Clone JMFF049B01 [sequences]

previous contigF:006614 contigR:010871
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AY024357_15590101943e-18449-628450-509-2524Arabidopsis thaliana floral homeotic protein HUA1 (HUA1) mRNA, complete cds.
gb:AC069474_15409052943e-18449-628254-313-2328Arabidopsis thaliana chromosome 3 BAC T2E22 genomic sequence, complete sequence.
gb:AB024033_15157813943e-18449-628252-311-2326Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MBK21.
gb:BC019429_20929114865e-16413-598454-514-2526Mus musculus cDNA clone MGC:30371 IMAGE:5149920, complete cds.
gb:AP002897_18236625764e-13449-619402-458-2462Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09.
gb:AP002897_18236616764e-13449-619401-457-2461Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09.
pir|T06698|T066987621e-08452-586195-238-2448hypothetical protein T29H11.40 - Arabidopsis thaliana>gb:ATT29H11_1555656 Arabidopsis thaliana DNA chromosome 3, BAC clo
gb:AP005492_18527998603e-08470-595145-186-2711Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0077L03.
gb:AP002525_18224099582e-07446-607129-178-2466Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0462H08.
pir|C84920|C8492010572e-07473-604195-238-2553hypothetical protein At2g47850 [imported] - Arabidopsis thaliana>gb:AC005309_1532461 Arabidopsis thaliana chromosome 2 c
pir|T01114|T0111411573e-07473-580122-157-2453hypothetical protein At2g32930 [imported] - Arabidopsis thaliana>gb:AC003033_1531000 Arabidopsis thaliana chromosome 2 B
gb:BT020223_164261812558e-07455-586185-227-2435Arabidopsis thaliana At5g63260 mRNA, complete cds.>gb:BT020443_1642838 Arabidopsis thaliana At5g63260 mRNA, complete cds
gb:AB008265_151040913558e-07455-586185-227-2435Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDC12.
gb:BT004106_163720714543e-06479-5927-44-2151Arabidopsis thaliana clone RAFL15-27-H11 (R20987) unknown protein (At2g47850) mRNA, partial cds.
gb:AY048253_156171415543e-06473-595123-163-2404Arabidopsis thaliana At1g04990/F13M7_1 mRNA, complete cds.>gb:AY113065_1578225 Arabidopsis thaliana At1g04990/F13M7_1 mR
pir|F86183|F8618316543e-06473-595115-155-2396hypothetical protein [imported] - Arabidopsis thaliana>gb:AE005172_889520 Arabidopsis thaliana chromosome 1, top arm com
gb:AP002525_182242017535e-06401-583116-179-2447Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0462H08.
gb:AP002525_182241918535e-06401-583145-208-2476Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0462H08.
gb:AK117978_181598319535e-06473-583123-159-2397Arabidopsis thaliana At3g02830 mRNA for putative zinc finger protein 1 (zfn1), complete cds, clone: RAFL19-18-D10.
gb:ATAC018363_154368420535e-06473-583103-139-2377Arabidopsis thaliana chromosome III BAC F13E7 genomic sequence, complete sequence.
gb:ATAC011623_154332121535e-06446-583115-160-2437Arabidopsis thaliana chromosome III BAC F24P17 genomic sequence, complete sequence.
pir|T48874|T4887422535e-06473-583123-159-2424zinc finger protein 1 [imported] - Arabidopsis thaliana>gb:AF138743_1771388 Arabidopsis thaliana zinc finger protein 1 (
gb:BT010886_164083223526e-06425-583137-190-2465Arabidopsis thaliana At5g18550 gene, complete cds.
gb:AY084634_156972224521e-05443-56519-59-2354Arabidopsis thaliana clone 113763 mRNA, complete sequence.
gb:AB005242_150952225521e-05443-56540-80-2368Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQK4.>gb:AF138872_1771391 Arabidopsis thaliana zinc finger prot
gb:AP003451_182965026511e-05479-583253-287-2322Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413C03.
