Clone JMFF046E02 [sequences]

previous contigF:001978 contigR:001978
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
pir|F96593|F9659311816e-4555-5911-181+11624e-09231-467110-189-3189hypothetical protein F7A10.20 [imported] - Arabidopsis thaliana>gb:AE005173_893402 Arabidopsis thaliana chromosome 1, bo
gb:BT004174_163727221811e-4455-5701-174+13593e-08231-467110-188-3188Arabidopsis thaliana clone RAFL15-47-C07 (R20936) unknown protein (At3g13720) mRNA, complete cds.>gb:BT004952_1637898 Ar
gb:AY088623_157363931811e-4455-5701-174+14593e-08231-467110-188-3188Arabidopsis thaliana clone 8544 mRNA, complete sequence.
gb:AP001307_182110841641e-3955-5701-174+12601e-08231-464111-188-3188Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MMM17.
gb:AC130732_174095861454e-3455-5791-183+18492e-05234-467117-192-3193Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence.
gb:AP003244_182611851462e-3455-5641-187+19454e-04279-467125-187-3192Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0419B01.
pir|H86311|H8631171371e-3155-5821-178+17501e-05261-467110-178-3180F11A6.4 protein - Arabidopsis thaliana>gb:AE005172_890736 Arabidopsis thaliana chromosome 1, top arm complete sequence.>
pir|T00733|T0073381202e-2667-57017-187+15593e-08231-467123-205-3209hypothetical protein F22O13.28 - Arabidopsis thaliana>gb:AE005172_889883 Arabidopsis thaliana chromosome 1, top arm comp
gb:AY088496_157351591187e-26115-57034-187+16571e-07231-467123-204-3209Arabidopsis thaliana clone 7188 mRNA, complete sequence.
gb:AY054569_1563223101124e-24109-57629-186+112430.002231-467120-204-3209Arabidopsis thaliana putative protein (At3g56110; F18O21_70) mRNA, complete cds.>gb:AY064659_1566106 Arabidopsis thalian
gb:AC096855_1736363121111e-2316-57659-242+110448e-04267-467176-242-3265Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence.
pir|T47728|T47728111124e-24109-57629-186+113430.002231-467120-204-3209hypothetical protein F18O21.70 - Arabidopsis thaliana>gb:ATF18O21_1549201 Arabidopsis thaliana DNA chromosome 3, BAC clo
gb:ATH249727_1552141161071e-2288-57624-188+114420.003240-467122-203-3216Arabidopsis thaliana mRNA for prenylated Rab receptor 2 (pra2 gene).
gb:AK175728_1817716131093e-23109-5762-159+118400.015267-46793-159-3184Arabidopsis thaliana mRNA, partial cds, clone: RAFL22-27-E17.
gb:AB010692_1511111171071e-2288-57625-189+115420.003240-467123-204-3217Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18I23.>gb:AK175650_1817638 Arabidopsis thaliana mRNA for puta
pir|G84828|G84828141093e-23109-57631-188+119400.015267-467122-188-3213hypothetical protein At2g40380 [imported] - Arabidopsis thaliana>gb:AC007020_1535044 Arabidopsis thaliana chromosome 2 c
gb:AY789531_1628462151071e-2252-57616-200+121370.098267-467134-200-3220Oryza sativa (indica cultivar-group) prenylated Rab acceptor protein 1 (Pra1) mRNA, complete cds.
gb:AC135924_1742864181072e-2252-57616-200+122370.13267-467134-200-3220Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence.
gb:AC093713_173610021995e-2082-56448-209+116410.007279-464150-209-3230Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence.
pir|T02509|T02509191011e-20109-57639-196+125370.13240-467130-211-3220hypothetical protein At2g38360 [imported] - Arabidopsis thaliana>gb:AC004683_1532055 Arabidopsis thaliana chromosome 2 c
gb:AB023029_151531324929e-1861-5679-173+117410.007276-467110-173-3186Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K24C1.
gb:AE005173_89344722958e-1973-59710-185+123370.13276-464113-175-3187Arabidopsis thaliana chromosome 1, bottom arm complete sequence.>gb:AC002328_1530237 Genomic sequence for Arabidopsis th
pir|T48482|T4848223942e-18112-56730-183+124370.13231-467120-204-3216hypothetical protein T28J14.50 - Arabidopsis thaliana>gb:AB010697_1511213 Arabidopsis thaliana genomic DNA, chromosome 5
pir|T48185|T4818525929e-18109-57639-196+120380.057201-464131-212-3223hypothetical protein F7A7.160 - Arabidopsis thaliana>gb:ATF7A7_1550916 Arabidopsis thaliana DNA chromosome 5, BAC clone
pir|T09929|T09929201001e-2088-48994-227+1272hypothetical protein T16L4.170 - Arabidopsis thaliana>gb:ATCHRIV71_1546887 Arabidopsis thaliana DNA chromosome 4, contig
gb:AY086858_157190026911e-17106-5644-156+1182Arabidopsis thaliana clone 28606 mRNA, complete sequence.
