction mRNA (Gt10).
gb:BC004777_208978288333.2114-27242-105+3375Mus musculus RIKEN cDNA 2410043F08 gene, mRNA (cDNA clone MGC:7174 IMAGE:3257486), complete cds.
gb:AF513359_206728089333.2114-27242-105+3375Mus musculus CSX-associated LIM (Cal) mRNA, complete cds.
pir|A38203|A3820390333.2114-27242-105+3194proline-rich protein - mouse (fragment)
gb:CR382130_166340566325.0328-456406-441-2452Yarrowia lipolytica chromosome D of strain CLIB99 of Yarrowia lipolytica.
gb:CP000010_86518591327.084-227583-629-1740Burkholderia mallei ATCC 23344 chromosome 1, complete sequence.
gb:AE016816_174654992329.2117-2241875-1910+31963Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence.
gb:AY070416_156681468316.5339-45546-84+3295Arabidopsis thaliana putative membrane associated protein (At4g21450) mRNA, complete cds.>gb:AY087306_1572339 Arabidopsi
gb:AF100656_124119469316.5374-4547-33+2615Caenorhabditis elegans cosmid F49F1, complete sequence.
gb:AF386507_50615770316.5304-4531580-1620-24898Streptomyces lavendulae complestatin biosynthetic gene cluster, complete sequence.
gb:AE013179_28993071316.517-13379-117-1284Thermoanaerobacter tengcongensis MB4, section 206 of 244 of the complete genome.>gb:AE008691_1111995 Thermoanaerobacter
pir|T33699|T3369972316.5374-4547-33+21041hypothetical protein F49F1.8 - Caenorhabditis elegans
pir|T05153|T0515373316.5339-45546-84+3293hypothetical protein F18E5.70 - Arabidopsis thaliana>gb:ATCHRIV55_1545982 Arabidopsis thaliana DNA chromosome 4, contig
gb:AC116920_120641575318.5300-410963-1003+33095Dictyostelium discoideum chromosome 2 map 4415041-4520361 strain AX4, complete sequence.