gb:AP003451_182964927511e-05479-583370-404-2439Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413C03.
gb:AY573063_161575928511e-05479-57134-64-2207Oryza sativa (japonica cultivar-group) zinc-finger transcription factor (Zinc) mRNA, complete cds.>gb:AY620413_1618335 O
pir|T48868|T4886829511e-05443-56528-68-2417zinc finger protein [imported] - garden pea>gb:AF160977_1773385 Pisum sativum zinc finger protein mRNA, complete cds.
pir|G86418|G8641830390.074479-56553-81-2321probable zinc finger protein, 78337-80281 [imported] - Arabidopsis thaliana>gb:AE005172_891807 Arabidopsis thaliana chro
pir|B86419|B8641931390.096464-565129-162-2287probable zinc finger protein, 86473-88078 [imported] - Arabidopsis thaliana>gb:AE005172_891810 Arabidopsis thaliana chro
gb:CR382132_166493632380.16449-562115-152-2210Yarrowia lipolytica chromosome F of strain CLIB99 of Yarrowia lipolytica.
gb:BC083870_210893233360.48455-60718-64-2417Rattus norvegicus makorin, ring finger protein, 2 (predicted), mRNA (cDNA clone MGC:95133 IMAGE:7128406), complete cds.
gb:BC066091_210571534360.48458-541252-279-21335Mus musculus expressed sequence AW494914, mRNA (cDNA clone MGC:90116 IMAGE:6841207), complete cds.
gb:BC065169_210557535360.48458-541305-332-21388Mus musculus expressed sequence AW494914, mRNA (cDNA clone MGC:90052 IMAGE:6831314), complete cds.
gb:BC062952_210509436360.48458-541252-279-21335Mus musculus expressed sequence AW494914, mRNA (cDNA clone MGC:77974 IMAGE:6853031), complete cds.
gb:AK053628_117049937360.48458-541305-332-21025Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130116A07 product:weakly similar to
gb:AK011295_115631038360.48455-60718-64-2416Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610002L04 product:makorin, ring
gb:AK009515_115518539360.48455-60718-64-2363Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310026N20 product:makorin, ring finger p
sp|Q9ERV1|MKR2_MOUSE40360.48455-60718-64-2416Makorin 2.>gb:AF277171_2061264 Mus musculus Makorin RING zinc-finger protein 2 (Mkrn2) mRNA, complete cds.
gb:AF277164S7_189440541360.62428-60718-73-2416Homo sapiens Makorin RING zinc-finger protein 2 (MKRN2) gene, exons 7, 8 and complete cds.>gb:AF302084_1895785 Homo sapi
gb:AF161555_115044842360.62428-60718-73-2416Homo sapiens HSPC070 mRNA, complete cds.
sp|Q9H000|MKR2_HUMAN43360.62428-60718-73-2416Makorin 2 (HSPC070).>gb:BC015715_1975262 Homo sapiens makorin, ring finger protein, 2, mRNA (cDNA clone MGC:16931 IMAGE:
gb:AY658784_21477941351.137-19541-97+1308Synthetic construct Peudomonas aeruginosa clone FLH047312.01F PA4124 gene, partial cds.
pir|E83129|E831292351.137-19541-97+1307homoprotocatechuate 2,3-dioxygenase PA4124 [imported] - Pseudomonas aeruginosa (strain PAO1)>gb:AE004829_58359 Pseudomon
gb:BC060778_198568944350.81458-541203-230-2556Homo sapiens DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57, mRNA (cDNA clone IMAGE:30338933), complete cds.
gb:AK057423_191203045350.81458-541203-230-2433Homo sapiens cDNA FLJ32861 fis, clone TESTI2003589.
gb:SPBC337_171994746350.81461-550206-235-2377S.pombe chromosome II cosmid c337.
pir|T40265|T4026547350.81461-550185-214-2356hypothetical zinc-finger protein - fission yeast (Schizosaccharomyces pombe)
gb:AX971584_148689348351.1455-60718-64-291Sequence 2387 from Patent EP1104808.