pir|A86174|A8617427911e-17106-5644-156+1182hypothetical protein [imported] - Arabidopsis thaliana>gb:AE005172_889443 Arabidopsis thaliana chromosome 1, top arm com
gb:AC136520_174325832440.002394-58837-100-211440.001270-46742-106+3245Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence.
gb:AE014187_93878179342.1385-5221023-1068-226341.1321-4581023-1068+35561Plasmodium falciparum 3D7 chromosome 14 complete sequence.>gb:AE014821_1227857 Plasmodium falciparum 3D7 chromosome 14 s
gb:AE014298_112510294334.7391-5348-53-227332.4309-4528-53+3530Drosophila melanogaster chromosome X, complete sequence.>gb:AE014298_1125103 Drosophila melanogaster chromosome X, compl
gb:CR382139_167269628496e-0561-4414-132+1175Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii.
gb:AY190942_130881129473e-0470-58521-183+1186Drosophila pseudoobscura clone DPSF01_33_N22 (D1412) genomic sequence.
gb:SCYNL044W_171363330450.001100-38718-113+1176S.cerevisiae chromosome XIV reading frame ORF YNL044w.
gb:CNS07EG9_137290131450.001124-46212-120+1156chromosome II of strain GB-M1 of Encephalitozoon cuniculi (Microspora).
sp|P53633|YIPC_YEAST33440.002100-38718-113+1176YIP3 protein.>gb:SCYIP3GEN_1712556 S.cerevisiae YIP3 gene.>gb:SCYIP3PRT_1712557 S.cerevisiae mRNA for YIP3 protein.
gb:AE017352_175991134440.003103-4561-122+1163Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence.
gb:AY190939_130878735440.003157-58550-190+1193Drosophila erecta clone DERF01_42_I03 (D1420) genomic sequence.
gb:AE013599_113096336440.003157-58550-190+1193Drosophila melanogaster chromosome 2R, complete sequence.>gb:AE003831_1226716 Drosophila melanogaster chromosome 2R, sec
pir|S61100|S6110037440.003103-3871-95+1158probable membrane protein YNL044w - yeast (Saccharomyces cerevisiae)>gb:SC128LXIV_1704974 S.cerevisiae 12.8 kb DNA from
gb:AP005895_185981638430.003136-3484-71+171Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018L13.
pir|T02258|T0225839420.010186-476255-350+3407globulin1 - maize>gb:ZMU28017_1732115 Zea mays truncated globulin1 (Glb1) gene, Glb1-Hb allele, complete cds.
gb:CR382126_165852140400.02379-26411-72+1176Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:AE017341_175443641400.030169-46227-124+1163Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence.
gb:CR380953_165067842400.03082-26412-72+1176Candida glabrata strain CBS138 chromosome G complete sequence.
gb:BA000040_72840643400.03993-416368-483+3530Bradyrhizobium japonicum USDA 110 DNA, complete genome.
gb:AF452375_51235044390.05087-485223-349+3580Rhodococcus sp. I24 cosmid 3H1, partial sequence.
gb:AF365406_179161245390.066157-4413-98+1141Candida albicans YIP3-like protein (YIP3) gene, partial cds; and ribosomal protein L39 (RPL39), ribosomal protein S22 (R
gb:AP003075_182461946380.11240-37188-136+3164Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468H06.
gb:AE016817_174715247380.11133-36929-93+1176Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence.
gb:D89158_167527648380.15169-48635-140+1172Schizosaccharomyces pombe mRNA, partial cds, clone: SY 0644.
pir|T42519|T4251949380.15169-48635-140+1172conserved hypothetical protein - fission yeast (Schizosaccharomyces pombe) (fragment)
sp|Q9UUN5|YJF2_SCHPO50380.15169-48634-139+1171Hypothetical protein C306.02c in chromosome III.>pir|T41280|T41280 hypothetical protein SPCC306.02c - fission yeast (Sc
gb:BT019963_215162351370.1949-40814-127+1186Synthetic construct Homo sapiens Rab acceptor 1 (prenylated) mRNA, partial cds.