gb:AE005172_89003649351.1467-544273-298-2836Arabidopsis thaliana chromosome 1, top arm complete sequence.>gb:AC005489_1532716 Genomic sequence for Arabidopsis thali
gb:WSDCUANSA_2103763342.5243-4977-79+3355W.succinogenes dcuA and ansA genes.
pir|S74204|S742044342.5243-4977-79+3355C4-dicarboxylate membrane transport protein A - Wolinella succinogenes (fragment)
gb:AE017349_175863650342.4476-598227-267-2483Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence.
gb:SPCC1906_172114751342.4413-54174-117-2379S.pombe chromosome III cosmid c1906.
gb:AY088484_157350352342.4443-553150-186-2540Arabidopsis thaliana clone 7104 mRNA, complete sequence.
gb:AY080846_156853853342.4443-553150-186-2540Arabidopsis thaliana unknown protein (At3g51950) mRNA, complete cds.
pir|T49074|T4907454342.4443-553150-186-2540hypothetical protein F4F15.60 - Arabidopsis thaliana>gb:ATF4F15_1550661 Arabidopsis thaliana DNA chromosome 3, BAC clone
sp|O74463|YQC1_SCHPO55342.4413-54174-117-2547Hypothetical protein C1739.01 in chromosome III.>pir|T41213|T41213 probable zinc finger protein SPCC1906.05 - fission ye
gb:BX571862_7858465333.234-19540-97+1292Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 4/17.
gb:AF346500_5032836333.234-19540-97+1292Photorhabdus luminescens strain W14 toxin complex pathogenicity island 1, partial sequence.
sp|O34245|DCUA_WOLSU7334.2243-53385-174+3433Anaerobic C4-dicarboxylate transporter dcuA.>gb:WSAJ2933_210358 Wolinella succinogenes aspA, dcuA genes and partial ansA
gb:BC077593_25602958335.5230-322236-266-2523Xenopus laevis MGC83958 protein, mRNA (cDNA clone MGC:83958 IMAGE:6862423), complete cds.
gb:EC4HPADNA_1247719335.534-19540-97+1283E.coli hpa[G,R,E,D,F,H,I,X,A,B,C] genes.
gb:AE005674_7396610335.534-19540-97+1283Shigella flexneri 2a str. 301, complete genome.>gb:AE016993_374022 Shigella flexneri 2a str. 2457T section 16 of 16 of t
pir|AB0215|AB021511335.534-22840-108+12853,4-dihydroxyphenylacetate 2,3-dioxygenase (EC 1.13.11.15) [imported] - Yersinia pestis (strain CO92)>gb:AE013856_300843
pir|S12962|S1296212335.534-19540-97+1276protocatechuate 3,4-dioxygenase (EC 1.13.11.3) - Escherichia coli>gb:ECHPCBD_126007 E.coli hpcB and hpcD gene for 3,4-di
sp|Q05353|HPCB_ECOLI13335.534-19539-96+12753,4-dihydroxyphenylacetate 2,3-dioxygenase (EC 1.13.11.15) (Homoprotocatechuate 2,3-dioxygenase) (HPC dioxygenase).
gb:HUMU2AF1RA_203796256333.1473-544176-199-2479Homo sapiens U2AF1-RS1 mRNA, complete cds.
gb:BC050451_198435357333.1473-544176-199-2487Homo sapiens U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, mRNA (cDNA clone IMAGE:6499970), partial cds.