gb:HSA133534_200037852370.1949-40814-127+1185Homo sapiens mRNA for prenylated Rab acceptor 1.
gb:AF112202_188436253370.1949-40814-127+1185Homo sapiens prenylated rab acceptor 1 mRNA, complete cds.>gb:BC008950_1971715 Homo sapiens Rab acceptor 1 (prenylated),
gb:AP004136_183813054370.19156-509135-242+3334Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1287_H05.
gb:CFA534245_143856655370.1946-36313-111+1185Canis familiaris mRNA for prenylated Rab acceptor 1 (pra1 gene).
gb:AF112996_188441456370.2549-40813-126+1184Homo sapiens prenylated RAB acceptor 1 mRNA, complete cds.
gb:AF025506_205128357370.3349-40814-127+1185Rattus norvegicus prenylated rab acceptor 1 (PRA1) mRNA, complete cds.>gb:BC086387_2109576 Rattus norvegicus Rab accepto
pir|JC7369|JC736958370.3349-40814-127+1185prenylated Rab acceptor - mouse>gb:AK008559_1154649 Mus musculus adult male small intestine cDNA, RIKEN full-length enri
gb:BC068737_255523859360.43115-39932-127+1187Xenopus laevis hypothetical protein MGC81207, mRNA (cDNA clone MGC:81207 IMAGE:6318581), complete cds.
gb:BC082682_256282760360.5676-39926-127+1187Xenopus laevis hypothetical LOC494691, mRNA (cDNA clone MGC:85326 IMAGE:6875892), complete cds.
pir|S06705|S0670561360.56147-3982-82+3223hypothetical HTLV-1 related endogenous sequence HRES1 25K - human>gb:HTLV1RES_2028654 Human HTLV-I related endogenous re
gb:BC058972_210354862350.73114-30845-108+3478Mus musculus RIKEN cDNA 5330439J01 gene, mRNA (cDNA clone MGC:67221 IMAGE:5698469), complete cds.
gb:BC057055_210256363350.73114-308369-432+3736Mus musculus RIKEN cDNA 5330439J01 gene, mRNA (cDNA clone MGC:67344 IMAGE:5717322), complete cds.
gb:AP003514_183020864350.73117-380471-571+3777Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06.>gb:AP004738_1844102 Oryza sativa (
gb:AK035990_116431565350.73183-31740-81+3252Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630025C22 product:hypothetical
gb:BA000035_71569066350.73111-458303-416+3483Corynebacterium efficiens YS-314 DNA, complete genome.
gb:HS283E3_199786267351.2264-377107-147+3334Human DNA sequence from clone RP1-283E3 on chromosome 1p36.21-36.33 Contains the MMP23B gene for matrix metalloproteinas
gb:AB010962_186423268351.2264-377159-199+3386Homo sapiens mRNA for MIFR-2, complete cds.
gb:AF187965_124918569351.2195-485212-304+3399Caenorhabditis remanei alternatively spliced TRA-2A and TRA-2B (tra-2) gene, complete cds.
gb:AF187965_124918470351.2195-4851298-1390+31485Caenorhabditis remanei alternatively spliced TRA-2A and TRA-2B (tra-2) gene, complete cds.
gb:AP004750_184434571341.690-37721-133+3229Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0421H01.
gb:AP001550_182129772341.6240-37188-136+3164Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01.>gb:AP001859_1821443 Oryza sativa (
gb:AX207613_146408673341.6237-59670-172+3489Sequence 1 from Patent WO0157080.
gb:AK080627_117301774341.6180-4318-93+3222Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830030H10 product:hypothetical prot
gb:BA000030_69942475341.6276-506269-345+3719Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
gb:AP006618_55706576341.6144-458341-443+3518Nocardia farcinica IFM 10152 DNA, complete genome.
pir|T03785|T0378577341.6120-39263-165+3355L-lactate dehydrogenase (EC 1.1.1.27) - rice>gb:RICLT36RGL_1703643 Oryza sativa (japonica cultivar-group) gene for lacta
gb:AY084728_156981478342.1148-54099-230+1241Arabidopsis thaliana clone 115976 mRNA, complete sequence.
gb:AF451975_206599080332.8240-500809-906+31430Rattus norvegicus cask-interacting protein 1 (Caskin1) mRNA, complete cds.
gb:AB093272_204805781332.8240-3711239-1279+31582Mus musculus mRNA for mKIAA0910 protein.