sp|Q62377|U2R2_MOUSE58333.1473-544175-198-2462U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit related-protein 2 (U2(RNU2) small nuclear RNA auxilla
sp|Q15696|U2R2_HUMAN59333.1473-544171-194-2482U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit related-protein 2 (U2(RNU2) small nuclear RNA auxilla
sp|Q15695|U2R1_HUMAN60333.1473-544176-199-2479U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit related-protein 1 (U2(RNU2) small nuclear RNA auxilla
gb:FRNINE1_257204361334.0473-544173-196-2605Fugu rubripes U2 small nuclear ribonucleoprotein auxiliary factor subunit-related protein (U2AF1-RS2), 19 kDa Golgi adap
gb:S69507_213902462334.0473-541163-185-2428U2afbp-rs=U2 small nuclear ribonucleoprotein auxiliary factor binding protein homolog [Mus musculus=mice, ssp. musculus,
gb:BC086322_210951763334.0473-541164-186-2428Rattus norvegicus cDNA clone MGC:105652 IMAGE:7301896, complete cds.
gb:AK030552_116206064334.0473-541163-185-2428Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330430M06 product:U2 small nucl
sp|Q64707|U2R1_MOUSE65334.0473-541163-185-2428U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit related-protein 1 (U2(RNU2) small nuclear RNA auxilla
gb:GGRNAIBRF_257339214327.2230-316234-262-2503G.gallus mRNA for transcription factor IBR/F.
gb:BC044537_254883915327.2230-316235-263-2514Danio rerio nuclear respiratory factor 1, mRNA (cDNA clone MGC:55915 IMAGE:3818994), complete cds.
gb:AF087671_247246316327.2230-316235-263-2504Danio rerio transcription factor mRNA, complete cds.
gb:BC005410_208984217327.2230-316234-262-2534Mus musculus nuclear respiratory factor 1, mRNA (cDNA clone MGC:5646 IMAGE:3496661), complete cds.>gb:BC083931_2563344 X
gb:HSNRF1S9_201921818327.2230-316234-262-2504Human nuclear respiratory factor 1 (NRF-1) gene, exon 9 and complete cds.
gb:BC016925_197580019327.2230-316234-262-2522Homo sapiens nuclear respiratory factor 1, mRNA (cDNA clone MGC:21233 IMAGE:4397528), complete cds.
gb:PFCRPOBC_139415520327.225-12067-98-3697Plasmodium falciparum circular DNA rpoB and rpoC genes for beta and beta-prime subunits of RNA polymerase (EC 2.7.7.6).
gb:AK082580_117358821327.2230-316234-262-2503Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230066G05 product:nuclear respira
gb:AK037697_116489522327.2230-316234-262-2529Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130038J21 product:nuclear respirato
gb:AK031103_116229723327.2230-31665-93-2334Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930405C14 product:nuclear respirat
gb:AK014494_115799724327.2230-316234-262-2503Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:4432414E03 product:nuclear respiratory
gb:BX936398_83628425327.234-22840-108+1285Yersinia pseudotuberculosis IP32953 genome, complete sequence.
sp|P21421|RPOB_PLAFA26327.225-120394-425-31024DNA-directed RNA polymerase beta chain (EC 2.7.7.6).>pir|S72282|RNZQBF DNA-directed RNA polymerase (EC 2.7.7.6) beta cha
sp|Q9WU00|NRF1_MOUSE27327.2230-316234-262-2503Nuclear respiratory factor-1 (NRF-1) (Alpha palindromic binding protein) (Alpha-pal).>gb:AF098077_2054403 Mus musculus n
sp|Q16656|NRF1_HUMAN28327.2230-316234-262-2503Nuclear respiratory factor-1 (NRF-1) (Alpha palindromic binding protein) (Alpha-pal).>pir|A54868|A54868 nuclear respirat
sp|Q90X44|NRF1_BRARE29327.2230-316235-263-2504Nuclear respiratory factor 1 (Nrf-1) (Not really finished protein).>gb:AL590150_2503674 Zebrafish DNA sequence from clon
gb:AF061983_247135666326.9416-541165-206-2276Xenopus laevis CCCH zinc finger protein C3H-4 (C3H-4) mRNA, complete cds.
pir|T31491|T3149167329.0422-562123-165-2196hypothetical protein Y116A8C.19 - Caenorhabditis elegans>gb:CEY116A8C_1369380 Caenorhabditis elegans YAC Y116A8C, comple