gb:AP004041_183675782332.845-40151-180+3188Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1115_A07.
gb:AC152973_174523483332.8135-395148-233+3255Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0076M01, complete sequence.
gb:AY604200_161747184332.8201-344356-404+3457Thermoascus aurantiacus Cre1 (Cre1) gene, complete cds.
gb:AX875869_147628185332.8114-30828-91+3268Sequence 10774 from Patent EP1074617.>gb:AK001021_1908216 Homo sapiens cDNA FLJ10159 fis, clone HEMBA1003528.
sp|Q8CHC4|SYJ1_MOUSE86332.8240-3711231-1271+31574Synaptojanin 1 (EC 3.1.3.36) (Synaptic inositol-1,4,5-trisphosphate 5- phosphatase 1).
gb:AY186194_230708087333.6189-50645-153+3244Rhesus cytomegalovirus strain 68-1, complete genome.
gb:AP004300_183979888333.63-278430-519+3528Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0470D12.
gb:AF451977_190248389334.7240-368808-849+31431Homo sapiens cask-interacting protein 1 (CASKIN1) mRNA, complete cds.
gb:AB037727_186651890334.7240-368531-572+31154Homo sapiens mRNA for KIAA1306 protein, partial cds.
gb:AP004401_184122491334.7177-38627-95+3257Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03.
gb:AP003727_183253992334.793-479136-267+3832Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08.
gb:AY568670_117865093334.7213-374163-213+3364Arabidopsis thaliana basic helix-loop-helix family protein (At5g53210) mRNA, complete cds.>gb:AJ630498_1812757 Arabidops
gb:AE016959_102385495334.7187-55242-166+1212Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence.>gb:AC084763_1733718 Oryza sativa chromosome 10
pir|T05859|T0585996334.7148-36399-173+1208hypothetical protein T29A15.30 - Arabidopsis thaliana>gb:ATCHRIV67_1546635 Arabidopsis thaliana DNA chromosome 4, contig
gb:AE014188_96813628323.1327-467425-472+33896Plasmodium falciparum 3D7 chromosome 12, complete sequence.>gb:AE014849_1229528 Plasmodium falciparum 3D7 chromosome 12,
gb:GFL309022_240370597326.2141-371173-245+3309Grapevine fleck virus complete genome, isolate MT48, genomic RNA.
gb:AK026767_191070198326.2470-54460-83+2133Homo sapiens cDNA: FLJ23114 fis, clone LNG07880.
gb:AP003331_182805399326.2174-4767-99+3181Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088D01.>gb:AP003337_1828204 Oryza sativa (
gb:AC147802_1744743100326.2123-347107-180+3183Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete sequence.
gb:SCO939107_174581101326.2204-3413-43+3165Streptomyces coelicolor A3(2) complete genome; segment 4/29.
sp|O18964|SYJ1_BOVIN102326.2240-4371219-1295+31324Synaptojanin 1 (EC 3.1.3.36) (Synaptic inositol-1,4,5-trisphosphate 5- phosphatase 1) (p150) (Fragment).
gb:BC070022_2555499103328.1210-311911-944+31187Danio rerio zgc:66101, mRNA (cDNA clone MGC:85904 IMAGE:6972195), complete cds.
gb:BC056316_2551756104328.1210-311913-946+31189Danio rerio zgc:66101, mRNA (cDNA clone MGC:66101 IMAGE:6799363), complete cds.
gb:AY391453_2531589105328.173-39927-129+1190Danio rerio Rab acceptor 1 (prenylated) (RABAC1) mRNA, complete cds.
gb:AP004650_1842645106328.163-50935-172+3240Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1540_G08.
gb:AP003743_1832734107328.1141-371386-458+3608Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_E12.>gb:AP005124_1848200 Oryza sativa
gb:AK017138_1159034108328.1117-389110-204+3216Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933440N22 product:hypothetical protein,
gb:BA000030_703840109328.118-347113-230+3400Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
gb:AP006618_558513110328.1147-356170-238+3277Nocardia farcinica IFM 10152 DNA, complete genome.
pir|T28682|T28682111328.1183-48882-190+3191hypothetical protein - Streptomyces coelicolor (fragment)
pir|B36036|B36036112328.1183-389178-238+3239cytochrome P450 2F1, truncated splice form - human
gb:AE014188_96782429319.2282-461787-846+31129Plasmodium falciparum 3D7 chromosome 12, complete sequence.>gb:AE014844_1229216 Plasmodium falciparum 3D7 chromosome 12,